BGIOSGA003821

From RiceWiki
Revision as of 10:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003821| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003821, complete gene.| tag = P0022F1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003821

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003821, complete gene.

LocusTag

P0022F12.30

Ensembl Transcript ID

BGIOSGA003821-TA

Ensembl Protein ID

BGIOSGA003821-PA

Length

5516

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24698916..24704431

Sequence Coding Region

24698916..24698947,24699024..24699120,24699237..24699251,24699379..24699435,24702014..24702610
,24702746..24703138,24704360..24704431

Genome Context

<gbrowseImage1> name=IndicaChromosome01:24698916..24704431 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:24698916..24704431 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGTAGCTTCTGCCCGGACGGTTGGCAGTCTGTGCCAGGTAAAAGCTTTGCAAGCAATGGATGTGCCTGGCTGTGCAACGCTCAGTCTGCCGATAGCAAAGCCTTCCCGCGCAAGCTCTTAGCCAAGAACGCTTCTATTCAGACAATTGTCTGCGTTCCATTCATGACTGGCGTTCTTGAGCTTGGGACCACTGATCCGGTTTCGGAGGAACCAAACGTGGTAAACCGAATCACCACGGCTTTCTGGGAGCTTCAGCTTCCGGCATGCTCAGACGAGCCAATTAGCTCCGGTACCCCTTCTTCCCCATCATCGCCGCCGACGAAAGAAACTGGAGACGCCAACACCGTGGTCATCGACGACCTCTTCCTCGCCCACAGCGATGCGATACTACCAGCAGGAGGAGATCAAAAAGAAGAACATCAGCTAGGCGACGACCTCGGGCAACAACAAGCAGCCACCGCCATGGAGATCGACGACGATGTGATCTACAGCCTGATCAGGAACTGGGATAACGACAGCAGCAGCAGCTGGATCGAGCTCCTGGACCACGCCATTGTCTCTCCCGCCTCGTGCTTTGTGCCTTGGAAGAGAACGGAGCTGGACAAGGAGGCGGTGGCCGGCGGGGAGGCGGCGCAGAGGTTGCTGAAGAAAGTCGTGGGCGGCGGCGGCGCATGGATGAATCGTGCCGCTGGTAGCTGCAGCATCAAGAACCATGTCATGTCCGAGAGAAGGCGCCGGGAGAAGCTGAATGAGATGTTCCTCATTCTCAAATCACTGGTCCCGTCCATCGACAAGGTGGACAAAGCATCCATCCTTTCAGAGACGATAGCCTACCTCAAGGAGCTGGAGAGGAGGGTGCAAGAGCTCGAGTCCGGGAAGAAGGTGTCTAGGCCGGCCAAGAGGAAGCCACGCTCAGAGACGATCATCGGTGGTGGCGGCGGCGGCGGCGGTGCTGGAGCTGTTAAAGAGCACCACCACTGGGTGCTCTCCGAGTCCCAGGAGGGCACCCCAAGCGACGTGCGTGTGATCGTCATGGACAAGGATGAGCTGCACCTCGAGGTGCAGTGTCGGTGGAAGGAGCTGATGATGACAAGGGTGTTCGACGCCATCAAGAGCCTCCGTCTTGATGTTCTCTCGGTGCAGGCGTCGGCACCGGATGGTCTTCTCGGACTGAAGATACGAGCTAAGTATGCCAGTTCTGCCGCCGTGGTGCCTGCGATGATCAGTGAAACTCTCCGGACAGCCGTAGCAGGCTACTAA</cdnaseq>

Protein Sequence

<aaseq>MCSFCPDGWQSVPGKSFASNGCAWLCNAQSADSKAFPRKLLAKNASIQTIVCVPFMTGVLELGTTDPVSEEPNVVNRITTAFWELQLPACSDEPISSGTPSSPSSPPTKETGDANTVVIDDLFLAHSDAILPAGGDQKEEHQLGDDLGQQQAATAMEIDDDVIYSLIRNWDNDSSSSWIELLDHAIVSPASCFVPWKRTELDKEAVAGGEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVSRPAKRKPRSETIIGGGGGGGGAGAVKEHHHWVLSESQEGTPSDVRVIVMDKDELHLEVQCRWKELMMTRVFDAIKSLRLDVLSVQASAPDGLLGLKIRAKYASSAAVVPAMISETLRTAVAGY</aaseq>

