Os11g0484300

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0484300| Description = Similar to Mcm2-prov protein| Version = NM_001074442.1 GI:115485532 GeneID:4350526| Length = 5965 bp| Definition = ...")
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Gene Name

Os11g0484300

Description

Similar to Mcm2-prov protein

Version

NM_001074442.1 GI:115485532 GeneID:4350526

Length

5965 bp

Definition

Oryza sativa Japonica Group Os11g0484300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18873414..18879378

Sequence Coding Region

18873496..18873498,18873583..18873830,18874544..18874731,18875212..18875408,18875498..18875687
,18875784..18876003,18876088..18876295,18876427..18876561,18876644..18876835
,18876918..18877090,18877185..18877373,18877458..18877574,18877653..18877737
,18877819..18877971,18878054..18878179,18878310..18878492,18878742..18878903
,18879017..18879133

Expression

GEO Profiles:Os11g0484300

Genome Context

<gbrowseImage1> name=NC_008404:18873414..18879378 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:18873414..18879378 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgactcggagaacaacgcgccgtcgacgccggggtcgccggggttcagcacagacaggctgccgccgaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacgacgacgacgacgacgtggttggcgcggaggaggcggaggtcgaccccaacgtgctccccgaggacgacggcgtcgtcgccgccgaggaggaggaggacggggaggacctcttcaacgacaactacctcgatgattaccggaggatggatgagcaggaccagtatgaatcggttgggttagatgactcgatagaggatgaaaggaacctggatgagatcatggcagatagaagggctgctgaagcagaacttgatgcaagggatgtgaggactggtgcagcacctgataggaaattgccacggatgctacatgatcaagacacagatgaggatatgagcttcaggcgtcctaaaaggcacagagctaattttagaccaccaagggaaccaagaacaccaagaagtgatgatgacggtgatggtgccacgcctagttcacctggaagatctcagcgtggaatgtattctggaggggatgtacctatgactgaccagactgatgatgatccatatgaggatgaatttgatgaagaagatgagatgaacatgtaccgtgtacaaggaactcttagagagtgggtcacaagagatgaagtccgccgctttatcgcaaagaagttcaaagaattccttctaacatatgtaaacccaaagaatgaacaaggagagtttgagtatgttcgactaatcaatgagatggttctagctaacaaatgcagcttagagatagattacaagcaatttatttatatacatccaaacattgctatatggttggctgatgcacctcaatcggtgctagaagttatggaggaagttgccaaaaatgttgtttttgatctccataagaactataggaacattcatcaaaaaatctatgtccgaataaccaatcttcctgtctacgaccaaatacgcaatatcaggcaaatccatctgaacacaatgattcgaattggtggtgttgttactcggagatcaggtgtttttcctcagctacaacaggtcaagtttgactgcagcaaatgtgggactgtcctgggccccttcttccagaactcttacactgaagtcaaggttggatcctgccctgagtgccaatccaaagggccattcaccatcaatgttgagcaaaccatatataggaactaccagaaactcactcttcaggaaagcccaggaattgttcctgctggcaggcttccaagatacaaggaagtgatacttctgaatgatttgattgactgtgctcgaccaggagaggaaattgaggtcactgggatatacaccaacaattttgacttgtctttgaatacaaagaatggtttcccagtttttgccacagtagtggaggcaaactatgtggcaaaaaaacaggatctgttctctgcttacaaattaactgatgaggacaaggcggagattgagaagttggcaaaagatccacggatcggtgaaaggattgtcaaatcaattgcaccatccatatatggtcatgaagatatcaagactgccattgcactagctatgtttggggggcaagagaagaatgtcaagggaaagcatcgcttgagaggagatatcaatgtactcctcttaggtgatccaggcactgcaaaatcccaatttctcaagtatgttgagaaaactggacacagagcagtgtacacaactggaaaaggagcttctgctgttggactcaccgcagcagttcacaaggatccagtaacacgggaatggacacttgagggtggtgcactagtgcttgctgatagaggcatatgccttattgatgaatttgataagatgaacgatcaagatagggtgagtattcatgaggccatggagcaacaaagtatcagtatatcaaaggccggaattgtcacatcccttcaagctcggtgcagtgttattgctgcagcaaacccaataggaggaagatatgattcatcgaagacattcacccagaatgttgaactgacggatccaattatttcacgttttgatgtcctttgtgttgtgaaggacattgttgacccatttacagatgaaatgcttgcaaggtttgttgtagatagtcatgcaagatctcaacccaagggtgctaaccttgaagatagggttccaactgatgttgaggatgatccattggctgctgccagacaagctgacccagatatcctttctcaagacatgctgaagaagtacataacttatgccaagttgaacgtgtttcccaaaattcatgatgctgacctggacaagattagccatgtttacgcagaacttcgtcgtgagtcatctcatggtcaaggagtccctattgccgtaaggcatatcgaatccattattcggatgtcagaggcacatgcaaggatgcatttgaggagctacgtgtctcaggaagatgtcgacatggctatccgcgtcctgcttgactcatttatttcaactcagaagtttggtgtacagaaagcacttcaaaagaatttcaggaaatacatgacctataagaaggattacaatgagctgctcttgcttcttctgcgcaccctggtcaaggatgtgctgcacttcgaagaaatcgtttcaggaccaacgacgcgcctgactcacatcgaggttaaagtagaggacctgaagaacaaggcccaggagtacgaaatctatgacctgagaccgttcttctccagcgcccacttcagggacaacaacttcgtcctcgacgaagggcgggggatcatcaggcaccctcttgctgcctaa</cdnaseq>

