Os11g0482500

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0482500| Description = The stop codon is not identified.| Version = NM_001189611.1 GI:297728352 GeneID:9272616| Length = 3510 bp| Definiti...")
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Gene Name

Os11g0482500

Description

The stop codon is not identified.

Version

NM_001189611.1 GI:297728352 GeneID:9272616

Length

3510 bp

Definition

Oryza sativa Japonica Group Os11g0482500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18776761..18780270

Sequence Coding Region

18776761..18778566,18778644..18778754,18779639..18779856,18779982..18780090

Expression

GEO Profiles:Os11g0482500

Genome Context

<gbrowseImage1> name=NC_008404:18776761..18780270 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:18776761..18780270 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcgcccctccacctccgcctccgccaccgcctcccgcttcgccgccttctgggccgccgacgcgctcgccggcgacgacgccctcgacttcgccgtcaccaaggcgatggtgggcgtctccccggattccgtcagggccgcccctgaggcggtgcgggagcgcgtggcgctgcggtgcctccaggaggtcgtctccctcgcctcctccgatggcgagcgcggcgccacggcctcggccatagcggcgccgggggaggggatgcttggggtggaggacgcatcccgcacctgcgaggatttgctgcttcaactcatccgggaggttggtagctcagggagcttggagaaggatatgcttccgccctttagacaagatatccagaagtttatatgcataaagagacctacattaccagaaacttcttttgagttgctcagaaaagtttacccagagattacacctgtggttccaccatccccagtggagcagaatggaaatgaccaacacgacaatatcagccatgatcttgtgaatacagagaagaccggattcactacagatggtgctcaacttcagcaggatgatctagcaaatttagtcgatgaaagaaacacagaaaatcttcagaaggatgcaatggcaacttctgattttcaacaaccatgtacatcagacaataggtgttttgatcagcgacaagaagattctattaatactgttggtgtcaacatcaggtctccagaagacagtccaactaatgtaaatagacacatgtcagttgcagctgagccttctttagctagttctgcagatttgctgggaagtaatacaggaagaatgtctgagcaggacacgatagatcatacaaccatagttcaatcacaatcttgtggggtcagatatcctaataaacatcacagtaataatggagacatgccacttgttgccagcattcagtcaccaaaggattccatccatgaaggatcaaccatgcagacaactgtttctccagctgttgacagaagcaatgatgctttaccggcatccaacatgacccacttgcctgagtttattgctgtagaggataaaataatgacttcagaaccacacttcagcaaaactcatccaaattcagggcaacatgatactggtgataaagcaaatcaagatgtgggttgtggcagtactggtattcagacagctgctgctttaccatctgaaggctttaatggggatgttcaaggagacaaatctgaaattaaagatccagcagggaatactacacagcatactgaaacttttgaacaagaaaatagtgacaaggctcatttggaagttggttgttccgacaaagttaatcaagctctatatgatgatggcaacatcataaaaaataatatggtctttggtgggctgaataagcaaactgctctagagtctcatggctgcagcatgaccttgcataacagaaattcagaggccaaccatttctctgagcagaatattggaaggaacagaactgaagttcagaatgattgctgcagtattccaacctctcctaatgatgttaatgacaagcgagcaaagcaagcttcaaacaaggaaaccatggcgaatactgtggcagaaacattgcatgtgcattcttcagatggtagtttcagtggcttcgcagctggtggtcttctgtcaatggctgaaaaactaccgttctgtactcaggatcaatatgctaatggtactgttgagggcttgtcagaacaagagttgtgcataaaatgtggcaaagatggtcagttgctgaaatgcagtggctgttttttagccgttcatgatacatgttttggctcatcagtgacatttgatgattctggtcagttctactgtcctgtatgcttctatactaaagcaactgaagcatatcaaaaggcaaagaaaacatattctgaagcaaggaagaacctatcagctttccttggtagaaagcaattggctgagcaatatcaacaagctgcagtgcggcaaagagctgccaacagtgaggatcatttcaatgggtgtaacaacgcaatcaaaaggcaaggtaatcatcaatctgaaggaaataacctttctcatagggatgaagagcctgcccgacagaggaagaagcagaagacaaatgctagggatgcttgcactcaggaagtagtcactaaaaaggcacccactgttcataactctgatgttgtatccatg</cdnaseq>

