BGIOSGA003572

From RiceWiki
Revision as of 10:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003572| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003572, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003572

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003572, complete gene.

LocusTag

OSJNBB0093M23.1

Ensembl Transcript ID

BGIOSGA003572-TA

Ensembl Protein ID

BGIOSGA003572-PA

Length

4636

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:17839476..17844111

Sequence Coding Region

17839476..17839656,17840864..17841016,17841551..17842074,17842152..17842274,17842469..17842582
,17842804..17842966,17843516..17844111

Genome Context

<gbrowseImage1> name=IndicaChromosome01:17839476..17844111 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:17839476..17844111 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGGCTCTTCTTCGTCCTGGTCTACCCCAAGCTTTGGGTTAGCCAGGGAATCCTCTTCATTGTTGTTTACACCTGGCCTTGTGCAACACATGGGTCCTAATCCATCGTCATCTTGGTCCACCCCTGCTCATCCAGTCTCTGATAGTCCCACGTTTTCTTTCCCCACGCCATTTTTCTGTGAGCCTGCGAAAGGCAGCAGGGTCTATGCTTATACCAAGACTGCTGATGATCTTCCTCATAAGCATACACTATCAATTTCTGCAATGCCAGCATACATAAGCAAATCCCATGAGGAGCTTCGACATGAAGATTATCAGAGAGGAGACAAAGGCGGTGATGGCCTGCAGAAAATTATGGTTAATTCAGCTCCTGTACCTCCCATGCCCATGTTATCGTCTGTTGGAGCTCCAGTTAACATGATCAATTCAAGTCAACCTGCTTTCAGTTTGAAGTCCAAAACAAATTTCAGTACTCCATTTTCACCAGCAGCAACTGCTGATCAACAATCTGCACAGCTACAGTTCTCAACACAAAATCACTATTATACTTCCAACCCATTTTGGCCTGCCCCAATAGGATCGGTGCGACCATGTTCATCAACTGGACTGCAATCTTCCACGCCAGGTCTAAACTGTACTGGCATCACATCATTTCCATTCCTGCCCACAAAGCAACCGTCTGTGGGAACCCAATCATCAACTTTATTTCCTACCACTTTTGTGCATCCATCCGTGGAGTTGCAAAAGAATGCCTCCACCCACTGTGCTAGCTCACAGACTGCTCCTTGTACGACACACGGAGGAATTCTATTCGGCACGGCTGCAAATACAGTCTCATTAACTACATCATCTACTGAGCCAACTACATCATCCCTTGGTCCAACCTCATGCCCTGCTACTCGACATGGAGATGCACCTTCTACTGGATTTGCATGTCAGGAAAATGTATTCAGCAACTCAGCGGCATATACATCTACTATAAATGCGGATGTTCCCACGAATACCATAGATTTGCTACTTCCAAATAACATCCGGCTGGTAAGGCTTAGATTTTCTTCAACAAATGATGGTAATGGAAGTGTTGCTTCAGAGGTTCATTGTCATCATGATGCTAAAACTTCAGAAACACCCATTTCTTTGTGTATATATCCTGGAGAGAACCAAGAGCTGATTATCAAATCAATGGTGCAGCCTGCTAAGAGTCACACTGGGAAACAATCTAGTCCAACCGGTGGTCATCCAGATGATCAAAGTGGTCGCAGCAAAGTATGCAACAGTGCTGCTGGTCCGCCATCGTCAGGACCTGGTGAGAATCAGAAGGGGAATAGCAGTGCTGGTCACAAGACACCAAAGTCTCCACTGGCTGCTCCTCGTTGCGAAGCGATAGCGGAGTCTGTACTGCCTCGCCTGTACAGCGCCGATTACTACACCGTGCCATCTATTGTGGAGCTCGCCGTGAGAGAGAGGGACGAGCCAGGCTATTGCTCACATGTGAAGGGCTTCACGGTCGGCAGGCATGGCTATGGCAGCGTAAAGTTTGATGGAGAAACTGATGTGAGAAAGCTTGATATTGGATCCATCGTGGAGTTCAATGAGCGTGAGATTATCGTGTACAGAGATGTGAGCAATACGCCGGCTGTTGGGCAGGAACTCAACAAGCCTGCAGAAGTCACTCTTCTGAATGTCAAGTGCGTCGAACAGAAGAATGGGTTGCAGTTCACAGAGGGGCCGGCAGTTGATAGGTACAAGGAGATTTTGGTGCAGTGGACAAAGGACCATGGCGCAGAATTTGTGTCATTTGACGCGGCCAAGGGAGAATGGAAGTTCAGGGTTAAGAATTTCAATATGTAG</cdnaseq>

