BGIOSGA003745

From RiceWiki
Revision as of 10:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003745| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003745, complete gene.| tag = OsI_023...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003745

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003745, complete gene.

LocusTag

OsI_02389

Ensembl Transcript ID

BGIOSGA003745-TA

Ensembl Protein ID

BGIOSGA003745-PA

Length

2222

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23078276..23080497

Sequence Coding Region

23078276..23078392,23078749..23078831,23078924..23079074,23079179..23079278,23079402..23079494
,23079712..23079763,23079847..23079944,23080125..23080231,23080324..23080497

Genome Context

<gbrowseImage1> name=IndicaChromosome01:23078276..23080497 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:23078276..23080497 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGAGGCAGTGGCGTCTTTTCGGAGAGGAGGCGTTGGCATTGCCGGGATGAGCAGCAGCACTCTGGAGGAGGTGCAGATGCAGGAGACGCTCATCTTCTCTGATACCATCAAGGATCTCAAGATGCTGAAGTCGCAGCTGTACTCTGCAGCAGAGTATTTCGAACTAGCCTACACGCAGGAAGATGACAAACAGGAGGTGATGAACAGCCTGAAGGAGTATTCCGTGAAGGCTCTCGTCAACACTGTCGATCACCTGGGATCCATATCCTTCAAGGTTTCAAGCCTCATCGATCAAAGGTTCGATGAGGTTGACGACACAAATCTCCGGATGTCCTGCATCCATCAGAGAGCCCAAGTGAGCCAAGCATGCATGGACAAGGAAGGCCTTTCACAGCAATCATTGGTGATCACAGCTCCCAAGTATCACAAGAGGTACATCTTACCAGCAGGAGATGGTTCAATGCCTAATGCTGTGCCCAACTTCAGCGAGATGAGGAAGGCCAAGAACAGAGCTGCACAGATGCAACAAGTCTTCAGCGCAGCAGCAGCAGCATCCCAAGCAAAAGCCAAAGAGAAGCAACCTTCATTCAGCAAGCTTCGGTCGATCGCCCGTGCACCTTCGCAACGTGCACGCTCGTCGTCACCAGCACAGCGCCCACATTCTGATAATACAATACCCACCAAACGAGCAGATAAGAGGTCAGAATCGCCAATTCCGAGGACCACGCCACTAACAAGGTCCGGATCACTTCCACAAAAGCCATCCTTGTTGAAAACTTCAAGTGTCAGAGTTCAGATGCAGACATCAGAGCACAAGAAATTGGCATCGGTGAGGTCACAAGCTGACAGAAACGATGACAAGGAAGGCGAGCAGACTCCGAAGAAGGGCAAGAAGTTTCTCAAGTCGCTGCTCAGCAGGCGCAAGTCCAGAAAAGAGGAGCCTTTGCCCTGTTACTTTGATGATTACTGA</cdnaseq>

Protein Sequence

<aaseq>MVEAVASFRRGGVGIAGMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNSLKEYSVKALVNTVDHLGSISFKVSSLIDQRFDEVDDTNLRMSCIHQRAQVSQACMDKEGLSQQSLVITAPKYHKRYILPAGDGSMPNAVPNFSEMRKAKNRAAQMQQVFSAAAAASQAKAKEKQPSFSKLRSIARAPSQRARSSSPAQRPHSDNTIPTKRADKRSESPIPRTTPLTRSGSLPQKPSLLKTSSVRVQMQTSEHKKLASVRSQADRNDDKEGEQTPKKGKKFLKSLLSRRKSRKEEPLPCYFDDY</aaseq>

