Os11g0493700

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Revision as of 09:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0493700| Description = Similar to NBS-LRR type resistance protein (Fragment)| Version = NM_001189620.1 GI:297728370 GeneID:9270249| Length ...")
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Gene Name

Os11g0493700

Description

Similar to NBS-LRR type resistance protein (Fragment)

Version

NM_001189620.1 GI:297728370 GeneID:9270249

Length

5953 bp

Definition

Oryza sativa Japonica Group Os11g0493700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19214213..19220165

Sequence Coding Region

19214213..19214319,19214780..19216957,19217058..19217361,19219791..19220165

Expression

GEO Profiles:Os11g0493700

Genome Context

<gbrowseImage1> name=NC_008404:19214213..19220165 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19214213..19220165 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggactgtttgccactcttgccatcaggaaggcactggacaagctctcctccatcctgccagcaagaagcctattggcatcctcctcgtcggcagctgctatggtgaggcaagggcaggagcaagatctggaggacctccggatgctggagcggacgatgcacaggattcacgcgactctgaaggacgcggagcagcactgggacatccgtgatgaaagcgccaagctgcggctcaaggagctcaaggagctagcgtatgacgcggaggacgtggtggacgagtacgagtacgaggtgaaccgttgcaaggctgaggctctccagctatctgcaagcgtggccagccacaagcgtaagtggcaacaggaggaaaatgaggtcttgtaccataatactggtatggtacatgttccagaagagctggctcttaaagcaaggaaacttattaagagattccatgaaatccaatattattctgataattttactttatcggagaatgatggagagagacggtttgctcctaatattggtactctacccaagactagctctgttatatatgcaccgaaaattattggaagagagcaagacaaggacaacattgtagaaaagttgttgtccatgacgagtgacagtgtagctactccagtttctatcttggctattgtcgagcaatttgatcctacttacataacaaagagcatcataagttcattagagaaggataattgtggtctatcggaagtttgtagtcctcatgagacattggcaaaacgaataaagcacaagatggttttacttgtgctggatgatgtatggaatgaacgaagagattgctgggatctgttgtgcgaaccgatgaacacagcaaagttatgtatgattatagtaacaacccgtagtgagagagtggcaaagcttgtgcagacaatgcctaatttctacagcctaaactgcctaagttctgaagagagctggtcattgtttaagcaagttgcttttactgttgacaatggaaacactccaaaccttcaagagatcggaatgtctattgttaaaaagtgtaagggcttacctttagcaattaagacactagccagcatgttgtgctatgaaacatgtgaacagagatggaaagatgtcatagaaagcgagttgtgggacttggagcaaccaaggaatgaggttttgccatccttggagttgagctacaagaacatgcctatatacctaaaacgatgttttgttgccatctctctatatccaaaagactatatattcgatagaaaccaggtgcttcaattgtggaaagtactagacctccttcaaagtgacagacataataatgagactgaaattggaaatagatatctcgatgaattggttgagcggtcatttcttctatttcttctaacaaaggttgatggacattactacaagaaatacttaatgcatgatcttattcacgatcttgcatgctttctttctgcagatgagttctttagacttgatgatagcagtacatccattgaaattccacaaaatgctcggtacatatctatccaaaatttggcatccagtgagatttcaatcacaccacttgctttgagggccatcatagtgttgcctagagcagaagtgaacattaataattcagaagcattattttctaagtgtgaaaagttacgagccctcgtgttaggtgaaggctgtctggatcaaaacttacctgccttaatgggaaggttgaaattactacgccatttgaaacttgtcacaagcttctttagtcactctgatccatgctgggaccacgttgatggactacgtggaattgggcacctaaataacatgcttactttgcctccaattcatctgagaaatgatcgaataatagagctaaggagcttgaacaagctaagggagttgagaataggtgggttgggactgcacttgactatcgatggagcaaaggatgctaggctacagagcaaaaggcacctacaattactaagcttggattttggagattgctgtccagatcacaaccaacaagtgcagctacttgagagcctgcgaccacatcgcaacctcggagaattgataataatgaactacgagggtctgaagtatccctattggttgggcgatgcttccttttccaacttgtctcaaatagaactcggttattctcacattcagtaccttccaacgctcggtgatcttccgtccctcgtgtccctccatatccatgacatgatgattgtcgagcgaattggctgggagttttgcagccattttcatggtgttaagggattcccatcattgacacagttgagattcaattggatgcataagtggtcagaatggtctggaattgttgacggtggatttccacgcctgcgcactctttcgatctgccatgcccacagtctaaggcttgataacattgaatcatttccgttcagatccttgataactctcgaactggacaaatgctgctgcatcacaaccattcctgcatcgacttcactacgcacgctgcgcattgatcggcggagctttgacttgcgcagaagctcaactgatggtccgcggctgaatcgcctcccgtccttggagtgtttaacagtcatctgccatgacaccacaagcatccttcttcagccacagcacctgccttcactcaagaagctcaacttgagctgcgaaaaactgcagtactgcgatggactttcaggcctcacttccctctcggtgctcaagccttggggatgcccaaagctcccaattcatagtttgatcccacagctgcagctacagactctggatgttcgttgctcaccaggaatggaagcactacgagacttcagtgaaacctcaactttgcggtgttcattttctgacctcagggaaggcattgggttttgggctcttccctatcctgatctctga</cdnaseq>

