Os11g0488500

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0488500| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001074452.1 GI:115485552 GeneID:4350536| Length = 3183 ...")
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Gene Name

Os11g0488500

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001074452.1 GI:115485552 GeneID:4350536

Length

3183 bp

Definition

Oryza sativa Japonica Group Os11g0488500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19033352..19036534

Sequence Coding Region

19033353..19033465,19033564..19033733,19034362..19034711,19035558..19035696,19035794..19035860
,19035942..19036080

Expression

GEO Profiles:Os11g0488500

Genome Context

<gbrowseImage1> name=NC_008404:19033352..19036534 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19033352..19036534 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tacggcgacaccgagccggccgccgccgccgccgcggagcgcacggcgttccggcgagccgagaagcagtacaagctctacaagccgctgaagcccaagggcgggagggcaaggagcaagccaggaggcggcggcggcggcggaggattggaggacctgtccgcggtggtcgacttccacgcgctgctcgctgccgccggcggcggcgggggggagctgcccgccgggatcgggaggcgcgacgtcgccgggttcgacctcttctgcttcttggaccgacctggattctatttcatacctggtgctctatctattgaggaacaatgctattggatcagggaaagcttgaaaaccttcccacagcctcctaatagaactaacctgacagctttgtatggtccaatttttgacttactcactgctgccaaaagtggaaagattttagtcgaagtgggaaatcccaatgaccaagaaagatccgagcagaacagtgatggaagaaaatccaatagcttcaaatttcttgaagacacagagatacacaagggggaggtatgcaggtcaactgcagcaactacccttgttcggaaactccgatggagtacccttggtctgcaatttgattggtcaaaacgcaactatgatgtatcacttccacataacaagattccagacctcctatctgctcttgcaaaaaagatggccattccagccatgccatctggagaggaattcaagccagaggccgccatagtgaactattatggcccaagtgacatgcttggtggccacgttgatgacatggaagcagattggagtaaacctattgtaagcataagtttggggtgcaagtgcatttttcttcttggaggcaaaacgagagatgaagttccaacagcaatgtttctgcgaagtggtgatatcgtattgatggctggggaggcacgggaatgcttccatggtaatgcattttactga</cdnaseq>

Protein Sequence

<aaseq>YGDTEPAAAAAAERTAFRRAEKQYKLYKPLKPKGGRARSKPGGG GGGGGLEDLSAVVDFHALLAAAGGGGGELPAGIGRRDVAGFDLFCFLDRPGFYFIPGA LSIEEQCYWIRESLKTFPQPPNRTNLTALYGPIFDLLTAAKSGKILVEVGNPNDQERS EQNSDGRKSNSFKFLEDTEIHKGEVCRSTAATTLVRKLRWSTLGLQFDWSKRNYDVSL PHNKIPDLLSALAKKMAIPAMPSGEEFKPEAAIVNYYGPSDMLGGHVDDMEADWSKPI VSISLGCKCIFLLGGKTRDEVPTAMFLRSGDIVLMAGEARECFHGNAFY</aaseq>