Gene Sequence

<dnaseqindica>1..117#474..556#649..799#904..1003#1127..1219#1437..1488#1572..1669#1850..1956#2049..2222#ATGGTGGAGGCAGTGGCGTCTTTTCGGAGAGGAGGCGTTGGCATTGCCGGGATGAGCAGCAGCACTCTGGAGGAGGTGCAGATGCAGGAGACGCTCATCTTCTCTGATACCATCAAGGTCAGTAGTCCCAAAGTTCAGAGTTCAGGCATATTCTGTTCTTCCCTTTTTGGTTTCCCTTCCTCTTCTTTGCCTGCAAAATCATTTGTCATTGCTCAAGCTTAATCACAGTCAAACTCAATGAAAATATGATGAAATATTGTCAAATTGGATTTGGTGTTGGGCTCATCAAGAGAAAAGAGAACAAATATTGTGGCTGTTTTTTTGCAGTTAGGCAGTATATTGTTTTGTTTCTTTTTCGTTTTCTTTTTCTTTTTTCTCGTTGACATTAGACAACTAAAGAAAAATACTGCATAGTTTGATGAGATCCGAGTGTTCACCGGTAATCAGCAACACGTTGCAACCTTCGTTTTCAGGATCTCAAGATGCTGAAGTCGCAGCTGTACTCTGCAGCAGAGTATTTCGAACTAGCCTACACGCAGGAAGATGACAAACAGGAGTACGTGATGTACCGATTCTTTCTTTCTTCCGTTTTTTTTCTGCTGCTAGATTAATTATCTCAAAAATGTGTACGAACGATATTATTTGTAGGGTGATGAACAGCCTGAAGGAGTATTCCGTGAAGGCTCTCGTCAACACTGTCGATCACCTGGGATCCATATCCTTCAAGGTTTCAAGCCTCATCGATCAAAGGTTCGATGAGGTTGACGACACAAATCTCCGGATGTCCTGCATCCATCAGGTACTAATTTTCAGAGTTCATCACGAATAGTACCTGAATTCAGTACTACGATCTAGTATAGTTCTTGAATTAACAAAGTGATGATCAATAATAATAACCTGAAGAGAGCCCAAGTGAGCCAAGCATGCATGGACAAGGAAGGCCTTTCACAGCAATCATTGGTGATCACAGCTCCCAAGTATCACAAGAGGTACATCTTACCAGGTAATTAAATATGTATACCTCTCCTTTTGTTTTGGTCCAACTTGTCAGCAAATTCTGATGGCAGGGAGTAAACAAGAATTAATTTGTGTGAGACATTTCAATCCCGTTATCCATTAATCGCAGCAGGAGATGGTTCAATGCCTAATGCTGTGCCCAACTTCAGCGAGATGAGGAAGGCCAAGAACAGAGCTGCACAGATGCAACAAGTCTTCAGCGGTAAGGGAGCTTAAATTGTACTCCCTCCATTCCAAAATATAATATAAGAAATTTTAGACGAATAGGACATTTTCTATTACTATTAATCTGGACAGAGAAAATCTCTTATATTTTTGAACGGATGGAGAAATCATGAGAATTATTGCAACTCTTCAATCAATGATGAGCATGTACTAGTTGTCTCGATCTCCTTTTGACCTGCACTGTTTTGCCGCAGCAGCAGCAGCAGCATCCCAAGCAAAAGCCAAAGAGAAGCAACCTTCATTCAGGTCAGTCTGCTATGCACAACAGCTTGGACGTTTGTCCATCTCCAGCTTGGAAGTTGGTGATCTGAAAAATTGACAATTTGCAGCAAGCTTCGGTCGATCGCCCGTGCACCTTCGCAACGTGCACGCTCGTCGTCACCAGCACAGCGCCCACATTCTGATAATACAATACCCACCAAACGAGGTAAAGCAATCAGCAACTCACCGACAGAAAAAAAGTGTTCCCTTGAAACACAGGAATTTTTATGGCATTTTCATAGGATTTAGCCCGATTCTAGCAAAATTTCCTCTGTTTCAAAGGAAATGGTGCTTATATCTTTGATCAGATTTGCTCATGTTCAATTGCACATGTTCGTTTCTGCAGCAGATAAGAGGTCAGAATCGCCAATTCCGAGGACCACGCCACTAACAAGGTCCGGATCACTTCCACAAAAGCCATCCTTGTTGAAAACTTCAAGTGTCAGAGTTCAGGTAAACCACACGGCCTTGTGAAATACAGTCTACCAAAGAACTGGAATATCCTGTCAATAAACCTGAAATATGTTCATCTGTCACTGATGAAGATGCAGACATCAGAGCACAAGAAATTGGCATCGGTGAGGTCACAAGCTGACAGAAACGATGACAAGGAAGGCGAGCAGACTCCGAAGAAGGGCAAGAAGTTTCTCAAGTCGCTGCTCAGCAGGCGCAAGTCCAGAAAAGAGGAGCCTTTGCCCTGTTACTTTGATGATTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003745