BGIOSGA003877

From RiceWiki
Revision as of 10:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003877| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003877, complete gene.| tag = OsI_026...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003877

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003877, complete gene.

LocusTag

OsI_02650

Ensembl Transcript ID

BGIOSGA003877-TA

Ensembl Protein ID

BGIOSGA003877-PA

Length

2125

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25741297..25743421

Sequence Coding Region

25741297..25741359,25741485..25741958,25742188..25742361,25742468..25742605,25742727..25742827
,25743148..25743421

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25741297..25743421 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25741297..25743421 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCTGGCCAAGAATGTCCGGCTTTGTAAGCGCGCCTCTCTCCACCATCGCCCGAAACCCGCGAGGGGAAGGATCCTGCACAAGTTCGCGGACCTGGTGGAGCAGCACGTGGAGGAGCTGGCGGCGCTGGACACGGTGGACGCCGGCAAGCTGTTCGCGATGGGGAAGCTCGTCGACATCCCCGGCGGCGCGAACCTGCTCCGGTACTACGCCGGCGCGGCGGACAAGGTGCACGGCGAGACGCTCAAGATGGCGCGGCCGTGCCACGGGTACACGCTCAAGGAGCCCGTCGGCGTCGTCGGCCACATCGTGCCGTGGAACTACCCCACCACCATGTTCTTCTTCAAGGCCAGCCCGGCGCTCGCCGCCGGCTGCACCATGGTCGTCAAGCCCGCCGAGCAGACCCCCCTCTCCGCGCTCTTCTACGCCCACCTCGCCAAGCTTGCCGGCGTCCCCGACGGCGTGCTCAACGTCGTCCCCGGCTTCGGCCCCACCGCCGGCGCCGCTATCTCCTCCCACATGGACATTGACAAGGTGAGCTTCACCGGCTCGACGGAGGTCGGCCGGCTGGTGATGGAGGCGGCGGCGAAGAGCAACCTGAAGCCCGTCTCGCTCGAGCTGGGTGGCAAGTCTCCGGTCATCGTGTTCGACGACGCCGACCTCGACACGGCCGTGAACCTGGTCCACATGGCCTCCTACACCAACAAGGGTGAGATCTGCGTCGCCGGCTCGCGAATCTATGTCCAGGAGGGGATCTACGATGCGTTCGTGAAGAAGGCGACCGAGATGGCCAAGAAATCGGTGGTCGGAGATCCGTTCAACCCGCGAGTTCATCAAGGCCCTCAGATTGACAAGGAGCAATACGAGAAGATCCTCAAGTACATCGACATCGGTAAGCGCGAAGGCGCGACGTTGGTCACCGGAGGGAAGCCCTGCGGCGAAAACGGGACGGTTGAGGAGGCGATCCAGAAGGCGAACAGCACCCGGTACGGCCTGGCTGCCGGCATAGTCACCAAGAACATCGACGTCGCGAACACGGTTTCGCGGTCGATCCGGGCAGGGGCAATCTGGATCAATTGCTACCTCGGCTTCGACCCCGACGTGCCGTTCGGGGGGTACAAGATGAGCGGCTTCGGCAAGGACATGGGCATGGACGCCCTTGAGAAGTACCTCCACACCAAGGCGGTGGTCACCCCTCTCTACAACACCCCTTGGCTATGA</cdnaseq>

Protein Sequence

<aaseq>MALAKNVRLCKRASLHHRPKPARGRILHKFADLVEQHVEELAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLKMARPCHGYTLKEPVGVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGRLVMEAAAKSNLKPVSLELGGKSPVIVFDDADLDTAVNLVHMASYTNKGEICVAGSRIYVQEGIYDAFVKKATEMAKKSVVGDPFNPRVHQGPQIDKEQYEKILKYIDIGKREGATLVTGGKPCGENGTVEEAIQKANSTRYGLAAGIVTKNIDVANTVSRSIRAGAIWINCYLGFDPDVPFGGYKMSGFGKDMGMDALEKYLHTKAVVTPLYNTPWL</aaseq>