Protein Sequence

<aaseq>MDDSENNAPSTPGSPGFSTDRLPPNTTTSRGATDPSSYSDDDDD DVVGAEEAEVDPNVLPEDDGVVAAEEEEDGEDLFNDNYLDDYRRMDEQDQYESVGLDD SIEDERNLDEIMADRRAAEAELDARDVRTGAAPDRKLPRMLHDQDTDEDMSFRRPKRH RANFRPPREPRTPRSDDDGDGATPSSPGRSQRGMYSGGDVPMTDQTDDDPYEDEFDEE DEMNMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVNPKNEQGEFEYVRLINEMVLA NKCSLEIDYKQFIYIHPNIAIWLADAPQSVLEVMEEVAKNVVFDLHKNYRNIHQKIYV RITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKFDCSKCGTVLGPFFQ NSYTEVKVGSCPECQSKGPFTINVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILL NDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFATVVEANYVAKKQDLFSAYKLT DEDKAEIEKLAKDPRIGERIVKSIAPSIYGHEDIKTAIALAMFGGQEKNVKGKHRLRG DINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEG GALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAAN PIGGRYDSSKTFTQNVELTDPIISRFDVLCVVKDIVDPFTDEMLARFVVDSHARSQPK GANLEDRVPTDVEDDPLAAARQADPDILSQDMLKKYITYAKLNVFPKIHDADLDKISH VYAELRRESSHGQGVPIAVRHIESIIRMSEAHARMHLRSYVSQEDVDMAIRVLLDSFI STQKFGVQKALQKNFRKYMTYKKDYNELLLLLLRTLVKDVLHFEEIVSGPTTRLTHIE VKVEDLKNKAQEYEIYDLRPFFSSAHFRDNNFVLDEGRGIIRHPLAA</aaseq>