Protein Sequence

<aaseq>MMGSSSSWSTPSFGLARESSSLLFTPGLVQHMGPNPSSSWSTPAHPVSDSPTFSFPTPFFCEPAKGSRVYAYTKTADDLPHKHTLSISAMPAYISKSHEELRHEDYQRGDKGGDGLQKIMVNSAPVPPMPMLSSVGAPVNMINSSQPAFSLKSKTNFSTPFSPAATADQQSAQLQFSTQNHYYTSNPFWPAPIGSVRPCSSTGLQSSTPGLNCTGITSFPFLPTKQPSVGTQSSTLFPTTFVHPSVELQKNASTHCASSQTAPCTTHGGILFGTAANTVSLTTSSTEPTTSSLGPTSCPATRHGDAPSTGFACQENVFSNSAAYTSTINADVPTNTIDLLLPNNIRLVRLRFSSTNDGNGSVASEVHCHHDAKTSETPISLCIYPGENQELIIKSMVQPAKSHTGKQSSPTGGHPDDQSGRSKVCNSAAGPPSSGPGENQKGNSSAGHKTPKSPLAAPRCEAIAESVLPRLYSADYYTVPSIVELAVRERDEPGYCSHVKGFTVGRHGYGSVKFDGETDVRKLDIGSIVEFNEREIIVYRDVSNTPAVGQELNKPAEVTLLNVKCVEQKNGLQFTEGPAVDRYKEILVQWTKDHGAEFVSFDAAKGEWKFRVKNFNM</aaseq>

