Os11g0488050

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0488050| Description = Conserved hypothetical protein| Version = NM_001189617.1 GI:297728364 GeneID:9272549| Length = 1340 bp| Definition ...")
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Gene Name

Os11g0488050

Description

Conserved hypothetical protein

Version

NM_001189617.1 GI:297728364 GeneID:9272549

Length

1340 bp

Definition

Oryza sativa Japonica Group Os11g0488050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19030008..19031347

Sequence Coding Region

19030053..19031090

Expression

GEO Profiles:Os11g0488050

Genome Context

<gbrowseImage1> name=NC_008404:19030008..19031347 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19030008..19031347 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagatgagcagcggcggcgtcggcgtcggcggcggcggagggagcaaggtgatgtcgccgaagcaggtgctcaccgtcgtcctcgtcgtgttctgcgcgctctccttcgtcaagctgctgctcctcaccggctcctcgtcgcccgccgccgccgcgcgccgcggccgcgcctcggcgtgggggaacgggacggacgtgggggacggcggcctcgcgcccaaggaggccgcactgctccggtccgtggtcgccgcgcgcgcgccgtgccggctgctcgtgttcggcctctccccgcagctcgccgcgctcgccgcggtcaacgccggggagggcgccgccaccgcgttcgtcaccgacagcgccgaggacgccgacagcgcgcgccgctcgctccgcggcggctcggcggccgtcggcggcggcggcggccaagatccaccaggtgaggtaccgcgacgcggctggggaggcgtggccgctgctgcggcgcgcgcgggacagcccggcgtgccggcgtccgacgggggcggtgcgcaggtccggctgccacctggcgctgatcaccacgctgccgcgggaggtgctcgacgcgaggtgggacgtgctcgtcgtggacgggccgagcggcgccgccgccggggagcccggccggatgggcgccatctacacggcggcgggcgctggcgcgcgcctcggcggcgggaggccgggaggcggtggacgtcgccgtgcacgatgtgcaccgcacggtggagcggtggtacgcctgggagtacctctgcgaggacaacctcgccgccgccaagggccgcctctggcacttccgcgtcgccggcggcggcccgccggacgcgttctgctcgaccggccccgcccagatcttgtaaggatggccggaccaataaccaatgctccccggagacatcgccggttcttggcaatgcagcacacagatcccccttccatcggcatcgccggagacaggagccgttcttgaagacggcgacggcgaccgcgcagttggtttgttcatag</cdnaseq>

Protein Sequence

<aaseq>MQMSSGGVGVGGGGGSKVMSPKQVLTVVLVVFCALSFVKLLLLT GSSSPAAAARRGRASAWGNGTDVGDGGLAPKEAALLRSVVAARAPCRLLVFGLSPQLA ALAAVNAGEGAATAFVTDSAEDADSARRSLRGGSAAVGGGGGQDPPGEVPRRGWGGVA AAAARAGQPGVPASDGGGAQVRLPPGADHHAAAGGARREVGRARRGRAERRRRRGARP DGRHLHGGGRWRAPRRREAGRRWTSPCTMCTARWSGGTPGSTSARTTSPPPRAASGTS ASPAAARRTRSARPAPPRSCKDGRTNNQCSPETSPVLGNAAHRSPFHRHRRRQEPFLK TATATAQLVCS</aaseq>

Gene Sequence

<dnaseqindica>46..1083#gtgttcacaggaagaggccagatcggaggaggagcatccggatcgatgcagatgagcagcggcggcgtcggcgtcggcggcggcggagggagcaaggtgatgtcgccgaagcaggtgctcaccgtcgtcctcgtcgtgttctgcgcgctctccttcgtcaagctgctgctcctcaccggctcctcgtcgcccgccgccgccgcgcgccgcggccgcgcctcggcgtgggggaacgggacggacgtgggggacggcggcctcgcgcccaaggaggccgcactgctccggtccgtggtcgccgcgcgcgcgccgtgccggctgctcgtgttcggcctctccccgcagctcgccgcgctcgccgcggtcaacgccggggagggcgccgccaccgcgttcgtcaccgacagcgccgaggacgccgacagcgcgcgccgctcgctccgcggcggctcggcggccgtcggcggcggcggcggccaagatccaccaggtgaggtaccgcgacgcggctggggaggcgtggccgctgctgcggcgcgcgcgggacagcccggcgtgccggcgtccgacgggggcggtgcgcaggtccggctgccacctggcgctgatcaccacgctgccgcgggaggtgctcgacgcgaggtgggacgtgctcgtcgtggacgggccgagcggcgccgccgccggggagcccggccggatgggcgccatctacacggcggcgggcgctggcgcgcgcctcggcggcgggaggccgggaggcggtggacgtcgccgtgcacgatgtgcaccgcacggtggagcggtggtacgcctgggagtacctctgcgaggacaacctcgccgccgccaagggccgcctctggcacttccgcgtcgccggcggcggcccgccggacgcgttctgctcgaccggccccgcccagatcttgtaaggatggccggaccaataaccaatgctccccggagacatcgccggttcttggcaatgcagcacacagatcccccttccatcggcatcgccggagacaggagccgttcttgaagacggcgacggcgaccgcgcagttggtttgttcatagctagtgtgagctgagctaatgtgaagaattgatctttctactctttaggtactggattgatgcaattccatagctcgaactgaattccttgatggttgatgcaatgcaaagacaagcagagagtttgtaaagtgtatactagtaaaccgaattgttgttgtttcactgcctgtttgttttcttttgtttgtttggaacaataatgaagtgataatcccatttttttttaaaaaaaatattgggtttgagattgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0488050, RefSeq:Os11g0488050