BGIOSGA003798

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Revision as of 10:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003798| Description = BGIOSGA003798| Definition = Oryza sativa Indica Group BGIOSGA003798, complete gene.| tag = | tid = BGIOSGA003798-TA|...")
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Gene Name

BGIOSGA003798

Description

BGIOSGA003798

Definition

Oryza sativa Indica Group BGIOSGA003798, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA003798-TA

Ensembl Protein ID

BGIOSGA003798-PA

Length

5094

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24234907..24240000

Sequence Coding Region

24234907..24235020,24235779..24235808,24235908..24235993,24236086..24236296,24236509..24236638
,24237581..24237624,24238059..24238181,24238436..24238565,24239307..24239491
,24239581..24239712,24239896..24240000

Genome Context

<gbrowseImage1> name=IndicaChromosome01:24234907..24240000 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:24234907..24240000 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTAGTCCTATCACTCTTCTTCCTCCCCGCGCAAATCCTCGCCGCCACTTGGATGCCAGGGAGCTCCACCTCGCCGCCGACCACCACCACCACCCTTCTCTCCTCCGCTCCCCGCTGGAGAGGGTCAAGATCTTACTGCAGACCAGAACTCATGGGTTTCAATCCCTTGGTATCCTCCAATCATTGAGGAAGCTGTGGCAGTATGAGGGAATTCGAGGCTTCTACAAGGGGAATGGCGCCAGTGTGCTTCGGATTGTTCCATATGCGGCATTGCATTACATGACTTATGAGCAGTATCGGTGCTGGATATTGAATAATTTTGCTCCATCAGTGGGTACAGGGCCTGTGNTTGATCTATTGGCTGGCTCAGCCGCAGTTGGGACTGCAGTTCTATGTACCTACCCATTAGACCTTGCTAGGACAAAGCTGGCATATCAGGTTTCAAATGTGGGCCAACCTGGCAATGCTTTGGGAAATGGTGGTAGACAGCCAGCATATGGTGGTATCAAGGACGTTTTCAAAACTGTTTACAAGGAAGGAGGCGCACGAGCTTTATACCGTGGAGTAGTTGTTGCTTTCCTTGATGATCAGAAGGAGCTGGCGATTTCGGAGGTGAATGCCTGCGCGCTGGACTTGCTCCCGGTATACGCCAAGGAGCTTATCGCCGGGGGTGCAGCCGGTGCATTCGCAAAGACTGCGGTAGCGCCGCTGGAGAGGGTCAAGATCTTACTGGAGGTTTCAAATGTGGGCCAACCTGGCAATGCTTTGGGAAATGGTGGTAGACAGCCAGCATATGGTGGTATCAAGGACGTTTTCAAAACTGTTTACAAGGAAGGAGGCGCACGAGCTTTATACCGTGGAGTAGGCCCAACTCTGATCGGTATCCTACCATATGCTGGACTAAAATTCTATATATATGAAGACCTGAAATCGCGAGTTCCAGAGGATTACAAGAGATCTGTTGTATTGAAACTCTCTTGTGGTGCTTTAGCTGGTCTTTTTGGGCAAACCCTCACTTATCCACTGGATGTTGTCCGAAGACAGATGCAGGTTCAGAATAAGCAGCCCCATAATGCGAACGATGCCTTCCGTATAAGAGGGACATTTCAGGGTCTAGCACTCATTATTAGGTGCCAGGGGTGGAGGCAACTCTTCGCTGGCCTAAGCCTTAACTATGTGAAGGTCGTCCCTTCGGTTGCTATTGGTTTCACAACATATGACATGATGAAGAATTTGCTGAGAGTGCCACCCCGAGAGAGACTTTATCAATCGTCTGGTAACGCATGA</cdnaseq>