Gene Sequence

<dnaseqindica>1..63#189..662#892..1065#1172..1309#1431..1531#1852..2125#ATGGCCCTGGCCAAGAATGTCCGGCTTTGTAAGCGCGCCTCTCTCCACCATCGCCCGAAACCCGTAAACGGGTTGGATCCAAACCCGTTAGTTAATAGTACCAGGCGGCCCATCTAGTTATACCGCACTAATTGGGCCTAATTAAGCCCAGCTTAACTTTGAATTTTTGGCGCCAATAATGGCTGCAGGCGAGGGGAAGGATCCTGCACAAGTTCGCGGACCTGGTGGAGCAGCACGTGGAGGAGCTGGCGGCGCTGGACACGGTGGACGCCGGCAAGCTGTTCGCGATGGGGAAGCTCGTCGACATCCCCGGCGGCGCGAACCTGCTCCGGTACTACGCCGGCGCGGCGGACAAGGTGCACGGCGAGACGCTCAAGATGGCGCGGCCGTGCCACGGGTACACGCTCAAGGAGCCCGTCGGCGTCGTCGGCCACATCGTGCCGTGGAACTACCCCACCACCATGTTCTTCTTCAAGGCCAGCCCGGCGCTCGCCGCCGGCTGCACCATGGTCGTCAAGCCCGCCGAGCAGACCCCCCTCTCCGCGCTCTTCTACGCCCACCTCGCCAAGCTTGCCGGCGTCCCCGACGGCGTGCTCAACGTCGTCCCCGGCTTCGGCCCCACCGCCGGCGCCGCTATCTCCTCCCACATGGACATTGACAAGGTCAGATTACCTACTTGCCATTCTGAATTTCTGAATTCCGATTGATTATGCTTTTTTTTAGATAATGAATTATATTAACCCGGCCTCTACACCTTAGAAGGTGTACACAGCCCAAACCACAATTAAGAGTACATAAGACTTCATCTATTACACGGGGATACCAAATAAAAGTTTAACAAAACGGTTAAAGAAGAACAACAGTCTAAGCCTGATGGTTTTCACTTTTCAGGTGAGCTTCACCGGCTCGACGGAGGTCGGCCGGCTGGTGATGGAGGCGGCGGCGAAGAGCAACCTGAAGCCCGTCTCGCTCGAGCTGGGTGGCAAGTCTCCGGTCATCGTGTTCGACGACGCCGACCTCGACACGGCCGTGAACCTGGTCCACATGGCCTCCTACACCAACAAGGTCGGCCTCTCACCGGCCATGTCGTCAGAAAACCATCTAGCTGGCATAAGCACAACATATTGTGAAAATCTCATCAGCTTTCCACAACAATCCTGTTCTGTTGCAGGGTGAGATCTGCGTCGCCGGCTCGCGAATCTATGTCCAGGAGGGGATCTACGATGCGTTCGTGAAGAAGGCGACCGAGATGGCCAAGAAATCGGTGGTCGGAGATCCGTTCAACCCGCGAGTTCATCAAGGCCCTCAGGTATATATATATGCTAGATCAGTAACCATGCTCTGATTTTTCAACTATACAAACTTCAGATTCAGAGAACCAAAGATGTTCAGCAAGCTGTAATAACCACTTGTGTGCAATTACAACGAAGATTGACAAGGAGCAATACGAGAAGATCCTCAAGTACATCGACATCGGTAAGCGCGAAGGCGCGACGTTGGTCACCGGAGGGAAGCCCTGCGGCGAAAACGGGTACTACATCGAGCCCACCATCTTCACGGACGTCAAGGCATGAACATGACCAGTGTGCTCTTCACTCCTCAGTGCTAAAATATGACCAGCAGCATTTTCAAAGAGAACAAAAATGCACATTTCCAAATCGTGCGAAAAACTAATAGACCCCTTTTGCGCAGGAAGAAATGTCGATCGCGCAAGAGGAAATCTTCGGGCCGGTGATGGCCCTCATGAAATTCAAGTAGGCATCTTTTTCTGAACATTTCCAGCCTGACTAACATCACATGAACATCTAACTGAAAGCCTGAAACCACTGGATCCTGAACATTTTTGCACAGGACGGTTGAGGAGGCGATCCAGAAGGCGAACAGCACCCGGTACGGCCTGGCTGCCGGCATAGTCACCAAGAACATCGACGTCGCGAACACGGTTTCGCGGTCGATCCGGGCAGGGGCAATCTGGATCAATTGCTACCTCGGCTTCGACCCCGACGTGCCGTTCGGGGGGTACAAGATGAGCGGCTTCGGCAAGGACATGGGCATGGACGCCCTTGAGAAGTACCTCCACACCAAGGCGGTGGTCACCCCTCTCTACAACACCCCTTGGCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003877