BGIOSGA003717

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Revision as of 10:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003717| Description = BGIOSGA003717| Definition = Oryza sativa Indica Group BGIOSGA003717, complete gene.| tag = | tid = BGIOSGA003717-TA|...")
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Gene Name

BGIOSGA003717

Description

BGIOSGA003717

Definition

Oryza sativa Indica Group BGIOSGA003717, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA003717-TA

Ensembl Protein ID

BGIOSGA003717-PA

Length

4613

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22535548..22540160

Sequence Coding Region

22535548..22535854,22538902..22538983,22539079..22539211,22539314..22539385,22539496..22539618
,22539696..22539809,22540113..22540160

Genome Context

<gbrowseImage1> name=IndicaChromosome01:22535548..22540160 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:22535548..22540160 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGCAGCGGCTAGTGAGAGACAGCGAGGGCGGCGACCAGCGGGAGCTCGGTGGCGGCTGTTGCGAGCAGCGAGGGTGGCGACCAGCGGGAGCTCGGTGGCGGCCGGTGCGAGCGGCGGCGGCGGCGCAGATGCGCGCTCGGCCGCGGCGGCGGATGCGAGCTCGTCGGCGGCGGCGGCGGGAGGCGCGCTCGGCCGCGGCGCCGGATGCGAGCTGGTCGGCGGCGGGAGGCGAGCTCCACGGCGGCACCGAATGCGAGCTTGGCGGCGGCGGGAGCTGCGAGCTCGGCGGAGGCGCCGGATGGAGGGTTACTGAGCCGCACATCTGTCAGAAAGAACAATGTAAAGCTACAAACTCTATGACTCTTGTGCATAACCGATGCAGGTTTGCAGATAAGCAGATCATAAAGTTGCAGGAAACACCAGATGAGATACCAGAAGGTGGCACTCCACATACTGTTAGTGTCTTGATGCACGATAAGCTTGTAGATGCTGGAAAGCCTGGAGACAGGGTTGAGATAACTGGGATATACAGAGCCATGAGTATTAGAGTTGGCCCAACTCAGAGGACAGTGAAGTCGATTTTCAAGACGTACATTGATTGCCTTCACATAAAGAAGACAGACAAGTCTAGACTTCATGTTGAGGACTCCATGGAAACTGATAACCCCAATGCTAACAAGACAACTGAAGATGATTTTCTCAGAGATAAGGTTGAGAAATTAAAAGAGTTGTCAAAGTTGCCAGATATATATGACAGATTAACTAGGTCATTGGCTCCANACATATGGGAGCTGGACGACGTTAAAAGGGGCCTCCTTTGCCAGTACAAAATCTGGGCCCACCTAACGCCGTTAAAACCAAGGGCAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MARQRLVRDSEGGDQRELGGGCCEQRGWRPAGARWRPVRAAAAAQMRARPRRRMRARRRRRREARSAAAPDASWSAAGGELHGGTECELGGGGSCELGGGAGWRVTEPHICQKEQCKATNSMTLVHNRCRFADKQIIKLQETPDEIPEGGTPHTVSVLMHDKLVDAGKPGDRVEITGIYRAMSIRVGPTQRTVKSIFKTYIDCLHIKKTDKSRLHVEDSMETDNPNANKTTEDDFLRDKVEKLKELSKLPDIYDRLTRSLAPXIWELDDVKRGLLCQYKIWAHLTPLKPRAN</aaseq>