Gene Sequence

<dnaseqindica>83..85#170..417#1131..1318#1799..1995#2085..2274#2371..2590#2675..2882#3014..3148#3231..3422#3505..3677#3772..3960#4045..4161#4240..4324#4406..4558#4641..4766#4897..5079#5329..5490#5604..5720#agcagccactcctccccaccttactcccccccgcttccactcccccgaaccttccagaaccttctcccgctcccccgccgagatggtaagctccccttcctcttccttcagcgcggcggcggcggccggatctgacgcctcgccgtgtttttttttcttttttgggtaggatgactcggagaacaacgcgccgtcgacgccggggtcgccggggttcagcacagacaggctgccgccgaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacgacgacgacgacgacgtggttggcgcggaggaggcggaggtcgaccccaacgtgctccccgaggacgacggcgtcgtcgccgccgaggaggaggaggacggggaggacctcttcaacgacaactacctcgagtaagcgagaattcccagatctgatgttcattctagttcggttgacaagtgagatctggtttgattagaagtttgtttttgtggcttagtgggagaattagaagttttagtgtttatgttaaatatttgctttagggattggcaaatttggccgttgactggctcatataagagggattgaccaattacttgactaaattgtgtactttttggtcaaagaattttaagtacgattttttactgtagtggtgctacagatacttcgatggtgtagaagcaaacaactcttagcctactgtgttctgtcacagtgaaatgtccacgaagttctttcattttgattagataatctcttgctctgtttaattacctataggtttgttaattttggtttacatgtgtaaattagttgagggatttgttgatcacttcgcctgttgccttgatgcttattctgttaagttatgtagttggcacaataaacggatacaatacatttggctgttaatttgcctaattgatattgtttgaattaacggtcctcttgctacacagtttcttttagcagttcagtacaaagggactacctgtctttataaatccatgaaacattataaaactctcaagtcaatgcaaactcgtcagatgttgcaagttattgttaaattccacagttttgattaacatattgcatcttttccctccttttatagtgattaccggaggatggatgagcaggaccagtatgaatcggttgggttagatgactcgatagaggatgaaaggaacctggatgagatcatggcagatagaagggctgctgaagcagaacttgatgcaagggatgtgaggactggtgcagcacctgataggaaattgccacggatgctacatgatcaaggtaatggcattgtgaaaaattgcatttccatgagatattagaactgaaccccacctttctgctgttgtactttatattcttgttacttgagaatttgagatatgttaatttgatatggttagctttagtcgaatgctatgttttaatgcttcttgggtcaactatatgtaactgaggttgtatactccatttgcatttgcttcttttaagtctgattcaacccgtagtgtggttgtgaattttgagttttggacttcagtgatgattttttcttaaatattcaatatggagcatcacattactgaatatattatctgagtttgacattgtggtatggttgtgaacttgcagtagtaatcctttctatatttactaaaattagtttgcttgaaacttgtttattctttctatgagatattctttctggtcagttggtcttggtaattgtaagttgaagatagtgtttcttttatggtgcagacacagatgaggatatgagcttcaggcgtcctaaaaggcacagagctaattttagaccaccaagggaaccaagaacaccaagaagtgatgatgacggtgatggtgccacgcctagttcacctggaagatctcagcgtggaatgtattctggaggggatgtacctatgactgaccagactgatgatgatccatatgaggtattgatgtttgaactaaaattaccttaagttcctttagattttccaattggtcgccgtcctatttgctgagcatattttatatgcaggatgaatttgatgaagaagatgagatgaacatgtaccgtgtacaaggaactcttagagagtgggtcacaagagatgaagtccgccgctttatcgcaaagaagttcaaagaattccttctaacatatgtaaacccaaagaatgaacaaggagagtttgagtatgttcgactaatcaatgagatggttctaggtatgattctcttttcctttttgcatgaaaaaaggccacatttgttggcattgtaagaaatgcttgcttacctaatgtttcctctcctctttgcagctaacaaatgcagcttagagatagattacaagcaatttatttatatacatccaaacattgctatatggttggctgatgcacctcaatcggtgctagaagttatggaggaagttgccaaaaatgttgtttttgatctccataagaactataggaacattcatcaaaaaatctatgtccgaataaccaatcttcctgtctacgaccaaatacgcaatatcaggtcagtacatgctttctttagtatggtatttagaagtcaaattgattgattgtctgtgcttatatgctacttgccaaatttcaggcaaatccatctgaacacaatgattcgaattggtggtgttgttactcggagatcaggtgtttttcctcagctacaacaggtcaagtttgactgcagcaaatgtgggactgtcctgggccccttcttccagaactcttacactgaagtcaaggttggatcctgccctgagtgccaatccaaagggccattcaccatcaatgttgagcaagtaagttgcctgggacgatggtagttctgatacatttgggctttcttctctgtcttaatgcatgaacatgtttttggttctaatattcaaactgttctcttttaataacagttgatttatttgtctcacagaccatatataggaactaccagaaactcactcttcaggaaagcccaggaattgttcctgctggcaggcttccaagatacaaggaagtgatacttctgaatgatttgattgactgtgctcgaccaggagaggaaattgtaagtcttctgcatgtaccttttttatttctacatcttattgtagaaagcatgttctaattgactatctgcccatgttcaggaggtcactgggatatacaccaacaattttgacttgtctttgaatacaaagaatggtttcccagtttttgccacagtagtggaggcaaactatgtggcaaaaaaacaggatctgttctctgcttacaaattaactgatgaggacaaggcggagattgagaagttggcaaaagatccacggatcggtgaaagggtttgtgcttaatccttaagccccttgactcaattataataagctaatcagtattgtctgacaaatgacttattgtttacagattgtcaaatcaattgcaccatccatatatggtcatgaagatatcaagactgccattgcactagctatgtttggggggcaagagaagaatgtcaagggaaagcatcgcttgagaggagatatcaatgtactcctcttaggtgatccaggcactgcaaaatcccaatttctcaagtaaggaataggcaatcagtttcatcatctctctttttattgctccattaactcaatatttcattatctaaaaaattaactcactgttttgtaggtatgttgagaaaactggacacagagcagtgtacacaactggaaaaggagcttctgctgttggactcaccgcagcagttcacaaggatccagtaacacgggaatggacacttgagggtggtgcactagtgcttgctgatagaggcatatgccttattgatgaatttgataagatgaacgatcaagataggtatgtgtaataccatttggataatgtgtgcttttaagcatttatgttctattgccctaagatatctttctcttattgtttcagggtgagtattcatgaggccatggagcaacaaagtatcagtatatcaaaggccggaattgtcacatcccttcaagctcggtgcagtgttattgctgcagcaaacccaataggaggaaggtgatgtgatctacttgctcaggatgttttcaaacaattgttttgagcaatatacttaattttatcatgttattgcagatatgattcatcgaagacattcacccagaatgttgaactgacggatccaattatttcacgttttgatgtcctttgtgttgtgaaggtttggagctgattttgctgtgtaatatatttttgcagtcctggtatctatctgtactgattttttctggtgcaaatgcaggacattgttgacccatttacagatgaaatgcttgcaaggtttgttgtagatagtcatgcaagatctcaacccaagggtgctaaccttgaagatagggttccaactgatgttgaggatgatccattggctgctgccagacaagctgacccagatgtacgaaccctttgtacttcgcacaacagaaacatttttttactaaatttcattgtttttaacaaaatcctatattttttagatcctttctcaagacatgctgaagaagtacataacttatgccaagttgaacgtgtttcccaaaattcatgatgctgacctggacaagattagccatgtttacgcagaacttcgtcgtgagtcatctgtaagatatccttgtttcttgtccatatcaaatgcatcttatcaaatacttaaatatcttgccgaattggatattgatacctatgaaaactggaaaccaacatgatatccaacctattttcttgtttcagcatggtcaaggagtccctattgccgtaaggcatatcgaatccattattcggatgtcagaggcacatgcaaggatgcatttgaggagctacgtgtctcaggaagatgtcgacatggctatccgcgtcctgcttgactcatttatttcaactcagaagtttggtgtacagaaagcacttcaaaaggtaaattttgattttgctgttgtattgctattctatcatcttccaactgatgcatacctagcatgagtttgaactgttgtaagctgccttagttttttagcaaatgttacttgcattatgcggtctattacttgctgaactcattccgagctcaaacctatgccccttcctttctttgttttcaccaatgtaactgtagttcctcaccatttctgcaaattttaaagtatgtttcttctgcctctacagaatttcaggaaatacatgacctataagaaggattacaatgagctgctcttgcttcttctgcgcaccctggtcaaggatgtgctgcacttcgaagaaatcgtttcaggaccaacgacgcgcctgactcacatcgaggttaaagtagaggacctgaagaacaaggtatgagccaagatctccgcctcacccacacgcctttctaaccaagcttattgcgcaaaaatgcttcgtcatccagatttcgctcttgattccggtacatctgtctgatgcaggcccaggagtacgaaatctatgacctgagaccgttcttctccagcgcccacttcagggacaacaacttcgtcctcgacgaagggcgggggatcatcaggcaccctcttgctgcctaactacagaagatcatctgtgacccatctgacaatgaacaatttgagctacctcatgggattatcagacatagtgtaatcatcaaatggcaactcctttgtgctttttagagactgttgcatgttatccagctgcatttggatagggtgtaccgtgtgtactttcttaacattgtaattctgcaagtatggtagaaaatgataaatctgtgtcaatcaatgtatcattgttttgcattattgttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0484300, RefSeq:Os11g0484300