BGIOSGA003676

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Revision as of 10:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003676| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003676, complete gene.| tag = B1147B0...")
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Gene Name

BGIOSGA003676

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003676, complete gene.

LocusTag

B1147B04.18

Ensembl Transcript ID

BGIOSGA003676-TA

Ensembl Protein ID

BGIOSGA003676-PA

Length

3302

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21143459..21146760

Sequence Coding Region

21143459..21143641,21143749..21143921,21144012..21144084,21144200..21144274,21144400..21144510
,21144618..21144663,21144757..21144820,21145482..21145584,21145671..21145766
,21145858..21145887,21146106..21146205,21146433..21146517,21146637..21146760

Genome Context

<gbrowseImage1> name=IndicaChromosome01:21143459..21146760 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:21143459..21146760 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCTGGCACCACCCTCGCCCCCAAGCGCCGCAAGGCAGAGGCGTCCCCTTCCCCTTCCCCTTCCCCTATGGGGGATTCTTCCGACGGCGGCTACAGCGACTCCGACCTCCACGACGCCGAGGAAAGCTTCTACTCCGCGAGGAGCGGCTCCGAGGACGACCGCCAAGTTTCCTCCAGCAACGACGACGACGATAGCGAGGAGGAGGAGCAAGAGGAGCGGGAGATGGATGAGGAGGAGGACGAAGAGGATGATGATGATGATGAGGAGATGAATGAGGAGGATGACGAGGATGAGGGGGAGGAGATGAACGAGCTCGAGAAGGAGTACCGCACGCTCCAGACCAATCAACAAAATATTTTGGAGACATTGAAACAGCACAGAGATGACGATGTTTCGAAGGGCCAGGCGGTCAAAAATCAAAAGGTGTTGTGGGACAAGGCACTCGAGATGAGATTCTTGCTGCAAAAGGCATTTTCCACTTCAAACAAATTGCCCAAGGAACCCATCAGGTCGATGTTTTGTGATCACAATCAGGAGATAGAGCAAGCTTATCTTGATCTGTTGAATTCATCGAAGCAGACTCTTGGTTCCATGATGGAGCTTCAGGAGGCCTTGCTGGAGAGGAATCGTGCTACAAAGGATGTAACTGATACTGATAATTCTTCAGAGTTGAATGGAGAGGATGATGAGTGGTCAGAAGTTCAGAAATTGCAGAAAAGGATAACTCCGTTCAGAAATAGTGAGATAGATAAATGGCAGAGGAAAACACAAGTGACAACCGGTGCTGCTGCATTGAAGGGAAAGTTGCATGCTTTTAATCAGAATATAAGTGACCAAGTTACTAGTTACATGAGAGACCCAAGCAGGATGATTAACAGGATGCACTTGAGAAAATCTACCCTCGGTGTATTTGGGGAGGAAGTGGGAGAGCATGAAAACAATAAGGAGGAGAACAATACGGAAGGTGATCCTGAACTTGTTGACGATTCTGAATTTTACCAACAACTTCTAAAGGAGTTTCTTGAGTCATGTGATGCAGGCGCATCTGAGTCAGCATTTTATGCTCTAAAGAAGCAGCAGCATAAAAAGAGAAAACTGGTTGATCGTCGTGCTTCGAAGAGCAGAAAGATAAGATACCATGTCCACGAGAAGATTGCAAATTTCATGGCCCCAGTACCCATGGTTATTCCTCCAATGGCTCCAAAATTGTTTGAGAATTTGTTTGGGATGGGAAACCAAAAGTCGACCACAGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPGTTLAPKRRKAEASPSPSPSPMGDSSDGGYSDSDLHDAEESFYSARSGSEDDRQVSSSNDDDDSEEEEQEEREMDEEEDEEDDDDDEEMNEEDDEDEGEEMNELEKEYRTLQTNQQNILETLKQHRDDDVSKGQAVKNQKVLWDKALEMRFLLQKAFSTSNKLPKEPIRSMFCDHNQEIEQAYLDLLNSSKQTLGSMMELQEALLERNRATKDVTDTDNSSELNGEDDEWSEVQKLQKRITPFRNSEIDKWQRKTQVTTGAAALKGKLHAFNQNISDQVTSYMRDPSRMINRMHLRKSTLGVFGEEVGEHENNKEENNTEGDPELVDDSEFYQQLLKEFLESCDAGASESAFYALKKQQHKKRKLVDRRASKSRKIRYHVHEKIANFMAPVPMVIPPMAPKLFENLFGMGNQKSTTA</aaseq>

