Os11g0490800

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0490800| Description = Similar to Spermidine/putrescine import ATP-binding protein potA (EC 3.6.3.31)| Version = NM_001189619.1 GI:297728368...")
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Gene Name

Os11g0490800

Description

Similar to Spermidine/putrescine import ATP-binding protein potA (EC 3.6.3.31)

Version

NM_001189619.1 GI:297728368 GeneID:9270400

Length

3266 bp

Definition

Oryza sativa Japonica Group Os11g0490800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19156072..19159337

Sequence Coding Region

19156259..19156408,19156848..19156927,19157004..19157055,19157140..19157337

Expression

GEO Profiles:Os11g0490800

Genome Context

<gbrowseImage1> name=NC_008404:19156072..19159337 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19156072..19159337 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggtggtggggacggccgccgcgttctcgccggcggtgacgccgtctccggcgaggaggcgggccgtggattcagggaggaggttttctcgaagctgtcggtcggggagagtttcagtctcagcagttgggtactcccaattggaggtcagaagagttagctatcgacctccaggaaccgaacaaaacttgttgaatgaaattagcctcaatcttaaggagaaaagttttggattactttttggacgaagcgggagcggaaaaactactcttttgcagcttttggcaggtctatcggaacctacccatgggacaatttgcatacagaagtacaacgatagtggaaatcctatgggtccaccagaattattaactgctcaaagagttggtatcgtgtttcagtttcctgagaggtttgagttgccactttcaccattaagtaatataaactcaataagtttgtatatggtcagttga</cdnaseq>

Protein Sequence

<aaseq>MQVVGTAAAFSPAVTPSPARRRAVDSGRRFSRSCRSGRVSVSAV GYSQLEVRRVSYRPPGTEQNLLNEISLNLKEKSFGLLFGRSGSGKTTLLQLLAGLSEP THGTICIQKYNDSGNPMGPPELLTAQRVGIVFQFPERFELPLSPLSNINSISLYMVS</aaseq>

Gene Sequence

<dnaseqindica>188..337#777..856#933..984#1069..1266#atactccagagtccagccgacccgacccaaacctcaccgccgccgtcgccgttgccgccgccgccgccgcgtgcgcccctgcggaaatctagggtcctcggcggcgtccccctcgctccgcccccgcgttctctgcggcggcctgagcgacgcgccgaccggccgaaggctccgcgttgagctggccatgcaggtggtggggacggccgccgcgttctcgccggcggtgacgccgtctccggcgaggaggcgggccgtggattcagggaggaggttttctcgaagctgtcggtcggggagagtttcagtctcagcagttgggtactcccaattggaggtgcaaagctctctctttttattccccccttatccattttacaattcggtgctaagaattatttatttttgttatgtaacaagtgtagaacagcttgaaatgagatgtggcaccggcaagttctatcttcgttgtttggtgtctagttgttgtttatattgtttgtatatatattttgcagtttgctgtttggtagtaggagtaaagcaaatgtgtttgttttaggaagaaagtaaatgatggatggattaaaaaaatgatgttcatgaggatcgttcattacaaatttacatgctggtgtgctatttgagctattgccgattcgccgttctacgagtcatgtagattatctatgatccatgtgctcttttctgctctgtgtatgcatttttaccattttttatcattgtgaaatgtattgaacatcaccttattttaggtcagaagagttagctatcgacctccaggaaccgaacaaaacttgttgaatgaaattagcctcaatcttaaggagaaaaggtaagcaggtataattgttgtagagtaattttatttctggggtgactctttttctgaatgttgcatgctcatgcagttttggattactttttggacgaagcgggagcggaaaaactactcttttgcaggtttgcataaaaaatactgcatgccttgttgaattccctcttatcctccatcttaaggtgacatcttgattcttgatttctcagcttttggcaggtctatcggaacctacccatgggacaatttgcatacagaagtacaacgatagtggaaatcctatgggtccaccagaattattaactgctcaaagagttggtatcgtgtttcagtttcctgagaggtttgagttgccactttcaccattaagtaatataaactcaataagtttgtatatggtcagttgaaatgtttaaactgttccagtaaacaataagatcgtttacatatctcatgtaggtacttcttagcagatactgtgcttgaggaaattacttttggatggccacggcaaaatacagactttctttttagggagaagcttgctttaaaacttcaaaatgccattaactcggtaatgactaatgattatccttcaaaagttctttaggatttcgatttgtacctaatagaacattttatcatactttccactgttaagtgagctcttgcttggaacacgaactatttacccttgacataatttgtgctatgcatgacatgctaggttggtctgaatggcatttcattggaagaagatccacaatctctaagtggtgggtttaaacggcgacttgctttggcaattcaactggtattgtttgttgtggtttattaatgacactcttttgtgtcttttttaaaaaagcaagatgtcatatatttctgcctcctttattaattttataattttataggtccaaactcctgatctattattgcttgatgagcctcttgctggtcttggtatgtgattgaatgcctatactgaagcattcagtattgctctatttcatagtctgtttccaaacatgcatttctttgcagcacaaggatgctaccaaaaagaaaaataattatattagaaacaatacgtgtagtttttattaaaataattataaatgatgatgtattttcaataatttaccatcaaaatattacataaattcaatggtcatgttttgatatctgaaatgacattatttagtattaaagcgaccatttgttaattcttttgtgaaatactatttgttaatggtgtgttgaggtcatccatctgttgtctaatgcacttctttgtgggcatcgtatcatctctgttgacagttgctgtgattattgttgatagccaagtattgctgcgaaagtattatataactgtggcatatatcaaaacttttccctcaatatcagattggaaagctcgtgctgacgttgtgaatcttctcaaggacctaaagaaggatcatactatactggctgtaagtcatgacctaaggtaatttaaaacttacataaatgaaatatgttgtttttgtccactttcttcagataagtaggtagtttatttgccctctactcaaaaagaaatattcttcctttgtgctccatcagaatcatatttgagcactttacaagttatttgttggcttgttgataatcttgactagtaagtttttgaatgccttgcaaacattctgtagggaattgtacccactagttgaccgctcatggagaatggaaatggggggagttttgaaggaagaagctttatctgtgtaaggatgcttctgtttgtactgtcaatcaagctggcactgtatactagctgtctccagatcaggttcggtcaactagacagctgtatctgtagtcttatgttatattggtctgtaatacttttttcacagttacaaatcaaggatggtcgtaactaaattatttggtcataagtatgacttgtgcagtttgagaatttcaggagcaagcaaatgcaagcagaacttcaatggagagataattgatttttctccaaattcccaccgctggaacgaagaaacaatgtctgatgcagatttttgcctgggtaagggtaagatgcctgtctgccaggtagctgaattccaactccagaactgcataagccattcctccgggacagggttctgcaaaaaaatgcagggttcgcataaaaacctgtataatttggaatgcagagcaaaacaacactgaacatcacactgacatttatgctgaagaggagctaactgattgtgctactgttaggaaacataaaaaaccttgttctactgcctgactattccattcgcgtatgtacaacccgttctcctccagatttctttgatctgttctatattgtactaaataatgcatgaatccttatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0490800, RefSeq:Os11g0490800