Protein Sequence

<aaseq>MPRPSTSASATASRFAAFWAADALAGDDALDFAVTKAMVGVSPD SVRAAPEAVRERVALRCLQEVVSLASSDGERGATASAIAAPGEGMLGVEDASRTCEDL LLQLIREVGSSGSLEKDMLPPFRQDIQKFICIKRPTLPETSFELLRKVYPEITPVVPP SPVEQNGNDQHDNISHDLVNTEKTGFTTDGAQLQQDDLANLVDERNTENLQKDAMATS DFQQPCTSDNRCFDQRQEDSINTVGVNIRSPEDSPTNVNRHMSVAAEPSLASSADLLG SNTGRMSEQDTIDHTTIVQSQSCGVRYPNKHHSNNGDMPLVASIQSPKDSIHEGSTMQ TTVSPAVDRSNDALPASNMTHLPEFIAVEDKIMTSEPHFSKTHPNSGQHDTGDKANQD VGCGSTGIQTAAALPSEGFNGDVQGDKSEIKDPAGNTTQHTETFEQENSDKAHLEVGC SDKVNQALYDDGNIIKNNMVFGGLNKQTALESHGCSMTLHNRNSEANHFSEQNIGRNR TEVQNDCCSIPTSPNDVNDKRAKQASNKETMANTVAETLHVHSSDGSFSGFAAGGLLS MAEKLPFCTQDQYANGTVEGLSEQELCIKCGKDGQLLKCSGCFLAVHDTCFGSSVTFD DSGQFYCPVCFYTKATEAYQKAKKTYSEARKNLSAFLGRKQLAEQYQQAAVRQRAANS EDHFNGCNNAIKRQGNHQSEGNNLSHRDEEPARQRKKQKTNARDACTQEVVTKKAPTV HNSDVVSM</aaseq>