Gene Sequence

<dnaseqindica>1..183#291..463#554..626#742..816#942..1052#1160..1205#1299..1362#2024..2126#2213..2308#2400..2429#2648..2747#2975..3059#3179..3302#ATGGCGCCTGGCACCACCCTCGCCCCCAAGCGCCGCAAGGCAGAGGCGTCCCCTTCCCCTTCCCCTTCCCCTATGGGGGATTCTTCCGACGGCGGCTACAGCGACTCCGACCTCCACGACGCCGAGGAAAGCTTCTACTCCGCGAGGAGCGGCTCCGAGGACGACCGCCAAGTTTCCTCCAGCGTAAAGCTCGATCTCTCTCGTCCTCCTATCCCCCCCTTCTCTCTCTCTCTGTTTGCTCCAATCTTTTGAGCTTCAATCGTCTGCCTGTGCTTGTCCCTGGTCATCAGAACGACGACGACGATAGCGAGGAGGAGGAGCAAGAGGAGCGGGAGATGGATGAGGAGGAGGACGAAGAGGATGATGATGATGATGAGGAGATGAATGAGGAGGATGACGAGGATGAGGGGGAGGAGATGAACGAGCTCGAGAAGGAGTACCGCACGCTCCAGACCAATCAACAGTAAATTACCCCCCTTCCCTTGTATACTTTTGTGCTGTTCTGCCTGTTCTAACTGAGAGAGAACTTGTAAACCGAAATAAAATCTTGTAGAAATATTTTGGAGACATTGAAACAGCACAGAGATGACGATGTTTCGAAGGGCCAGGCGGTCAAAAATCAAAAGGTACCAACACCCACTTAGCTCTGATCACCAATCGCTGACTCATATTCATGTTTATACGCTGCTCTCCTTAGATTTGCTCGCATTCCATAATTTGATCTATCTTTGAACTCCAAAGGTGTTGTGGGACAAGGCACTCGAGATGAGATTCTTGCTGCAAAAGGCATTTTCCACTTCAAACAAATTGCCCAAGGTTTATCTCTTTATCTGTTGCAACAAACTTCTTTCTTGCTTTATCTTCATTGTTTTTTTTTTCCTTCCAAAGAATGCGGGGTTGTAGATCACATTTCAAATTGATCCTTTGTTGTGTTACTGCAGGAACCCATCAGGTCGATGTTTTGTGATCACAATCAGGAGATAGAGCAAGCTTATCTTGATCTGTTGAATTCATCGAAGCAGACTCTTGGTTCCATGATGGAGCTTCAGGAGGTTTGATCGATTGCTTTTGTTTTTGCAGTTTAATGCAATGTTGTTGTATGGTATAGTTACCCAAGGTTTTTTCTAATGTACAATAACACTTTGAAAACAACCGGCAGGCCTTGCTGGAGAGGAATCGTGCTACAAAGGATGTAACTGATACTGGTACCATTCATGTTCTTTCTGGTTCTAGCATAAAATTGTTTGGAGTACCTTTGTACCGTATATATGCTAATTAATCCCATGACTAAATGACAGATAATTCTTCAGAGTTGAATGGAGAGGATGATGAGTGGTCAGAAGTTCAGAAATTGCAGAAAAGGTATGTTTTGCGTCTTTGTTTTAGCTGTAACCATAATGAGAAGTATTGTGAGATGTTATGCCTTAAATCTGTTATGATATATTATATGGTATTACAGCTTTATCTATTGAAACTGTCCTGTTCTACACCTGTATGTTTGCTACATGGTGGTATTTTTTTTTCATATGCTTCAAATGGATCAGCAGAATTCTTCTCTAGACCATTGTGGATTAATGGATGATCTCATATAAGGTGCTTAGATTTAGGTAGTGTTCTATAGGGATTCATTCATTCATACAGTACGTCTTGGTTTTATCCTCTCGGCATGTTTGGACCACTTATCACTGTTAATCGGTGAATTTTACATTGTGTTACAAATTTCGAAGAAAGGAAAAGGAAATTGTTTCTGCCACATAGCATCAACTGTTTGCAAACTTATGGGGTACCTAACATAAATAAAGGTATTGTAAATTAATAATATAACTATGACTGATCCTATGGATGCACAAAATAATATGAGGGCTCTAATTTTTTTTTGGGTGGTGTGTGTGTGCGCGCGCGCGCGTGGGTGGGGGATTGACGGAAACTGAGGCAGGCTTCTTTTCTTAACAGAACAAAAGAGGGGAGAGAGAGACTTGTACAGTGATATATTAATAATTTAACATCAACCTTTTTAATACAGGATAACTCCGTTCAGAAATAGTGAGATAGATAAATGGCAGAGGAAAACACAAGTGACAACCGGTGCTGCTGCATTGAAGGGAAAGTTGCATGCTTTTAATCAGGTTGCTTGAATTCCTATCTGACTATTTGTAATTAATTTCCTGTGAACATGACTAAATCTTTGCTTCTTTCCATTGTATGGTAACAGAATATAAGTGACCAAGTTACTAGTTACATGAGAGACCCAAGCAGGATGATTAACAGGATGCACTTGAGAAAATCTACCCTCGGTGTATTTGGGGAGGTAACTTGAGATGCATCTAGTACTATAAATGATCACTGGTCATGTTTCAGTACCTAATGATAAGTTTGTAACTATTGCTATATGTGTGCAGGAAGTGGGAGAGCATGAAAACAATAAGGAGGTTTGTACAATAATTTATTCTTCCCTTAACTCTAGTTCTAGCTTACTTGCTTCTCCTTTGAAGTATTCAAATGCTCTAATTGTATTGTACAGTAGGTCCTTTGTCCCCTTGTGATTAAAATTCCTGTTACTATATTTTAGCTTTAAATCATTGATCATAATGATTAACAATGGTATTATTGTTATTCCTGGTCTCATGTGTTCTTGATGTCAACCTAGGAGAACAATACGGAAGGTGATCCTGAACTTGTTGACGATTCTGAATTTTACCAACAACTTCTAAAGGAGTTTCTTGAGTCATGTGATGCAGGCGCATCTGGTTAGTTAAATCTTACCTGCTGCACTTCTGCAACATATTTCTTTGGAGAACTCTGCATGCTGCTCTGCACTAGTCACCTGAAGGGATTTTAGTAGCCTTGAATTCACAGGCTACCTCTTGTAGTTGCCTTCTACTCAGTGAACAATATTTCACTAATCATTCTAAGGATCTAGTATCTTTCTCTTTGAACACTGGAGCATCTATCAAGTGTTCTTCTACATTTGCAGAGTCAGCATTTTATGCTCTAAAGAAGCAGCAGCATAAAAAGAGAAAACTGGTTGATCGTCGTGCTTCGAAGAGCAGAAAGATAAGGTACAGTATAGGTTTCCTTCTCTCTCTTTTTTTTCTTTGCGGGGAAGTATTGGTTTCCCTTGCTCTGTCCGTCAATATCTATTTGTGTTAACTTGTTTACTGTTATGTGGTTTATTCAGATACCATGTCCACGAGAAGATTGCAAATTTCATGGCCCCAGTACCCATGGTTATTCCTCCAATGGCTCCAAAATTGTTTGAGAATTTGTTTGGGATGGGAAACCAAAAGTCGACCACAGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003676