Gene Sequence

<dnaseqindica>1..32#109..205#322..336#464..520#3099..3695#3831..4223#5445..5516#ATGTGTAGCTTCTGCCCGGACGGTTGGCAGTCGTAAGTCCAACCTATCCTGAAGTGTTGTTTTTATTGATCTGCTTGTGGTGTGCGTGGTGTATGCATGCACTGTCAGTGTGCCAGGTAAAAGCTTTGCAAGCAATGGATGTGCCTGGCTGTGCAACGCTCAGTCTGCCGATAGCAAAGCCTTCCCGCGCAAGCTCTTAGCCAAGGTACGTACATTAATTAATTAATAAATTAACCGGCTCATTAATTCATGGCATATAGTTGATCGACCTAACTTATGCATACTCTCTCTTTTGACCAATAATTTGTTATATATATGCAGAACGCTTCTATTCAGGTATGTACATATTCTACATGCATGCTTCGTCAGGTCAAATTGATGTTCGTACGTCACATATATACTGTATATTATTTCTGATCTGCATCAGCTAATGAAATGAAATCTCGATTGGTTATACGCACAGACAATTGTCTGCGTTCCATTCATGACTGGCGTTCTTGAGCTTGGGACCACTGATCCGGTAAGCGCAACGTTAAATTACAGAGACATACATACATATATGATAATATAGCACTATATATATATGTATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTTATCTAGGGTGAACAAGGTATTATATCAATAACAATAATAATAAGGTCATAACAAAGGTAAATAGGCATGGCTAAATAAAACAGTGATAACGCGGGAATTTAAATAAAGCGATAATGCATTAATTTAAATCAAAATAATTTTATAAACTGGGATTCAATATGCTCAAGGATGATGTGACTTGCCTTGCTCAGAGAGAACGGCCTTCCGAACCTTCGGCGACGACCACGAACCACGCTTCGGGAACCTCCGGAACGACAGAAGCTACGCGAAGCACACAAGCAAAGCTACAAGCCTATAAAGAAGCAATAACAATACATAAAAAGAAAACACAGGGTTCTTTAGGTTATAACAAACATTAAGAGACTTGAACGGGTCGATTCGGAGTTCGTATGACCAAGATGTGATCATCCGAGGTTTAATGCTGTTATATATGGAGATTTGCGGATTATTATAATTAAGCTTTGCGACTATAAAACATGTGTGAGCGCTAGCCTGGAAAAGACAGGAAGGCTGCGCCGTTGACATGCGGACCCCACATGTCAACCTAAAGGACCACGGTAGACCGGGTACACAGAGACGGTCCACGGGTCGACGGAAGCGGACCCCGTGTATCAACCGAGGCGAGTGGCCGACAAACGGACTCCACTAGACACCACACGGGTTGCACACGTGGAAACCACGCGGCTACCAAGCGGGCACGCTAACACGGACACTACACGGTCACCACCTGCACACGTGAACGACTACCGACACCGGTACACGGGTACCGGGGTCGACGACCGCACAACGGGTACGGGGCGACACCGAAAGGTACGAGGACGGGGCAGCGAGAGGAGGAACCTTACCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGACGACGGGAGGCGGCGGGATTCGCGGCGACGTCGGCGCTAGGCGCGGGCAAGGCGGCGGGAGCGTCGGGAGGAAGGGGATGACGGGTGGGCCCCACCCGTCAGCGAGGGTGGCAGGCGGGCCCGCCCGTCAACGGCGCGCGCGCGGGGAGGAGGCCGGATGGGCCACGGGGGAGAGAGGAGAGAGGGGGGAGATGGGCCGAGCCGGCCCATTAGAGGGAAGGAGGGGTTTTAGGGTTTTTTCTTTTTAAAAAATCTTTTTAACTTTGTTTATTTCTTAATAATTATTATTTGTGCTCTGAAAATTCCACTAAAATTCATTTACACATTTTAGACTTTTAGGAAATATACATAAATCCTCCAAGCCTTAATTGACTTTTAACTTTGCACATTTTAATTTTTGGAGGCTTTCACAGGGATTTTAATTATTCTAGGCATAATTTAAAGGATATATTTTAGGGTCGTTTTGGGACGCGACAGTTCTGCATGTGTGTTTTTATTAAAAAAAGGATCTAATTAACCTTCTGAAATAAAATAATGTATCTACCGATTTAAATGAAAATCGATGATCAGATTAGAGTACCACTTAGTGACCTAGAAGCATTTGTAAGATGTCACTTGGCGACTTAGAAGTATTTATAGGATGTTTAACGATTTTTAGTATAAAATAATCATTTTTCTAAAATTTCTAAGATTTTCTTTAATTTAAGAATGTCATATAGCAGCTTAGAGGCGTTTGTAAAATATTTAATGGATTTTGACATGACACGGGTGTGGGAGGGAGGGAGAGGTTTGGGATTTTTTTATTAAAAAATCCAACAACCTAAATGTATCCATCAATTTATATAGAAATCGATGATCAGTTGCTATATATTTTTAAGATTTTCTATTACTTTATCTAATTTAATTGCACCACGTAGGGAGAGCTGCCGGGACTAGTAGTTGGTCTATTTATGATTTTTTTTACTTGTAAAAAATTTTGATTTTAATTTCTCATGAAATAGAAAATAACATAGGAAGGAAAAGAAGGAAGCACGTACAGGACGTACGTTTATTCGTTAGTATGATTGCTATATATTGTTTTTTTTTTACGTTGTTGGTTCCGGATGTGATTTTATTCTTTTACAAAATAGATCTAACCATCCAAAACAATGGATCCACTGACCTAAATAAAAATAGAAAGTTAGATTTGGGTGTCACTTGATGACTTGAGAGCGTTTATAAGGTGCCACTTGATAGTTTGATAGTATTTATATGAAGTTTAATGGATTTTTAGTATATAATTGATAAGCATACATATTTTTTATTGTTTAGGTAGTAATATTTGCCTCGTAGAAAACAAAAAACCAACATAAATACAAGTTATTGGATATAGTGATTTCTAGTCTTGAAAAAATTAAGTGATTGATCAATAAGAATAAGTGAGTCAATTGACAAATACTAGCTAGCAACCAGACAGGAAGAAATTAATTAAAGCTCTTAATCCTAGATTTAATTGTAATTATTATTCACAAGATGGTGTGGTAATATCCCATATTTCCAAAGGTTTCGGAGGAACCAAACGTGGTAAACCGAATCACCACGGCTTTCTGGGAGCTTCAGCTTCCGGCATGCTCAGACGAGCCAATTAGCTCCGGTACCCCTTCTTCCCCATCATCGCCGCCGACGAAAGAAACTGGAGACGCCAACACCGTGGTCATCGACGACCTCTTCCTCGCCCACAGCGATGCGATACTACCAGCAGGAGGAGATCAAAAAGAAGAACATCAGCTAGGCGACGACCTCGGGCAACAACAAGCAGCCACCGCCATGGAGATCGACGACGATGTGATCTACAGCCTGATCAGGAACTGGGATAACGACAGCAGCAGCAGCTGGATCGAGCTCCTGGACCACGCCATTGTCTCTCCCGCCTCGTGCTTTGTGCCTTGGAAGAGAACGGAGCTGGACAAGGAGGCGGTGGCCGGCGGGGAGGCGGCGCAGAGGTTGCTGAAGAAAGTCGTGGGCGGCGGCGGCGCATGGATGAATCGTGCCGCTGGTAGCTGCAGCATCAAGAACCATGTCATGTCCGAGAGAAGGCGCCGGGAGAAGCTGAATGAGATGTTCCTCATTCTCAAATCACTGGTCCCGTCCATCGACAAGGTAGCTACCTAGCTTACTGCTTAATAATTTATAAGTAGTAGACCAACTTGTCATTGATATTTCATGATGAAATTCAAGTTACTTTTATATACTCATTACTATGTACTGACATAACTGTTACTTATTTAATTTCAGGTGGACAAAGCATCCATCCTTTCAGAGACGATAGCCTACCTCAAGGAGCTGGAGAGGAGGGTGCAAGAGCTCGAGTCCGGGAAGAAGGTGTCTAGGCCGGCCAAGAGGAAGCCACGCTCAGAGACGATCATCGGTGGTGGCGGCGGCGGCGGCGGTGCTGGAGCTGTTAAAGAGCACCACCACTGGGTGCTCTCCGAGTCCCAGGAGGGCACCCCAAGCGACGTGCGTGTGATCGTCATGGACAAGGATGAGCTGCACCTCGAGGTGCAGTGTCGGTGGAAGGAGCTGATGATGACAAGGGTGTTCGACGCCATCAAGAGCCTCCGTCTTGATGTTCTCTCGGTGCAGGCGTCGGCACCGGATGGTCTTCTCGGACTGAAGATACGAGCTAAGGTTTGTCTCTCTCACTCAATAGAAACTCCGTATGTTATATTATTAATGCTCATGTTTCTTAAGTAGTATAGCTAGTATGCCATATCCATAAAATTTATAAAAAACTGAGCACACATGGAAGAGAGCGAGAAAAAAAAAGAAAAAGAGAAATGTTGACTCTAATGTAAGAGCTAGTTTTATACATGCTCCGAGGTATATAGATAGATCAAGCACATAAGTGAGAGGAGGAAAAAAATAATTATGGCAAATATATTGTATTCTCGCCATTCAAAAGTACAAGTAACGCAAATACAAAGAAAGAATTGAATTACCTTCTCCATTGGATCAACTTGATGCATGCACGTAATGTGATTGGGGGGCTTGATGGTAAAGGATTTAAAACAAATAAAATTTAGATGAGAAAGATGTACTAGCTATTGTATACATGCATGCACGCCTATGAAAAATTGGTTGTCTTATATTTTGGTACAGACAGAGTAGTTAGCTATACTATAAAAATATTTATGAAGTTGTGCATATTAATTAAGAAAATAGGTTATTTAAATGGGGATGGTTTAGATGAAGAGGTAGTTGAAGAAGCAACCTTAAATTTTTATAACACTAGAAGTTTAGCATATTTTGGGTTGGAGAGAGTAGAGGACATCATTTTAGGTTCTAAGTTTTTCAAAGTCGGTAAATATAACTATTCTTTTTTTCGCAAGAAAAATATAGAACCTTGATAGCTAGATTCTTCTGTACAAATTCAAAAGATAAAGGGCTTATTTTAGCGGTAAACCAAACATACTCTAACTATTATAATTTTACTAATTTTTAGTAATGTTAGAATCTTTTACTCTCAAAACAACACCAAAGTTTGGCAATTAAGAGTATAAGCCAAATATATATGTTTTTTTACCTGGTCTACCAAACTTTGCTAAGGACCAATTTTGACTTTGCTAGAATTTTGTAAGGTTAAAATAAACCAACCATACATATATATACCTACATTCATATACCCATAGTTTCACTAGCGCAATATCGTGGAAACTTTATTGTAACAAATTTGGCTACGCTGTTTTCTTATGCTTAGAACTTAGGTTTTAAATAATGATCACGACAAAATTTAATTAGTTTATGTTGATTTTATGGATTTAAAAAAGACAATCGTTAATGATGCTAGCTGTGTATAAAATGGAGCTTTCATTATTCATTGATGCTAGCTGTGTTGGTATTGTTTTGCAGTATGCCAGTTCTGCCGCCGTGGTGCCTGCGATGATCAGTGAAACTCTCCGGACAGCCGTAGCAGGCTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003821

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003821&oldid=41545"