Gene Sequence

<dnaseqindica>1705..3510#1517..1627#415..632#181..289#actcgcatcccggcccatccgcctcgtcagcggcggcgcaccaccatccccacccccaccctcctcgccggcgtcttcaccaggcgctccgcctccacgtcggccacctcgtcggcgtccggttgctccacccgcccaccaaactcgccgcccaccacccccaccaccgcgtaaccgcaaatgccgcgcccctccacctccgcctccgccaccgcctcccgcttcgccgccttctgggccgccgacgcgctcgccggcgacgacgccctcgacttcgccgtcaccaagggtagatccaccccccccccctcctctctcgcgcgcgctctcgtttgcgtccgtttcttcttcttcttcttcttccttgtctcacactctcacctagggtttgccttgcccgccttgcccccgcagcgatggtgggcgtctccccggattccgtcagggccgcccctgaggcggtgcgggagcgcgtggcgctgcggtgcctccaggaggtcgtctccctcgcctcctccgatggcgagcgcggcgccacggcctcggccatagcggcgccgggggaggggatgcttggggtggaggacgcatcccgcacctgcgaggatttgctgcttcaactcatccgggaggtgaggtattcggcgcaacgcattgacatatttgcctcattcgatcaagtattaagtattcgtttactggaaaactctgcaattcgtttcaaactattcgtgaagacaaggtgatccccattcgcatggttgggtacatttcttgaataatagggttattggtagcttggttcagacaccctttctatgttttgagctcatccattccagtgatatgaaacggcattttcaccctttgacttgtaatctgctcagcaccttttgaagaatatgtgcttagatgaaccttcagatctctaaccaatgagttgttcactgatgcatgtttattatgtgcaacattgctaggcaagacccagatgttttctgagctcaagcattctggtgatatgaacatgatattacctctagcattttttgtcttacgtattcccaattgattttggtacctttgctctagttatatatagcatatgcttatgaagtctcaaaagatcattgttgctgggaaagggggtatactgtggtaaatgttatttttcacatgattattggtggcctgagtgctccatgaatgctttaatttgtgcagggaaaaggggaggctgtgctaatttttttttaagaaaagaactgtgggattgatataaatatattgctagctgtgttaaatattgttcctcacatgattatgcatgtatctactgtcacccttttaatttttttgttgtttgcttgtgattaaacctgttttttctctgtgaaacaatattatgcatatggtttattcaagtttcgaagctagtgtgctgcaatttgtctgtaataccttcctggtgtccagataattttgaggtttactttacataatgtaaaattttcaggttggtagctcagggagcttggagaaggatatgcttccgccctttagacaagatatccagaagtttatatgcataaagagacctacattaccagaaacttcttttgagttggtatgttaaaatgctgtctttcacatctgaagaaaggacttctgttaaaattagtgtgctgcttgttttatgttcagctcagaaaagtttacccagagattacacctgtggttccaccatccccagtggagcagaatggaaatgaccaacacgacaatatcagccatgatcttgtgaatacagagaagaccggattcactacagatggtgctcaacttcagcaggatgatctagcaaatttagtcgatgaaagaaacacagaaaatcttcagaaggatgcaatggcaacttctgattttcaacaaccatgtacatcagacaataggtgttttgatcagcgacaagaagattctattaatactgttggtgtcaacatcaggtctccagaagacagtccaactaatgtaaatagacacatgtcagttgcagctgagccttctttagctagttctgcagatttgctgggaagtaatacaggaagaatgtctgagcaggacacgatagatcatacaaccatagttcaatcacaatcttgtggggtcagatatcctaataaacatcacagtaataatggagacatgccacttgttgccagcattcagtcaccaaaggattccatccatgaaggatcaaccatgcagacaactgtttctccagctgttgacagaagcaatgatgctttaccggcatccaacatgacccacttgcctgagtttattgctgtagaggataaaataatgacttcagaaccacacttcagcaaaactcatccaaattcagggcaacatgatactggtgataaagcaaatcaagatgtgggttgtggcagtactggtattcagacagctgctgctttaccatctgaaggctttaatggggatgttcaaggagacaaatctgaaattaaagatccagcagggaatactacacagcatactgaaacttttgaacaagaaaatagtgacaaggctcatttggaagttggttgttccgacaaagttaatcaagctctatatgatgatggcaacatcataaaaaataatatggtctttggtgggctgaataagcaaactgctctagagtctcatggctgcagcatgaccttgcataacagaaattcagaggccaaccatttctctgagcagaatattggaaggaacagaactgaagttcagaatgattgctgcagtattccaacctctcctaatgatgttaatgacaagcgagcaaagcaagcttcaaacaaggaaaccatggcgaatactgtggcagaaacattgcatgtgcattcttcagatggtagtttcagtggcttcgcagctggtggtcttctgtcaatggctgaaaaactaccgttctgtactcaggatcaatatgctaatggtactgttgagggcttgtcagaacaagagttgtgcataaaatgtggcaaagatggtcagttgctgaaatgcagtggctgttttttagccgttcatgatacatgttttggctcatcagtgacatttgatgattctggtcagttctactgtcctgtatgcttctatactaaagcaactgaagcatatcaaaaggcaaagaaaacatattctgaagcaaggaagaacctatcagctttccttggtagaaagcaattggctgagcaatatcaacaagctgcagtgcggcaaagagctgccaacagtgaggatcatttcaatgggtgtaacaacgcaatcaaaaggcaaggtaatcatcaatctgaaggaaataacctttctcatagggatgaagagcctgcccgacagaggaagaagcagaagacaaatgctagggatgcttgcactcaggaagtagtcactaaaaaggcacccactgttcataactctgatgttgtatccatg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0482500, RefSeq:Os11g0482500