Gene Sequence

<dnaseqindica>2..114#213..382#1011..1360#2207..2345#2443..2509#2591..2729#gtacggcgacaccgagccggccgccgccgccgccgcggagcgcacggcgttccggcgagccgagaagcagtacaagctctacaagccgctgaagcccaagggcgggagggcaaggtctcgatccctctccctctccttccccctctctccccctgtccacacgcatccatccatccatctatctagccgccctgacctctgcagcgctgcaggagcaagccaggaggcggcggcggcggcggaggattggaggacctgtccgcggtggtcgacttccacgcgctgctcgctgccgccggcggcggcgggggggagctgcccgccgggatcgggaggcgcgacgtcgccgggttcgacctcttctgcttcttggaccgacctggtaaaatctgggagctccaccattcgcttcacagttcgatttctcgattgttcatggcggctagtttgggagcttcggatttttgatcaccctatcatactccatagatgctttcttggcatactacttgcttattatttttatatatactcttttagcacctaatgtattttgattcaagtattgttttgggtatactactactttgcttgttatactcgcaacattgcttgatttgtatgtgatcacaacagtgtgttacttttgtcatgattgctctggtagcagcaagataccaaatccttggtgtgattcattcctggatgccatcttactacctatgtaacatatgctagacttgtattgttattatacctttgatggaggcatagagctcactctgaaatttaagataagtttggtcatttagaataaatccagaaagaaagatggtgcgcaagctgcaacaaatattatgtagtctatttgattataattcaactaatacattgctcaatttaatattgattcttcacatcgtacattgcacttcctattggtcatatttctaaaaaaaatcataatgtttgtgacacttaatgatatccttcttgtgttaattttgtaggattctatttcatacctggtgctctatctattgaggaacaatgctattggatcagggaaagcttgaaaaccttcccacagcctcctaatagaactaacctgacagctttgtatggtccaatttttgacttactcactgctgccaaaagtggaaagattttagtcgaagtgggaaatcccaatgaccaagaaagatccgagcagaacagtgatggaagaaaatccaatagcttcaaatttcttgaagacacagagatacacaagggggaggtatgcaggtcaactgcagcaactacccttgttcggaaactccgatggagtacccttggtctgcaatttgattggtcaaaagtatgtcccttgagcttcgatgccagttttatactagatctttatgttgttttctcttgtttgattgaactattccagcttgtagtgcttttgatattgtctagtgatacttaagtaatagatagattttacctttccattaggatttctgcaattgttccagtcatgctgaattcatttcaatcttggtattattatgaatctatataattccattgcagtatataacaaaattattccctacccattaatcgatataatgcaaattctgatcttataacataaggattaaggcggtgacggaatagataaagatatgaaaggaatagacttgtatgataaggacggaaaatacattgttttggtgacagaataggaaataaatagcacatgttagggtaaagtcattaaatttacatcctaaccttttatatttatcaacaaacctatttaaactatgcaccttctctctctttttttaatggaggtagtagaactctaagacatgctcacatacgttatttttaaataattgataaaaatctgacctctatgcccaagtgggatatacacagccaattctacggacttaaggaattttattttagtatggctgttctgcaagctatgtgcctgaacattacaacccctgaaagtaatgtcaaaataatctcacagtgcttacatcatataattatatcatcttgttcagcttgaaatttgaggcatactggcaatcttttgacattacggagatatgcaaaggttgtacaattagctcttcctaatgacaacttaaccaaggatgctaatgacttcttgtgtaaaatccttctgtcactacagcgcaactatgatgtatcacttccacataacaagattccagacctcctatctgctcttgcaaaaaagatggccattccagccatgccatctggagaggaattcaagccagaggccgccatagtgaactattatggcccaagtatgtaatttgctccttcaacagtgactgtccttttagattgatataaatgataggaaataatctcaaagtttcatgttcctatccctgtctataggtgacatgcttggtggccacgttgatgacatggaagcagattggagtaaacctattgtaagcataaggtaataattatgcttcactaactttttcatgttatgatgtcactcgatcttaacaaagtggcttcctttttataaatttagtttggggtgcaagtgcatttttcttcttggaggcaaaacgagagatgaagttccaacagcaatgtttctgcgaagtggtgatatcgtattgatggctggggaggcacgggaatgcttccatggtaatgcattttactgaactaaagttgtttttagtggtaatgctaattcaaacaccatatttatcatgttcctatttttatctttcccgtcctcttatcgcaggtgttccacgaatcttcacaggaagtgatcaggcagaaatctctgcgctggttccgcagctatctgctgaagatgactcttttatcttaaactacattcaaaattcaaggataaatatcaacatcagacaagtctactgatcagtcaattcttttgttacagttaagagaatgtgttgtaaaatgctgcctttctgctgcctccccagatcaactcacatagtgcgatagtctgattgattgcctctggagttggagtagaccggttgtggaaagataggaaagttttggatccattttacagtttaatcccttatgtccaaactaaccatgaaaaagattctttgaccatcaaaagggtctcttagg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0488500, RefSeq:Os11g0488500