Gene Sequence

<dnaseqindica>1..181#1389..1541#2076..2599#2677..2799#2994..3107#3329..3491#4041..4636#ATGATGGGCTCTTCTTCGTCCTGGTCTACCCCAAGCTTTGGGTTAGCCAGGGAATCCTCTTCATTGTTGTTTACACCTGGCCTTGTGCAACACATGGGTCCTAATCCATCGTCATCTTGGTCCACCCCTGCTCATCCAGTCTCTGATAGTCCCACGTTTTCTTTCCCCACGCCATTTTTCTGTAAGCAACCTTTTCTTTCATCTTTCTGTTCTCCCTTTCTTTTTGTGCTCTTTCATACCTGCCAACTTTATAAAAAATTAACAACATGATAGGTGCAAGTTCTTACCTACAAACAGCTCATTTTCCTGTTTATGCGTGTTTGTGCTTGTGAATTCCTGTTCTTCTCTATAGTACAAATTTCTATTATGTGTTCTAATGCTTCAAGATATCATCAAGTAGATTTTTTGGTTTGGTTATAGTATCTGTGTTGCACATCAAATCTATAAGTCCAATTAATGTAGGAAAGCCTCGTAATCACAACAGTTTTGAGCTTCTTGCACATATTTTTTTTAGTTCGTCTGGTCACATACTATATTTTTATTAATCAGAACGAATTGATGCTTCATATTTCTAATGTAGTCGTCCAATAGTTTTTGTTGATGAATGTCCTGTGGTAATACATCTTGAATGCTCAAAAACTGGCTGGTTTTTTCTAATTGGGCCAGGCTCAAAAACATCTTGATGCAAACAATTTGCTGAACCCCAGAATAAACCACCGCAGTATTATATTGTATTAGGCACCTATTGTCTTCCCAAACATCCATAGTGAATGTTCAAAATTGTAGTTAACTGTTATCTTACTCACCTTGGAGAACCTCTGAGCTAGTAGTACTGATGTCAATGGTGGATGATGCCACCCTGATTACCAATATTTAATATGCAGTGGTTGCTCCTGTTTAGAGTACCTTATGTATGTCTATCTTTGATGTTTATCCTTGGTCGCACAGACCCCTTGTTTAGCTTGGGTTGAAAGTGCTAATACACTGGAAGGATTTCACCTACTTTATGTCTCTGAGCATTTGTTTTTAAGATTGTGAGGAAGATGCACATGCACATACCTGTCTGAGTGTCCCCCTTAGCACATACTTGAACTTATGGAGGTTAGGGATGAATCTGTCTACCTCACAAAAAATGTATTGAAGCGTGCAAGTGTGCACATGAATGCATTCACTAGGATTTGAACCATGGTAGGTGAGTCATACACCTTCTCCACCTCTGTGATTGGTTAATTGATTATAAGGCAATTTTGATACTAATCTATTTTTTCATGGTGGCATGGCTTAAAATTTGACATGTTCCATTTTTTTCACTTTGTAAATTTCTTCTCCCATTTCACTTCATCTAGTTCACTTCATTTTTTTTGTATTTTTCCATCGTAATTATATAGGTGAGCCTGCGAAAGGCAGCAGGGTCTATGCTTATACCAAGACTGCTGATGATCTTCCTCATAAGCATACACTATCAATTTCTGCAATGCCAGCATACATAAGCAAATCCCATGAGGAGCTTCGACATGAAGATTATCAGAGAGGAGACAAAGGTATAAGTGTTTGAAGCATTTTTCTGAACTTTAGACTTGTCTATGAAATTTGATGAGTTAGAATTTGGATAATGCGATCTTTAAAGAAAGCAGTGACATGTCACTACATTTTGGAGTAAACTCTTTCTTTGTTCCTAGAATTTGATTGCATCCCTTGTTTGCGCTTGCATCCTTTATTATTAGCCTAATGTTACACCAAAAGACAAATTACATAGCTATTTCAATAGTTATCTAGAGCATCTTTACAACTTACTGAGTTCACGCGTCCATTTCTCTCTAGTTATTTAATCTGAAGCATCTTTACAACTTATTAGCCAGAATAGTTAACTATTGATATTTTTTTCTCTAGTATTTGCATGTACAATTAAACAGCTAATGTGAGCAATAAGCCTATAGTTCTAATAATTAATGCTTAGAGTTAGTATTAATGGATCATTTCCTGTGATGATTTATGTTTAATATTTTGTTGGCACATTTGCTAAATGTTTGTTCCTTTTCTATGTATTAATCTAATTTTATTTGTTAACTCTCTAGGCGGTGATGGCCTGCAGAAAATTATGGTTAATTCAGCTCCTGTACCTCCCATGCCCATGTTATCGTCTGTTGGAGCTCCAGTTAACATGATCAATTCAAGTCAACCTGCTTTCAGTTTGAAGTCCAAAACAAATTTCAGTACTCCATTTTCACCAGCAGCAACTGCTGATCAACAATCTGCACAGCTACAGTTCTCAACACAAAATCACTATTATACTTCCAACCCATTTTGGCCTGCCCCAATAGGATCGGTGCGACCATGTTCATCAACTGGACTGCAATCTTCCACGCCAGGTCTAAACTGTACTGGCATCACATCATTTCCATTCCTGCCCACAAAGCAACCGTCTGTGGGAACCCAATCATCAACTTTATTTCCTACCACTTTTGTGCATCCATCCGTGGAGTTGCAAAAGAATGCCTCCACCCACTGTGCTAGCTCACAGACTGCTCCTTGTACGACACACGGAGGAATTCTATTCGGCACGGCTGCAAATACAGTCTCATTAACTACATCATCTACTGTAAGTTCCTTAAATCATGGCTTGTTTGTGAACAAAACAAATTGGCTCTAATCATTGATATTTGTGTTGGTTGACAGGAGCCAACTACATCATCCCTTGGTCCAACCTCATGCCCTGCTACTCGACATGGAGATGCACCTTCTACTGGATTTGCATGTCAGGAAAATGTATTCAGCAACTCAGCGGCATATACATCTACTGTAAGTGTTGCTGTTGACTGTAGTATTTATTTGCGGTGCAGTACAAGAGGAACTACTATGCATGATTATTTTCCGTTATCTTTGTTTCTCAGAGGAGGCATAAATCAAAACTTCTTCCCACCTTCAAATGTAGCAAATCCATCGCTCGTTTTTCCAGACTCTGCTTTATATGAGAAAGATAATCTTCTTTGCAGATAAATGCGGATGTTCCCACGAATACCATAGATTTGCTACTTCCAAATAACATCCGGCTGGTAAGGCTTAGATTTTCTTCAACAAATGATGGTAATGGAAGTGTTGCTTCAGAGGTACGGAACTGAATCTCCATAGTAAAGAGTTGCTCTGCACATTATTATGCATGAGTCTTTCATAAAATGATCTCTTGGCCCCTGTGGCTTCTAAAATCATGTTGGAAGCTTTGATGCTTTACATCCTTGGTCTCATTACTATTTAGAATGAAATGACTTTGACCTTTATGTCTATTCATTCTGATGGTCATATAATAACATAACCATGTCCCTTTTTGTAGGTTCATTGTCATCATGATGCTAAAACTTCAGAAACACCCATTTCTTTGTGTATATATCCTGGAGAGAACCAAGAGCTGATTATCAAATCAATGGTGCAGCCTGCTAAGAGTCACACTGGGAAACAATCTAGTCCAACCGGTGGTCATCCAGATGATCAAAGTGGTAATTAGTGTTTGCATTTCATTCCTTCTGATATATGTTTCAGACAAACAGTTTCTCTACTGACTCATATGTACAGTATGATTACATCATTTATTTATTTTATTACTCCCTCCATCCCATAATATAAGGCATAGTCAAACTTGGCACGGTTTTCAAACCTAATCTTTGACTTATATTTTCTCATATACTATAAGGTTTATTGCAACAAAATTATAACCATCTTAAAGTAAATTTAAATGTCAATCCAAAGATATTAATTTTAGGAAATAAAATTTAATTTATAGTATTATAACAATTGTTGGTCAAGTATTTTTAAAGTTGAATCTTGGACTGCGTGCACGTCTTATATTATGAGATAGAGGAAGTAGCAATTAAGGAGCAAAAATATGATCACTGAAGTGTGGTGTAATTTAATGTTAGGGATATCTGTTGTGAGTAGTGAAAAATACATTATCATTTCTAAAGATTTATCTAAAGATATTCCTATAAATGTAAAGGTATCTCAGAACTGAACACTTATCATACAAGTTCGATTTTTGGTTACTTCAGGTCGCAGCAAAGTATGCAACAGTGCTGCTGGTCCGCCATCGTCAGGACCTGGTGAGAATCAGAAGGGGAATAGCAGTGCTGGTCACAAGACACCAAAGTCTCCACTGGCTGCTCCTCGTTGCGAAGCGATAGCGGAGTCTGTACTGCCTCGCCTGTACAGCGCCGATTACTACACCGTGCCATCTATTGTGGAGCTCGCCGTGAGAGAGAGGGACGAGCCAGGCTATTGCTCACATGTGAAGGGCTTCACGGTCGGCAGGCATGGCTATGGCAGCGTAAAGTTTGATGGAGAAACTGATGTGAGAAAGCTTGATATTGGATCCATCGTGGAGTTCAATGAGCGTGAGATTATCGTGTACAGAGATGTGAGCAATACGCCGGCTGTTGGGCAGGAACTCAACAAGCCTGCAGAAGTCACTCTTCTGAATGTCAAGTGCGTCGAACAGAAGAATGGGTTGCAGTTCACAGAGGGGCCGGCAGTTGATAGGTACAAGGAGATTTTGGTGCAGTGGACAAAGGACCATGGCGCAGAATTTGTGTCATTTGACGCGGCCAAGGGAGAATGGAAGTTCAGGGTTAAGAATTTCAATATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003572