BGIOSGA003680

From RiceWiki
Revision as of 10:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003680| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003680, complete gene.| tag = OsI_022...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003680

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003680, complete gene.

LocusTag

OsI_02256

Ensembl Transcript ID

BGIOSGA003680-TA

Ensembl Protein ID

BGIOSGA003680-PA

Length

1733

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21347773..21349505

Sequence Coding Region

21347773..21347775,21349080..21349505

Genome Context

<gbrowseImage1> name=IndicaChromosome01:21347773..21349505 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:21347773..21349505 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATTGTTGTTGGCAATGTACGGGCTCCAGGTGCTCGCCGACGACATCCAGGACGACGCCGGGAACGTCACGCGGTTCGTCCCGCGAAACGGACCCGGCCATTCAAGACGAGCATCGTGTTCGCGCACGACAGGGAGGGCACGTCGGTGCTGTTCAAGGTGCTGTCGGCCTTCGCGTTCCGGGACATCAGCCTCACCAAGATCGAGAGCCGGCCACACCGCCACCGCCATCCCATCCAGTTCGTCGACGGCGCCAACGTGGGCACGGCCAAGCACTTCGAGTACATGTTCTACATCGACTTCCAGGCGTCCATGGCGGAGGTCCGCGCTGTCGGAGATACAGGAGTTCACCTCCTTCCTCCGCGTGCTCGGCAGCTACCCCATGGACATGACGCCATGGGAGTATTCCTCCTCATCGTCACCAGATGA</cdnaseq>

Protein Sequence

<aaseq>MIVVGNVRAPGARRRHPGRRRERHAVRPAKRTRPFKTSIVFAHDREGTSVLFKVLSAFAFRDISLTKIESRPHRHRHPIQFVDGANVGTAKHFEYMFYIDFQASMAEVRAVGDTGVHLLPPRARQLPHGHDAMGVFLLIVTR</aaseq>

Gene Sequence

<dnaseqindica>1..3#1308..1733#ATGGTTTGCCTGGTTGCTTCACTTCTATCTTCCACCGTTCTGTGTGCAGAAGGCCAGCTCAACGCCGGTCGCCGGACGACGAGCTCGGCTCCGGTGACCCGTTCGCTCTATCCCTAGCTACACGGGCAGCGTGAGCCTGCACGATGAGCTGTTTCTATTTTCTGATGGAGAAAATAGAATAATATCTTTTTGTAGAAAAATCAGATAGCTTAAGCGAAGTAGTAGCATAGGTATGTGTATATATTGTTCTGTACCAATTCCTTCCATGTAGATGAGCAGATGTATGGTACAAAACGGATGTCTATATAGTAATAAATTTGTTCATCTTTTTGGCCATGGGTGAGCTTGGATGCCTAGTTCCTGAGAAGCAATCGCCGGCGAGAACAGGGGATTAGGAGAGAGAGAGAGAGTGGGAATAGAAGGGAGATTAAAATAAAATTTCTTGTACAGTGTGGGCCATAGTAGTATAGCTTGATTATTGTGTTTACTGGCTACAATGTTACCTATAGCTGAGATGTATCAAAATTGGAGTAAGCAGTTGGCTGCACTATTATCCTTGCTCTAAGCAATTCGCCGCCTATGAGCTGCAATGAATGCGAGATAAGAGCATGTACAATAGCAGGCTATTAGCCAGCTATAAACATATTTTAATAAGATAAACGATGAGAGAGAAGAGCAGCGGGCTACAGATCTGTAGCCAGCTGCAGCACGGACTCCAAGACACACTGTGTGTATGACAGGTGGGACCATATATTAATAGTACAATAAGCAACTATGGTATAAATTGGTTTTTAGATTGGCTATAAATGAATTGGAGCTAGCAGTGGGTTGTAATATTAGACTTGCTCTAAGGGGACGGCGTGCCATATCCCAGCGTCTGGTATATCGCCTCGTTACAGCTTTATGTGGGTCCCACCGGTGTATTGCTGTAGTCAAAAGAAAATCCAAAATACATCGACCACGTCGGGAAATACTGCCGCATACTGGGGGGTACGTCCGAATCTCAAAGCCATCCTGCGGCTTGCACCCTAGGTGCCGCGGCACCTAGGTGCTGAAAAGAGTTTCCGCAATAGGGTAACGAAGACCAACCAGAAACCAACTATGAGTCCCGATACAACTCCAAAGAAAAATGGTTCGATGTGGAAACTATCTCTAGTTTTTTCTGGACTGCCTTGCTTTGGAACATCATTAGTCGAGCAATTCTTCTGAAGAGGAAAGCCATAGAGACCACTGTTTCCATTGTAGATGTCAGGATGTTCATTATAGATGCTATCAAGTTGTGTACCTGATGGTATCCTTCCTGTCAGATTGTTGTTGGCAATGTACGGGCTCCAGGTGCTCGCCGACGACATCCAGGACGACGCCGGGAACGTCACGCGGTTCGTCCCGCGAAACGGACCCGGCCATTCAAGACGAGCATCGTGTTCGCGCACGACAGGGAGGGCACGTCGGTGCTGTTCAAGGTGCTGTCGGCCTTCGCGTTCCGGGACATCAGCCTCACCAAGATCGAGAGCCGGCCACACCGCCACCGCCATCCCATCCAGTTCGTCGACGGCGCCAACGTGGGCACGGCCAAGCACTTCGAGTACATGTTCTACATCGACTTCCAGGCGTCCATGGCGGAGGTCCGCGCTGTCGGAGATACAGGAGTTCACCTCCTTCCTCCGCGTGCTCGGCAGCTACCCCATGGACATGACGCCATGGGAGTATTCCTCCTCATCGTCACCAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003680