BGIOSGA003718

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Revision as of 10:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003718| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003718, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA003718

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003718, complete gene.

LocusTag

OSJNBA0051H17.26

Ensembl Transcript ID

BGIOSGA003718-TA

Ensembl Protein ID

BGIOSGA003718-PA

Length

4300

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22541092..22545391

Sequence Coding Region

22541092..22541569,22541653..22541781,22542399..22542480,22542576..22542708,22542811..22542882
,22542993..22543115,22543193..22543306,22543380..22543592,22543686..22543784
,22543870..22544030,22544132..22544228,22544371..22544532,22544611..22544691
,22544785..22544863,22545063..22545091,22545179..22545229,22545317..22545391

Genome Context

<gbrowseImage1> name=IndicaChromosome01:22541092..22545391 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:22541092..22545391 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCACCGACGATGTCCCGCTCTCCTCGGAGGCCGGGGACGAGGACACCCCCGAGACCGACGGCGGCGGCGGCGGCGGCGCGGGCGCCGACGCCACGCCGGTGTTCGTCTGGGGCACCAACATCAGCGTGCAGGACGTCAACGCCGCCATCCTCCGGTTCCTCCGCCACTTCCGCGACCCGCGCGACGCCGGCCGCGTCGACCCGGTCATGGACGAGGGCAAGTACATGCGCGCCATCCACCGCATCCTCGAGCTCGAGGGCGGGGAGTCGCTCGACGTCAACGCCCACGACGTGTTCGACCACGACCCGGACCTCTACGGCAAGATGGTCAGGTACCCGCTCGAGGTGCTCGCCATCTTTGATATCGTGCTCATGGACCTCGTCGCGCGCATCGAGCCCCTCTTCGAGAAGCACATCCAGACCAGGATCTACAACCTCAAGTCCTCGGTTTGCTTGAGGAATCTCAACCCTTCTGATATCGAGAAGATGGTGTCCATCAAGGGTATGATAATTCGGTGCAGCTCGGTGATTCCAGAGCTCAAGGAGGCTGTGTTCCGCTGCTTGGTTTGCGGGTTCTACTCTGAGCCTGTAATGGTTGATCGAGGGAGGGTTACTGAGCCTCACATCTGTCAGAAAGAACAATGTAAAGCTACAAACTCTATGACTCTTGTGCATAACCGATGCAGGTTTGCAGATAAGCAGATCATAAAGTTGCAGGAAACACCAGATGAGATACCAGAAGGTGGCACTCCACATACTGTTAGTGTCTTGATGCACGATAAGCTCGTAGATGCTGGAAAGCCTGGAGACAGGGTTGAGATAACTGGGATATACAGAGCCATGAGTATTAGAGTTGGCCCAACTCAGAGGACAGTGAAGTCGATTTTCAAGACGTACATTGATTGCCTTCACATAAAGAAGACAGACAAGTCTAGACTTCATGTTGAGGACTCCATGGAAACTGATAACCCCAATGCTAACAAGACAACTGAAGATGATTTTCTCAGAGATAAGGTTGAGAAATTAAAAGAGTTGTCAAAGTTGCCAGATATATATGACAGATTAACTAGGTCATTGGCTCCAAACATATGGGAGCTGGACGACGTTAAAAGGGGCCTCCTTTGCCAGCTTTTTGGTGGAAATGCTTTGAGGCTTCCTTCTGGAGCTAGTTTCCGAGGCGACATCAATATTTTGCTTGTTGGTGATCCTGGAACAAGTAAATCCCAGCTTCTCCAATACATGCACAAACTGTCTCCTCGTGGCATTTATACAAGTGGCAGAGGAAGTTCAGCTGTTGGCCTTACTGCATACGTTACCAAGGATCCTGAAACTGGTGAAACTGTTCTTGAGAGTGGAGCGCTTGTTTTGAGTGACAAAGGTGTTTGTTGTATTGATGAATTTGATAAGATGTCTGATAATGCTCGAAGCATGTTACATGAGGTGATGGAACAACAGACTGTCTCCATTGCCAAGGCTGGAATAATTGCATCTTTAAATGCCAGAACATCAGTTCTAGCATGTGCAAATCCTACTGAATCACGTTATAATCCAAGGCTCTCTGTGATTGACAATATCCATCTTCCTCCAACACTGCTTTCTAGGTTTGACCTCATTTATCTGATATTGGACAAGGCAGATGAGCAAACTGATAGACGCCTGGCTAAGCATATTGTTTCGTTGCATTTTGAGAATCCAAACATAGAGGAGCTCGAGGTCTTGGATTTGCCAACACTTGTAGCCTACATAAGTTATGCAAGGAAGCATATACAACCACAGTTATCTGATGAAGCTGCAGAAGAATTGACCCGTGGCTATGTTGAGATGAGGAAAAGAGGAAACAGCCCTGGTAGCAGAAAGAAGGTCATAACTGCGACAGCTCGACAAATTGAGAGCTTGATTCGGCTCAGTGAAGCACTGGCCCGAATGCGATTCTCTGAAGTGGTTGAAGTACGAGATGTTGTAGAGGCCTTCAGGCTTCTCGAAGTTGCCATGCAGCAATCGGCAACTGATCATGCCACTGCTTGGAGGCCCTCAGTGCGAATGATTGAGTTGCTGGAAGAAATTAGGAAGCAGAGCTCTATGGAAGTTCATCTGCATGATCTTCGCGGTGCTCTTGGCACTCTGATGACAGAGGGTGCCGTAGTCATCCATGGAGACAGCGTCAAGAGGGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MSTDDVPLSSEAGDEDTPETDGGGGGGAGADATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELEGGESLDVNAHDVFDHDPDLYGKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSSVCLRNLNPSDIEKMVSIKGMIIRCSSVIPELKEAVFRCLVCGFYSEPVMVDRGRVTEPHICQKEQCKATNSMTLVHNRCRFADKQIIKLQETPDEIPEGGTPHTVSVLMHDKLVDAGKPGDRVEITGIYRAMSIRVGPTQRTVKSIFKTYIDCLHIKKTDKSRLHVEDSMETDNPNANKTTEDDFLRDKVEKLKELSKLPDIYDRLTRSLAPNIWELDDVKRGLLCQLFGGNALRLPSGASFRGDINILLVGDPGTSKSQLLQYMHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDKGVCCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPTESRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPNIEELEVLDLPTLVAYISYARKHIQPQLSDEAAEELTRGYVEMRKRGNSPGSRKKVITATARQIESLIRLSEALARMRFSEVVEVRDVVEAFRLLEVAMQQSATDHATAWRPSVRMIELLEEIRKQSSMEVHLHDLRGALGTLMTEGAVVIHGDSVKRV</aaseq>