Protein Sequence

<aaseq>MSSPITLLPPRANPRRHLDARELHLAADHHHHPSLLRSPLERVKILLQTRTHGFQSLGILQSLRKLWQYEGIRGFYKGNGASVLRIVPYAALHYMTYEQYRCWILNNFAPSVGTGPVXDLLAGSAAVGTAVLCTYPLDLARTKLAYQVSNVGQPGNALGNGGRQPAYGGIKDVFKTVYKEGGARALYRGVVVAFLDDQKELAISEVNACALDLLPVYAKELIAGGAAGAFAKTAVAPLERVKILLEVSNVGQPGNALGNGGRQPAYGGIKDVFKTVYKEGGARALYRGVGPTLIGILPYAGLKFYIYEDLKSRVPEDYKRSVVLKLSCGALAGLFGQTLTYPLDVVRRQMQVQNKQPHNANDAFRIRGTFQGLALIIRCQGWRQLFAGLSLNYVKVVPSVAIGFTTYDMMKNLLRVPPRERLYQSSGNA</aaseq>

Gene Sequence

<dnaseqindica>1..114#873..902#1002..1087#1180..1390#1603..1732#2675..2718#3153..3275#3530..3659#4401..4585#4675..4806#4990..5094#ATGAGTAGTCCTATCACTCTTCTTCCTCCCCGCGCAAATCCTCGCCGCCACTTGGATGCCAGGGAGCTCCACCTCGCCGCCGACCACCACCACCACCCTTCTCTCCTCCGCTCCCCGCCGCGGCGCCTAGGCCGCTGCCGCCGCCGATGGGCTAGGAGAGGAGAGGGATCGCCGCCTCCCTGCGATCGCCACCGGGGGAGCCGGACCCTCTCCGCGAGATCTGGTTAATTGATTTGCCTACTACCAGTATTCCGCTAGATTCTGGACCGATTCCTCTCTGTTGATGCAACCACTGTACAGCTTGTTGCTTTCCTTGATGATCAGAAGGAGCTGGCGATTTCGGAGCTGTATGCGTTGTTTCATATGGGTTTGCAGCTTATGCTACAACAGCTATCTCCGATTTAGTTTATTACCTTTGGGGAGCGTAGAGATTGGATTCCGCTTTGCGTTTTCCTCTTTCCTGCGAGATTCTAGCTTATCCTTCGATTAAACCTATTCGCGCGGCTATTAGCGCAAGTGGTTAGGACGGACGCAGACTAAAAAAGGTTAGGTTATTAGGGATTTGGTTTTCCATTTGGATTGCCGATTGCGGGAGCATATCCTATTGGGAGATTCCGGCACTGTAAAGATATCCTTGGCAGCTGAGTTGATTTAATGTTAATGTTAGTGGTGGTGGGGAGGGCAGATAATACGCATTCTGATCTGCCTGTCAAGTTGGGGGAGAAGAGATGGGTTCCTCACAGGAATCCACTTTTTCCTCCGCCTCAACGGCCGCGCAGGTGAATGCCTGCGCGCTGGACTTGCTCCCGGTATACGCCAAGGAGCTTATCGCCGGGGGTGCAGCCGGTGCATTCGCAAAGACTGCGGTAGCGCCGCTGGAGAGGGTCAAGATCTTACTGCAGGTTTGAACTGCTCAGAGTTCCATTTCATTATTATGTGGTAGCTGAATGACATCTTGGCTTATGCCAATTTCTGAGTGTACGTATGCTGTTGCTTTCTAGACCAGAACTCATGGGTTTCAATCCCTTGGTATCCTCCAATCATTGAGGAAGCTGTGGCAGTATGAGGGAATTCGAGGCTTCTACAAGTAAGTTACATGGAGAAAATACCTTACCTCAGGCTCTGGCTGCTCAATTTAGCATCTTAATTTTTATTTCGTGTTACTTACTGTTCATGAAGGGGGAATGGCGCCAGTGTGCTTCGGATTGTTCCATATGCGGCATTGCATTACATGACTTATGAGCAGTATCGGTGCTGGATATTGAATAATTTTGCTCCATCAGTGGGTACAGGGCCTGTGNTTGATCTATTGGCTGGCTCAGCCGCAGTTGGGACTGCAGTTCTATGTACCTACCCATTAGACCTTGCTAGGACAAAGCTGGCATATCAGGTATTGCATGCCCATCCTAATGCTTTGTTGATTGTCATCTTTAGTAGTCAAGAATCTCTCTCAGTAGAACTATCACTGAAATTATTCGACAATCAGCATTAGTAGTTCGCTAGTATTTTCCAGCAAATATTAGTAGTTTCTGTGATGCCATCCTTGCTAAGGAGCCATTGGCCATGGATTGTATGTAATAATTTTCTTCATAATTGCTCTAGGTTTCAAATGTGGGCCAACCTGGCAATGCTTTGGGAAATGGTGGTAGACAGCCAGCATATGGTGGTATCAAGGACGTTTTCAAAACTGTTTACAAGGAAGGAGGCGCACGAGCTTTATACCGTGGAGTAGGTACGTCCTGTCTGACAACTCCCTTTGCTATGGTTGAAGTTAGCATCTTTAGGTTTGTTAGTGTGAGCGTAACATAATATCATATTTCTTCTGATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTAATACACAGTAGAACCTATACTTCAATAAAAAGATTATCTTTAGTACCCTCTACTTTAATTCACACATTTGAGATCCTCTCTCATTTTACATCGCTGTCGCTGCTGCCTGTGATTCCTGCGAGGAAAGGGTGGGGGACAGGGGGAGTGACTAGCGTGGTTGCTACAGCGCTACACGTTCGCGTTTTGCACGCGGAACCGCCCCCACCTTTCTCCCTTTCCCCTTCCTCCATCAGCAGCAGCAGCACGGGCCTGACCGTGACCGTCCCCCACGTCGTCCTCCCCACACACGCGACGCCAGTACGCCACTGCCAGCGCGAAACAAGCAACACACGCATTCCTCCTCCCGATTCGCTCGCGGCCGCACCGCACCGCAGCTCTCCTCCTCCTCCTCCCCCACCCAAACCCACGGCGGCAGATTCGATCTCGAATTCTCGAACTCTCTCGATCGAACCCTGTGCCCTCTGCTCCCCGCAAAATCCTCCGCATTTGATGAGTAGTCCTATCACTCTTCTTCCTCCCCGCGCAAATCCTCGCCGCCACTTGGATGCCAGGGAGCTCCACCTCGCCGCCGACCACCACCACCACCCTTCTCTCCTCCGCTCCCCGCCGCGGCGCCTAGGCCGCTGCCGCCGCCGATGGGCTAGGAGAGGAGAGGGATCGCCGCCTCCCTGCGATCGCCACCGGGGGAGCCGGACCCTCTCCGCGAGATCTGGTTAATTGATTTGCCTACTACCAGTATTCCGCTAGATTCTGGACCGATTCCTCTCTGTTGATGCAACCACTGTACAGTTGTTGCTTTCCTTGATGATCAGAAGGAGCTGGCGATTTCGGAGGTGAATGCGTTGTTTCATATGGGTTTGCAGCTTATGCTACAACAGCTATCTCCGATTTAGTTTATTACCTTTGGGGAGCGTAGAGATTGGATTCCGCTTTGCGTTTTCCTCTTTCCTGCGAGATTCTAGCTTATCCTTCGATTAAACCTATTCGCGCGGCTATTAGCGCAAGTGGTTAGGACGGACGCAGACTAAAAAAGGTTAGGTTATTAGGGATTTGGTTTTCCATTTGGATTGCCGATTGCGGGAGCATATCCTATTGGGAGATTCCGGCACTGTAAAGATATCCTTGGCAGCTGAGTTGATTTAATGTTAATGTTAGTGGTGGTGGGGAGGGCAGATAATACGCATTCTGATCTGCCTGTCAAGTTGGGGGAGAAGAGATGGGTTCCTCACAGGAATCCACTTTTTCCTCCGCCTCAACGGGCGCGCAGGTGAATGCCTGCGCGCTGGACTTGCTCCCGGTATACGCCAAGGAGCTTATCGCCGGGGGTGCAGCCGGTGCATTCGCAAAGACTGCGGTAGCGCCGCTGGAGAGGGTCAAGATCTTACTGGAGGTTTGAACTGCTCAGAGTTCCATTTCATTATTATGTGGTAGCTGAATGACATCTTGGCTTATGCCAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTATTCGACAATCAGCATTAGTAGTTCGCTAGTATTTTCCAGCAAATATTAGTAGTTTCTGTGATGCCATCCTTGCTAAGGAGCCATTGGCCATGGATTGTATGTAATAATTTTCTTCATAATTGCTCTAGGTTTCAAATGTGGGCCAACCTGGCAATGCTTTGGGAAATGGTGGTAGACAGCCAGCATATGGTGGTATCAAGGACGTTTTCAAAACTGTTTACAAGGAAGGAGGCGCACGAGCTTTATACCGTGGAGTAGGTACGTCCTGTCTGACAACTCCCTTTGCTATGGTTGAAGTTAGCATCTTTAGGTTTGTTAGTGTGAGCGTAACATAAAATCATATTTCTTCTGATCTGCTGCATTGTTGCATAGTCTGCATAATCTAGTGCTGCGCATGTTGTGCAGCTTTCTTTAGACTGCATCAAGGAAGAAATCAAAATGAACAACTGATTGTACATGAACCTATGTTTTCTTTTTGGTCATTTTGGGCACTTATGCCCTTCAAAAAACAATGTGTACTACAAAAAGACGAAACACATTTTGCACAATTTTTTTTGCTGGCACACTTGTTCCAACATGTTGCACATCTAAGGATTTTCTAAGTAAGCAGGCAGACAAACCAAAATAGGTTCATATCCACATAGGACCTAAAATCCACCTTCTGTTTCAAGTTTTCTGTTCAGCAAGCTCAGATTAATGACCCATAAGCATGCAGAATTGCAGTGTATTCTAAAACAAAGGCACCATCGTTTAGTCACCTTCTAGTTCCAATGAATCAAGACTCTATTTTGGTGATCTAAAAGACAGTTGCCAGGATGCCATATATGACTGTAGCTTACAATAAATTAACACCATTTGTATGCTGAAACCTTTGTATATGAAATTCCTCGTTATTGTGGTTACTGTACTAGAAGTGAAAATTTGTATTGAGATATTATCTTAGAATTTATTTAGTCCGTGTACAGTTGTGTTAAAATTTTTTCTTCTAATCAATCTCAGGCCCAACTCTGATCGGTATCCTACCATATGCTGGACTAAAATTCTATATATATGAAGACCTGAAATCGCGAGTTCCAGAGGATTACAAGAGATCTGTTGTATTGAAACTCTCTTGTGGTGCTTTAGCTGGTCTTTTTGGGCAAACCCTCACTTATCCACTGGATGTTGTCCGAAGACAGATGCAGGTACAAATTAAACTCTCAGTCAAAGATAATCTGTGCGTTATAATTTAGATTGCAATGCCTGATTAATTCTTCACCTGTCCTGCGTTCAGGTTCAGAATAAGCAGCCCCATAATGCGAACGATGCCTTCCGTATAAGAGGGACATTTCAGGGTCTAGCACTCATTATTAGGTGCCAGGGGTGGAGGCAACTCTTCGCTGGCCTAAGCCTTAACTATGTGAAGGTAATAATCCCAACTGAGTTTCCTAGAGAGAGAAGGCGAAATAAAAAAGGAAGTGTACTAGGTCGCTTTTATTCTGTTTCAGTTATGTGCATCTATTGAAGAATAGGGACAACAGAAATGCTCATTTCAAACTGATCTTAAATATGCAGTGATATCCAAAATATGAACTTATCATGTTTTCAGGTCGTCCCTTCGGTTGCTATTGGTTTCACAACATATGACATGATGAAGAATTTGCTGAGAGTGCCACCCCGAGAGAGACTTTATCAATCGTCTGGTAACGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003798

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003798&oldid=41522"