Protein Sequence

<aaseq>MAGLFATLAIRKALDKLSSILPARSLLASSSSAAAMVRQGQEQD LEDLRMLERTMHRIHATLKDAEQHWDIRDESAKLRLKELKELAYDAEDVVDEYEYEVN RCKAEALQLSASVASHKRKWQQEENEVLYHNTGMVHVPEELALKARKLIKRFHEIQYY SDNFTLSENDGERRFAPNIGTLPKTSSVIYAPKIIGREQDKDNIVEKLLSMTSDSVAT PVSILAIVEQFDPTYITKSIISSLEKDNCGLSEVCSPHETLAKRIKHKMVLLVLDDVW NERRDCWDLLCEPMNTAKLCMIIVTTRSERVAKLVQTMPNFYSLNCLSSEESWSLFKQ VAFTVDNGNTPNLQEIGMSIVKKCKGLPLAIKTLASMLCYETCEQRWKDVIESELWDL EQPRNEVLPSLELSYKNMPIYLKRCFVAISLYPKDYIFDRNQVLQLWKVLDLLQSDRH NNETEIGNRYLDELVERSFLLFLLTKVDGHYYKKYLMHDLIHDLACFLSADEFFRLDD SSTSIEIPQNARYISIQNLASSEISITPLALRAIIVLPRAEVNINNSEALFSKCEKLR ALVLGEGCLDQNLPALMGRLKLLRHLKLVTSFFSHSDPCWDHVDGLRGIGHLNNMLTL PPIHLRNDRIIELRSLNKLRELRIGGLGLHLTIDGAKDARLQSKRHLQLLSLDFGDCC PDHNQQVQLLESLRPHRNLGELIIMNYEGLKYPYWLGDASFSNLSQIELGYSHIQYLP TLGDLPSLVSLHIHDMMIVERIGWEFCSHFHGVKGFPSLTQLRFNWMHKWSEWSGIVD GGFPRLRTLSICHAHSLRLDNIESFPFRSLITLELDKCCCITTIPASTSLRTLRIDRR SFDLRRSSTDGPRLNRLPSLECLTVICHDTTSILLQPQHLPSLKKLNLSCEKLQYCDG LSGLTSLSVLKPWGCPKLPIHSLIPQLQLQTLDVRCSPGMEALRDFSETSTLRCSFSD LREGIGFWALPYPDL</aaseq>

Gene Sequence

<dnaseqindica>5847..5953#3209..5386#2805..3108#1..375#atggccggactgtttgccactcttgccatcaggaaggcactggacaagctctcctccatcctgccagcaagaagcctattggcatcctcctcgtcggcagctgctatggtgaggcaagggcaggagcaagatctggaggacctccggatgctggagcggacgatgcacaggattcacgcgactctgaaggacgcggagcagcactgggacatccgtgatgaaagcgccaagctgcggctcaaggagctcaaggagctagcgtatgacgcggaggacgtggtggacgagtacgagtacgaggtgaaccgttgcaaggctgaggctctccagctatctgcaagcgtggccagccacaagcgtaagtggcaacaggaggtaacactgtcttttccaacaacttcgatctgtttctgcctttactatacttcctcggtgaggaaaaaacagcgaaaccgaaaactgatgaatatatacacacacactggaaatcttagtatgcatgcgtttttttttttaagaaagtcaaaagctttgcctcgtgtatattaatagagcaggggaaaaataaacaagatatatacagggttagccgaggaaaaggactagcccgcaaaaaaggaaaagagctaagtgatatctcccagaattccgaactcctatagggttgttgcccattctttgacccatgctcttccttcctccttgatctttgctaggattgaggacggcgatgacgcagagtttcggaaaattcttgcattgcgttcgcactagatttcccacgagattgaataatcatagtctttagaggcttgcggggggtgtttggggactccgctacgagagtccaccactgcccaacagagtgacaagtttcctaactacccatctaaaggtcggtgcctgtccatctctggatttctgtccatattctctttgttagcctacatttggctaggaggtgtagggccgattcatccaccgtgcagcagagtgggcatatcttttggttttgccatcctcttttctccagtctgtctgccgtccaaaccctgttttgagtgaccaaccaggagaagaatttgcactttggcggcgcctaggccttccagattgattggttgaagacggatcgcgcagccccgaggaattggagtctataggctgattttgtagagtactgcccgtttgctgtgaggttccatcgaatgttgtcttgattttcgtttagcggcctcatgtttctaatcattgtccagaggcggacatagtgttggaggtggctcgcctccgtgatacgagatatttcgatgtctcggatctagttgttttctgatatggcatcgttcactgttctgttctttcttctagaagccaaaaaaatatgagagaatccattatataccactgactttgtcacacgtctacgatttgccactgactttatcatgttctacaatatgccatcgacttttgcttaacttctacaatttaccattgccgtccggttagtctccgttagtactgtacaaatttgtcgaaatgaccaaaatacccctgggagaaaaggtttcaaaatttggataaaaattatgaaatatcatatttcaagtttttggtcaaattttggatgtttacaatcttatgtttataatataatattttgataattttatccaaattttggaagtttgtcataggggtattttggtcatttcaacaaatttgtacagtactaacggtggctaaccggacggcgatggtaaatcgtagaagttaagcaaaagtcgatggcatattgtagaacgtgacaaagtcagtggcaaatcgtaggcgtgcgacaaagtcagtggcatataatggattatctcaaaaaatatccggggcgatctgtttcggagtttgatcatccagccatttcgagctccaaaatcgtgcagttttgccattgcccaccgttattggtgttgcggccgtgaagagatctctatctaacttgttgcacggtagtgccgtccccacccagggtttttctggtgccacccattcattccaaagccatctgagtcgtagtgctgatgtgaatcgttgtagatccatgactccaagaccacccaggtctttgggcctgcagactcttttccaattaactttgcattttccgccagagatgttttcgccccccgcccaaagaaacttcctcctcattatgcatgtgttttgagaacaaacacacacagctgtttcagttagaccagtgtccatgcattttattcaatatagaaagcttgaatacagaaggtttgaacatatagaaagttcttttttctccagaggaattttttagattgaagtttcaatggataatgtgaaatttacgatttgtgtgtgttctaatccttatggattttttttccattttaacagtcttttgagtggtagtttgtgggtccaaaaagtctacattttcagtctaaaaattgtatggtttgagttttactagtacaataatatcaaaagagttgtcccttgtttatgggtcaaaaaaaacatttttcagtctaattttaattcggtagtattgaagcaaaggatattgtatcttgttacaattgcaatttatggtagtaactgaatttaaatggcaataaattacccttaacacatgaagttggagtattattagcccttggatctatgtacaataaacaagtcatagtaatttggtgcaccttaaaaacactcctatatactatatgcaagtatagtgacgcaatccttttcattttatatcttgaaaaaaggaaaatgaggtcttgtaccataatactggtatggtacatgttccagaagagctggctcttaaagcaaggaaacttattaagagattccatgaaatccaatattattctgataattttactttatcggagaatgatggagagagacggtttgctcctaatattggtactctacccaagactagctctgttatatatgcaccgaaaattattggaagagagcaagacaaggacaacattgtagaaaagttgttgtccatgacgagtgacagtgtagctactccagtttctatcttggctattgtcggtatgggtggattaggcaagacaacattggcacagcttgtatataacgactcaaggatacaagggtttttttgacatgcatgcatgggtttgtgtgtcagagcaatttgatcctacttacataacaaagagcatcataagttcattagagaaggataattgtggtctatcggaagtttgtagtcctcatgagacattggcaaaacgaataaagcacaagatggttttacttgtgctggatgatgtatggaatgaacgaagagattgctgggatctgttgtgcgaaccgatgaacacagcaaagttatgtatgattatagtaacaacccgtagtgagagagtggcaaagcttgtgcagacaatgcctaatttctacagcctaaactgcctaagttctgaagagagctggtcattgtttaagcaagttgcttttactgttgacaatggaaacactccaaaccttcaagagatcggaatgtctattgttaaaaagtgtaagggcttacctttagcaattaagacactagccagcatgttgtgctatgaaacatgtgaacagagatggaaagatgtcatagaaagcgagttgtgggacttggagcaaccaaggaatgaggttttgccatccttggagttgagctacaagaacatgcctatatacctaaaacgatgttttgttgccatctctctatatccaaaagactatatattcgatagaaaccaggtgcttcaattgtggaaagtactagacctccttcaaagtgacagacataataatgagactgaaattggaaatagatatctcgatgaattggttgagcggtcatttcttctatttcttctaacaaaggttgatggacattactacaagaaatacttaatgcatgatcttattcacgatcttgcatgctttctttctgcagatgagttctttagacttgatgatagcagtacatccattgaaattccacaaaatgctcggtacatatctatccaaaatttggcatccagtgagatttcaatcacaccacttgctttgagggccatcatagtgttgcctagagcagaagtgaacattaataattcagaagcattattttctaagtgtgaaaagttacgagccctcgtgttaggtgaaggctgtctggatcaaaacttacctgccttaatgggaaggttgaaattactacgccatttgaaacttgtcacaagcttctttagtcactctgatccatgctgggaccacgttgatggactacgtggaattgggcacctaaataacatgcttactttgcctccaattcatctgagaaatgatcgaataatagagctaaggagcttgaacaagctaagggagttgagaataggtgggttgggactgcacttgactatcgatggagcaaaggatgctaggctacagagcaaaaggcacctacaattactaagcttggattttggagattgctgtccagatcacaaccaacaagtgcagctacttgagagcctgcgaccacatcgcaacctcggagaattgataataatgaactacgagggtctgaagtatccctattggttgggcgatgcttccttttccaacttgtctcaaatagaactcggttattctcacattcagtaccttccaacgctcggtgatcttccgtccctcgtgtccctccatatccatgacatgatgattgtcgagcgaattggctgggagttttgcagccattttcatggtgttaagggattcccatcattgacacagttgagattcaattggatgcataagtggtcagaatggtctggaattgttgacggtggatttccacgcctgcgcactctttcgatctgccatgcccacagtctaaggcttgataacattgaatcatttccgttcagatccttgataactctcgaactggacaaatgctgctgcatcacaaccattcctgcatcgacttcactacgcacgctgcgcattgatcggcggagctttgacttgcgcagaagctcaactgatggtccgcggctgaatcgcctcccgtccttggagtgtttaacagtcatctgccatgacaccacaagcatccttcttcagccacagcacctgccttcactcaagaagctcaacttgagctgcgaaaaactgcagtactgcgatggactttcaggcctcacttccctctcggtgctcaagccttggggatgcccaaagctcccaattcatagtttgatcccacagctgcagctacagactctggatgttcgttgctcaccaggtatatatatctgtactactacaaaagacaatagtggtggtgagttggcagcatacatttgcatattttacaaataagtgcctaatattttctgatattatgtaatagttcaatattttttaatcaagttaatgacatatatttaaatatgtatggaattttacccatagcaaagcttgggtattttactagtatgtgtgcaaatgccatatgctctttctgtttctccctcaatggctagctgaccccacatttgttctcacgtttgtctgcatttgcatgtctccacagcttacaatttcaggcactttgattgttaagaatatttgatggccaggatatgttatcggactgctagcttatacggtgagcatttcacaggatttgttacatatcaatgtaattgtctcctgattatctctgcactctgattgaattactcataatctcaaggtcacaggaatggaagcactacgagacttcagtgaaacctcaactttgcggtgttcattttctgacctcagggaaggcattgggttttgggctcttccctatcctgatctctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0493700, RefSeq:Os11g0493700