Gene Sequence

<dnaseqindica>1..478#562..690#1308..1389#1485..1617#1720..1791#1902..2024#2102..2215#2289..2501#2595..2693#2779..2939#3041..3137#3280..3441#3520..3600#3694..3772#3972..4000#4088..4138#4226..4300#ATGTCCACCGACGATGTCCCGCTCTCCTCGGAGGCCGGGGACGAGGACACCCCCGAGACCGACGGCGGCGGCGGCGGCGGCGCGGGCGCCGACGCCACGCCGGTGTTCGTCTGGGGCACCAACATCAGCGTGCAGGACGTCAACGCCGCCATCCTCCGGTTCCTCCGCCACTTCCGCGACCCGCGCGACGCCGGCCGCGTCGACCCGGTCATGGACGAGGGCAAGTACATGCGCGCCATCCACCGCATCCTCGAGCTCGAGGGCGGGGAGTCGCTCGACGTCAACGCCCACGACGTGTTCGACCACGACCCGGACCTCTACGGCAAGATGGTCAGGTACCCGCTCGAGGTGCTCGCCATCTTTGATATCGTGCTCATGGACCTCGTCGCGCGCATCGAGCCCCTCTTCGAGAAGCACATCCAGACCAGGATCTACAACCTCAAGTCCTCGGTTTGCTTGAGGAATCTCAACCCTTCTGGTGATTGCGCACTGCTCTGCTCCTTTAGCTACTTGTGGTCGGCAATTCTTTTATATGATTTCTGATTTTGCGTTTCGTTGCAGATATCGAGAAGATGGTGTCCATCAAGGGTATGATAATTCGGTGCAGCTCGGTGATTCCAGAGCTCAAGGAGGCTGTGTTCCGCTGCTTGGTTTGCGGGTTCTACTCTGAGCCTGTAATGGTTGATCGAGGTATATATATATCAGAACTAATGTGGATACCTTTTTCACACTGCGTATTCCATATGCTCTTGTTTTAAGTGAACTTCAGGTGATCAATTAATCAGATTGCGAGCCTTAATTTTGCTCATAGAGAGTTACATATTGACAACTCATTGTTAACTTCATTTGTACAAATCATTCTTATCATGAAAGATGATAAATTCAAGCTTCATTTGACATGTTATATGTCATTACTATTATCATTTATGCATTTTCTTTTATTTTGTTTGCAAAAACTTTTCATTTTGTTGGGATACACAACATTTAGGAATTTTATTTATCATACCACATTGATGAGGAACTGATAAATAGTGATACTAATTGAGTACGCAAATCAAACATCCATACTGCTATTGTCCAATCCAAGACTCCGACTTAGTCTGTCTGTCATAAAGTAACACTTTGCACTGTGGTAGTAATTGTAAGTAAAAACATGCTTATGTTCTTAACTTACATTATATTCTGGTGGTTAATGTTTGAAGAGATTGGTCATGCAGATCCTGTGAAAACACATTAGTGGGAGTAATGACTAAAACTCCATCAGTTTCTGTTGTTTTATCATGTAACTAATTCACTCTATTTCTTAGGGAGGGTTACTGAGCCTCACATCTGTCAGAAAGAACAATGTAAAGCTACAAACTCTATGACTCTTGTGCATAACCGATGCAGGTAGCTATATCCTACTTGTAACCCCTTTTTCTTTATAGGATTTTTGACAGATATGTAGTCCTGACCTTTGGATGGAACATTTTATTTGTAACTAGGTTTGCAGATAAGCAGATCATAAAGTTGCAGGAAACACCAGATGAGATACCAGAAGGTGGCACTCCACATACTGTTAGTGTCTTGATGCACGATAAGCTCGTAGATGCTGGAAAGCCTGGAGACAGGGTTGAGGTTAGCAGTGAATCTTTGTTTGGTCATTAATACAAGAAAATAATTTGGTTTGTGGTTCTTATTCACATCGTAAAAATCTTGATTTTCTTCTTTGATTTATAGATAACTGGGATATACAGAGCCATGAGTATTAGAGTTGGCCCAACTCAGAGGACAGTGAAGTCGATTTTCAAGGTAGAGGATGTGCAATGTTATCCTACTTGCTATCTTAAATTCCTTTTCTGCACAGGAAAAAAGTTTTAAATTATCTACTCAAGCATCGTCTGACAGTTTTCTTTAATCAGACGTACATTGATTGCCTTCACATAAAGAAGACAGACAAGTCTAGACTTCATGTTGAGGACTCCATGGAAACTGATAACCCCAATGCTAACAAGACAACTGAAGATGATTTTCTCAGAGATAAGGTATCCCTCAATCACCTTACCTCTCTGGGATAGCACTAAGTGTAAATGTGTTTAACACTGTCCTTTCTGTATTGCAGGTTGAGAAATTAAAAGAGTTGTCAAAGTTGCCAGATATATATGACAGATTAACTAGGTCATTGGCTCCAAACATATGGGAGCTGGACGACGTTAAAAGGGGCCTCCTTTGCCAGGTAAGATCATCTATCTGTTTGAATGTTTTTGCACTAATAGCCTAGTATAACAAGCTCTTACTGTTGTGTCCAGCTTTTTGGTGGAAATGCTTTGAGGCTTCCTTCTGGAGCTAGTTTCCGAGGCGACATCAATATTTTGCTTGTTGGTGATCCTGGAACAAGTAAATCCCAGCTTCTCCAATACATGCACAAACTGTCTCCTCGTGGCATTTATACAAGTGGCAGAGGAAGTTCAGCTGTTGGCCTTACTGCATACGTTACCAAGGATCCTGAAACTGGTGAAACTGTAAGTCTACATGAATCCTTTATTTTCGCAACTTAATTTAACTCGTTTTAATGTAATCTGATTGATGACTTCAACCATGACATCTCATTTCAGGTTCTTGAGAGTGGAGCGCTTGTTTTGAGTGACAAAGGTGTTTGTTGTATTGATGAATTTGATAAGATGTCTGATAATGCTCGAAGCATGTTACATGAGGTCTCTTGTAATGCTGCGCCCCAGAATTTGTATCACACAGTACTATTTAGTCAATGCTAAACTGTCCTTTTTCAAAATATTGCAGGTGATGGAACAACAGACTGTCTCCATTGCCAAGGCTGGAATAATTGCATCTTTAAATGCCAGAACATCAGTTCTAGCATGTGCAAATCCTACTGAATCACGTTATAATCCAAGGCTCTCTGTGATTGACAATATCCATCTTCCTCCAACACTGCTTTCTAGGTGAGTGCAATGCAATGTGAATGAGCAATTCTTTCAGGACAAACAGATATATAATAGAAGTGTTTTAACTCTTGATTGTTTTTATTTTTTTTCAAATTCAGGTTTGACCTCATTTATCTGATATTGGACAAGGCAGATGAGCAAACTGATAGACGCCTGGCTAAGCATATTGTTTCGTTGCATTTTGAGAATCCAAACGTAAACATAACAACTCCTTTTCTTCCTGAAGTTTGTACATTTTTACTTATTTGATATAAACTGCTAACCGTCTTGCAAATCAGAACACTGTTGTTAGCTTTAGCCTATTTCTTATTAATTGTGCATTCTTTCTGCTATCTAGATAGAGGAGCTCGAGGTCTTGGATTTGCCAACACTTGTAGCCTACATAAGTTATGCAAGGAAGCATATACAACCACAGTTATCTGATGAAGCTGCAGAAGAATTGACCCGTGGCTATGTTGAGATGAGGAAAAGAGGAAACAGCCCTGGTAGCAGAAAGAAGGTAGTGTAGGCTTTTTAATATGATATTTTTAGCCATTAAATGGTACAAGTGACTGATGCTTTTTTGCTTATTGTATAGGTCATAACTGCGACAGCTCGACAAATTGAGAGCTTGATTCGGCTCAGTGAAGCACTGGCCCGAATGCGATTCTCTGAAGTGGTAATGATCATTGCTGATTCCTAGTTGTCTTGGCTTCACAGCATAATTCTGGTTACTTTGGTACTCATGATTTCATTCTTCACTTGTCTACAGGTTGAAGTACGAGATGTTGTAGAGGCCTTCAGGCTTCTCGAAGTTGCCATGCAGCAATCGGCAACTGATCATGCCACTGGTCAGACAAATCTGCTTAGCGCCATTTCCTATGCATTTTTTTCTTGTAACCATAACATAAAGTGTTGACATTTTTATCAATCAACCACTAAAGGTACAATCGATATGGATCTTATCATGACTGGAATATCTGCGAGCGAAAGGCAGAGGCGGGACAATCTCGTTGCAGCAACCCGCAACCTTGTGATGGAGAAATGCAGCTTGGAGGCCCTCAGTGCGAATGATTGAGGTAAAGAACCTTCAATTAGTGTCCTTTGTTCTCATCATTGTTTGCCAAACCAGTGGACTAAGTTATTCTTCCTGATTGATTTCGCAGTTGCTGGAAGAAATTAGGAAGCAGAGCTCTATGGAAGTTCATCTGCATGATGTAAGTTGGAGATCTAGTCTGCATTGCTTGCATTGACCTGATACCCTGGGAGGCTCTAACCCATTCCTGAATTTTCCATCTTCACAGCTTCGCGGTGCTCTTGGCACTCTGATGACAGAGGGTGCCGTAGTCATCCATGGAGACAGCGTCAAGAGGGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003718

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003718&oldid=41442"