BGIOSGA003894

From RiceWiki
Revision as of 10:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003894| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003894, complete gene.| tag = B1103C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003894

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003894, complete gene.

LocusTag

B1103C09.14

Ensembl Transcript ID

BGIOSGA003894-TA

Ensembl Protein ID

BGIOSGA003894-PA

Length

660

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25958579..25959238

Sequence Coding Region

25958579..25958770,25958936..25959011,25959111..25959238

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25958579..25959238 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25958579..25959238 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCAAGAGGTCTGAAGAAGGCTTTCCGTTGGTTTCCGCATTCCAATGAAGATCATCATCACCTGGAGGAAGACGAGGGAAGCAGCGAGAGGCGCGGCCTGCTGAGGAGCCACTTGGAACAGGTTGTGCCGGTCACTGATCTTGAAGACGAACCGAACGCATCATCATCAGCTGTGAAAGAACCAAAGACAGTAGCACTGAAGGTGTCTATGCACTGCCATTGCTGCGCGAGGAAGGTTGAGAAGCAAATTTTGAAGATGGAAGGAGTGGTGTCCTTCAAGGTGGAGCTGGAGAACAAGAAGGTGACCGTGGTCGGCAATGTCAACCCCATGGAAGTCCTGGAGAGCATCTGCAAGGTGATGAAGTCTGCACAGATTTTGGCGGCTGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MAARGLKKAFRWFPHSNEDHHHLEEDEGSSERRGLLRSHLEQVVPVTDLEDEPNASSSAVKEPKTVALKVSMHCHCCARKVEKQILKMEGVVSFKVELENKKVTVVGNVNPMEVLESICKVMKSAQILAAA</aaseq>

Gene Sequence

<dnaseqindica>1..192#358..433#533..660#ATGGCTGCAAGAGGTCTGAAGAAGGCTTTCCGTTGGTTTCCGCATTCCAATGAAGATCATCATCACCTGGAGGAAGACGAGGGAAGCAGCGAGAGGCGCGGCCTGCTGAGGAGCCACTTGGAACAGGTTGTGCCGGTCACTGATCTTGAAGACGAACCGAACGCATCATCATCAGCTGTGAAAGAACCAAAGGTGCGTACTACCTTGTTTATGAAATCATCATTTCAGAAAAAAAAATGCATATAGTTGTTTCTGAAATCGAAAGCATTTCTTGCCTTTAGATTTTATCCTCTCTAATTTCTCTGTCAGTAACTTAATGCGGTGTTTTTCTGCATGTACTGCTGCGGTGCACTGCAGACAGTAGCACTGAAGGTGTCTATGCACTGCCATTGCTGCGCGAGGAAGGTTGAGAAGCAAATTTTGAAGATGGAAGGTACATGAATGAATGTGACTGGTAAACACTATGTTCATCGATCTTACTGAAAGCTGATACTCTGATATAGTGATCTCTCTACTCGATTGACATGATCAGGAGTGGTGTCCTTCAAGGTGGAGCTGGAGAACAAGAAGGTGACCGTGGTCGGCAATGTCAACCCCATGGAAGTCCTGGAGAGCATCTGCAAGGTGATGAAGTCTGCACAGATTTTGGCGGCTGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003894