Gene Sequence

<dnaseqindica>1..307#3355..3436#3532..3664#3767..3838#3949..4071#4149..4262#4566..4613#ATGGCGAGGCAGCGGCTAGTGAGAGACAGCGAGGGCGGCGACCAGCGGGAGCTCGGTGGCGGCTGTTGCGAGCAGCGAGGGTGGCGACCAGCGGGAGCTCGGTGGCGGCCGGTGCGAGCGGCGGCGGCGGCGCAGATGCGCGCTCGGCCGCGGCGGCGGATGCGAGCTCGTCGGCGGCGGCGGCGGGAGGCGCGCTCGGCCGCGGCGCCGGATGCGAGCTGGTCGGCGGCGGGAGGCGAGCTCCACGGCGGCACCGAATGCGAGCTTGGCGGCGGCGGGAGCTGCGAGCTCGGCGGAGGCGCCGGATGTGAGTGCCGAAGACCTTTTTTTTCCTATTTCTTTGTTTTTTTTCTCTATGTTGATTTGTATATATATATATATATTATTATATATATATATATATATATTATATGAATTTGTGATTTGTTTGTGAATTTGATGGGTATACTCACCCTCTCTACGGTGAGAGGTGACCACATCTACTCATCCACCTACTCCCTCCAACCAGATAAAAAATTGGATCACGAAATTCACCTTTATCCCTACAACCAAACAAAAAACTGGATCGCCATATTCACTCAACCAAATAAAAAACTGGATCGCCATATCCAACAAAATATGGACCGCCATATCCCATCTAACCTTGACCGTGAACCAAATACACCTTAATAGAGTATTAGTTTTTTTAAAAAAATTACATAGTGAATTAATAAAATTTAAGCAAGTTTTTGGAGATATGCCTAGGGCTCCGTCCCTGCCGCCACCCACCTGCTAGTCGCTGCCCGTCGCCTACAGAGGGTTTGGGATGGGAACGATCCGCAGTTGATTGGGCTAGTTGGGTGGGTAAGTATTTTGTCAGGGGTACCTTTGACTTGTTACATTCTATAAATTATTATTTTTCCTTTCTTCTTTCATTTCTTTGTAGCACAAAATCATGGGCCCACCTAACGCCGTCCAAATCAAAGGCAAACTGAAGTTTGACGACAAAATCACAAAACCTAAAAAAGAGAAACAAAATCACAAGTAAAACTCAAGTAAGGAGAACATAATTATGCCAAAACCAAAAAAAAAAGGAAAAAAACCACATCTCATTTATTTCTATCTATATATACGGATTCTCAAGACTGAACCTGTTTTTTACCACTTGGTGCAACAGTAAGCCTTGGCTCAGCCCATTATTAGGCGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCAGCGAGATAAAAAACATCCTCGAACCATAAAACCAGACACACGAGATCCTTTAACTATACAAAACCGGTCACCTGAGGTCCCTCGGCGGTTTTTATCCCGGTTTAGTCCTACGTGGCGCACCAAGGTCGTCGGTGGCTGAGTCAGCGCGGACCCACGTGGGCCCCATATGTCAGGCTCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTTCGCCGCGTCGTCGACTGGATCTCCTCTCCCGCCTCGCGACAGTTGGCCTCATCTGGCTCTCCATCGAAGAGGATGCGGTGAGGAGGGAGTCGGCAGAGGGGAGGACGGGAGGATGCGGCGGCACTCGATCTCTCCGCGGCGGAGAGCGTGGACGGGAGGATGCGGCCGGCGGAGGCGGCGTGAGAGTGAAGCGGAGGCGCGGCGGTGGCGGCAGGCTACGCCCCACGTGGCCGCAGCGCACCTTGGTGCCGAGCCGCTGCAGCTCGAGGTGCCCGGCTCCGTGCTGGAGCACGGCGCGGATGTTGCTCACCGTGAACATGATCTCGGTGACCTCCCGCCGGAGCAGCTTCCCGGTGCTCCCTGTCGTCTCCGCGAGCATCTTATCACTTGCAGCGACCGCTTCACGGCCTTAGCGCACGACAGCATGATCATGACTGATCCGGCGCCGATGGCGGAGAAATCGATGATCTTGTCGAGGAGGCGTCTATTGAGTATATATATTTCAGATTCAAGACAGATAGCCGCTTGAAACCTTCGAACGTTTGAGGCAACGCAACCATACATCTTTTCATAACAAGTGCTTCTATTCCAGTTAGGCTGACAAAAGCTTTGCATCATATAGTTTTTACTCCTGTCTGCAACTTTTGTGTTTGTCGAGTGTAACATACACATTGGACAGGTTAGGTGCATGCAAATTCAGAACAGTTAGCTGCTTAAAACCTTCAAACTCTCGAGGCAAGCTCATGATGCATCTTTCTATCTGTAAATATTCCAAATCACTGATAGAGAAGAGGCACGATGGAATCTTATTATAATTCCCACGGGAGAACTCAATTGTGATGGAACTTGGTTTTTTCTTGACAGCATGTGCATCCACCTATCAAATACACTGCGTTGCCAATCTTGCTGCAGGTGTCGTGGTTGCGCGTCAGCTTCTTGATGATGAGGAGGCCTAGGAGGTTGCACTCCTCGTCGGTGACTTAGAGCAGCAACGACACCGACTCGATGGCGCCAGGGACGCCGGCGACGCGGAGCGCGTTCTGCTTCTTGCTGGCTAGCTTGGACACGACGAGCGAGGCGGACGCCCTGGAGGTGGCCTCGGCGGCGCCGTTCCAGGTGAGCATCTCCACCAGCCAGTCCACCACTACCGCCGACGTGCCGACCCGCCGTAGCGCGGCCTCGCCGAGCCACGGGTTCGCCGTGACGTTGACGAAGATGACGAAGGGAGAGAAAAGGGGAAAGGGGGAGAGGAGGCTAACGTGGACATCTGACATGTGGGGCCCACGTGGGTCCCACGCTGACTCAGCCACCAGGTAGATCAAAACCGGGGTCAAAACCACCGAAAGATCTCGGGTGACCGGTTTTGTATAGTTAAGGGACCTCACATATCTGGTTTTGCGGTTCGAGGACGTTTTTTTATCCTGGTGATAAGTTGAGGGACCTTCAGTGTACTTTTTCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACAACATTTAGGAATTTTATTTATCATACCACATTGCTGAGGAACTGATAAATAGTGATACTAATGGAGTACGCAAATCAAACATCCATACTGCTATTGTCCAATCCAAGACTCCGACTTAGTCTGTCTGTCATAAAGTAACACTTTGCACTGTGGTAGTAATTGTAAGTAAAAACATGCTTATGTTCTTAACTTACATTATATTCTGGTGGTTAATGTTTGAAGAGATTGGTCATGCAGATCCTATGAAAACACATTAGTGGCCTAGTGGGAGTAATGACTAAAACTCCATCAGTTTCTGTTGTTTTATCATGTAACTAATTCACTCTATTTCTTAGGGAGGGTTACTGAGCCGCACATCTGTCAGAAAGAACAATGTAAAGCTACAAACTCTATGACTCTTGTGCATAACCGATGCAGGTAGCTATATCCTACTTGTAACCCCTTTTTCTTTATAGGATTTTTGACAGATATGTAGTCCTGACCTTTGGATGGAACATTTTATTTGTAACTAGGTTTGCAGATAAGCAGATCATAAAGTTGCAGGAAACACCAGATGAGATACCAGAAGGTGGCACTCCACATACTGTTAGTGTCTTGATGCACGATAAGCTTGTAGATGCTGGAAAGCCTGGAGACAGGGTTGAGGTTAGCAGTGAATCTTTGTTTGGTCATTAATACAAGAAAATAATTTTGTTTGTGGTTCTTATTCACATCGTAAAAATCTTGATTTTTTTCTTTGATTTATAGATAACTGGGATATACAGAGCCATGAGTATTAGAGTTGGCCCAACTCAGAGGACAGTGAAGTCGATTTTCAAGGTAGAGGATGTGCAATGTTATCCTACTTGCTATCTTAAATTCCTTTTCTGCACAGGAAAAAAGTTTTAAATTATCTACTCAAGCATCGTCTAACAGTTTTCTTTAATCAGACGTACATTGATTGCCTTCACATAAAGAAGACAGACAAGTCTAGACTTCATGTTGAGGACTCCATGGAAACTGATAACCCCAATGCTAACAAGACAACTGAAGATGATTTTCTCAGAGATAAGGTATCCCTCAATCACCTTACCTCTCTGGGATAGCACTAAGTGTAAATGTGTTTAACACTGTCCTTTCTGTATTGCAGGTTGAGAAATTAAAAGAGTTGTCAAAGTTGCCAGATATATATGACAGATTAACTAGGTCATTGGCTCCANACATATGGGAGCTGGACGACGTTAAAAGGGGCCTCCTTTGCCAGGTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGAAGATGAGTTTTATGAATTACTTTGGCCTTTAATTGTACTATTCATATGTGTCAGACAGAAGCAAGGCAAACTAAGTTTGGTGGCATTTTTTGCAATTTGTGTATTTATATTGGCTATTCCGAATTAGATGATGAAAGTAGTGGCATATGGACAATTCTCCCTAAGTATTTTTTGTCAGGGGCACCTTGGTCTGGTTACATTCTATAAATTATTATTTTTCCTTCTTCTTTCATTTATTCATAGTACAAAATCTGGGCCCACCTAACGCCGTTAAAACCAAGGGCAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003717

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003717&oldid=41441"