Os11g0488900

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0488900| Description = Zinc finger, MYND-type domain containing protein| Version = NM_001189618.1 GI:297728366 GeneID:9272396| Length = 120...")
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Gene Name

Os11g0488900

Description

Zinc finger, MYND-type domain containing protein

Version

NM_001189618.1 GI:297728366 GeneID:9272396

Length

1205 bp

Definition

Oryza sativa Japonica Group Os11g0488900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19056565..19057769

Sequence Coding Region

19056565..19057020,19057107..19057769

Expression

GEO Profiles:Os11g0488900

Genome Context

<gbrowseImage1> name=NC_008404:19056565..19057769 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19056565..19057769 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcggcgcggcgagccctcgctcgccgccagcggcgaagaagcgggcggtggtggtggctggcgacggcgacgactccgacgtgttcgaccggctccccgacgacatcgtcctcgtcgtgctctccaggctcgccgccaacgccgcgtcccccgccgacgtcgcctcggcggcactcacgtatgtggctgctgctgctgctgctctgttttttcttttattccccctcggtgtcgtgttcgtccgtcgaggcgaagagatttctcatgggtgcgcgcgcgggcgcaggtgcaggaggttccgggagctcgcgacgcacccggcggtgctgtcgcgcgcgtcggcggcggccgtcgcggtgcggtggggcgcgtggtcggaggcggctcaccggttcttgcggcggtgcgcggccgccggcagcctccacgcctgctacttcctcggcatggtgaggttctactgcctggggagcagggcgacgggggcggcgctgctggggcgcgcggcgggcggcgggcacgcgccggcgctgtacgcgctggcggtggtgcagttcaacggcagcggcgggggcaaggcggacaaggacgcgcgcgcgggcgtcgcgctgtgcgcgcgcgccgcgtggctaggccacaccccggcgctccgcgagctcggccactgcctccaggacggctacggcgcccgccgcgacgcccccgccggccgccgcctcctcctccacgccgccgcccgcgagcacctctcctggaagaagcacaaccacggacaccacgacggcagcgccgccgaggacgcggtgagccggttcatggtcgcgtggtgggactcgcaccgcgccaaggcggcggcgcgggggtgcctccctggcgaacacggcgacggcgagcacgacggcggcgaggacctgcggctgtgctcgcacgcgcggtgcgggcggcgggagacgcggcggcacgagttccggcggtgctcggtgtgcggcgccgccagctactgctcgcgcgcgtgccaggcgctcgactggaagcgcgcccaccgcgcccagtgcgccgccgcgcgctggctcgccgcggccgccgccgccgccgacggcgtcgcgcactga</cdnaseq>

Protein Sequence

<aaseq>MASGAASPRSPPAAKKRAVVVAGDGDDSDVFDRLPDDIVLVVLS RLAANAASPADVASAALTYVAAAAAALFFLLFPLGVVFVRRGEEISHGCARGRRCRRF RELATHPAVLSRASAAAVAVRWGAWSEAAHRFLRRCAAAGSLHACYFLGMVRFYCLGS RATGAALLGRAAGGGHAPALYALAVVQFNGSGGGKADKDARAGVALCARAAWLGHTPA LRELGHCLQDGYGARRDAPAGRRLLLHAAAREHLSWKKHNHGHHDGSAAEDAVSRFMV AWWDSHRAKAAARGCLPGEHGDGEHDGGEDLRLCSHARCGRRETRRHEFRRCSVCGAA SYCSRACQALDWKRAHRAQCAAARWLAAAAAAADGVAH</aaseq>

Gene Sequence

<dnaseqindica>1..456#543..1205#atggcgagcggcgcggcgagccctcgctcgccgccagcggcgaagaagcgggcggtggtggtggctggcgacggcgacgactccgacgtgttcgaccggctccccgacgacatcgtcctcgtcgtgctctccaggctcgccgccaacgccgcgtcccccgccgacgtcgcctcggcggcactcacgtatgtggctgctgctgctgctgctctgttttttcttttattccccctcggtgtcgtgttcgtccgtcgaggcgaagagatttctcatgggtgcgcgcgcgggcgcaggtgcaggaggttccgggagctcgcgacgcacccggcggtgctgtcgcgcgcgtcggcggcggccgtcgcggtgcggtggggcgcgtggtcggaggcggctcaccggttcttgcggcggtgcgcggccgccggcagcctccacgcctgctacttcctcggcatggtgagagtcacccaagctccccttgctctgcttctttgctctgtttttttgttcgatctcgtcggctgatggcggcggcggtgcaggtgaggttctactgcctggggagcagggcgacgggggcggcgctgctggggcgcgcggcgggcggcgggcacgcgccggcgctgtacgcgctggcggtggtgcagttcaacggcagcggcgggggcaaggcggacaaggacgcgcgcgcgggcgtcgcgctgtgcgcgcgcgccgcgtggctaggccacaccccggcgctccgcgagctcggccactgcctccaggacggctacggcgcccgccgcgacgcccccgccggccgccgcctcctcctccacgccgccgcccgcgagcacctctcctggaagaagcacaaccacggacaccacgacggcagcgccgccgaggacgcggtgagccggttcatggtcgcgtggtgggactcgcaccgcgccaaggcggcggcgcgggggtgcctccctggcgaacacggcgacggcgagcacgacggcggcgaggacctgcggctgtgctcgcacgcgcggtgcgggcggcgggagacgcggcggcacgagttccggcggtgctcggtgtgcggcgccgccagctactgctcgcgcgcgtgccaggcgctcgactggaagcgcgcccaccgcgcccagtgcgccgccgcgcgctggctcgccgcggccgccgccgccgccgacggcgtcgcgcactga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0488900, RefSeq:Os11g0488900