BGIOSGA003919

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Revision as of 10:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003919| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003919, complete gene.| tag = OsI_027...")
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Gene Name

BGIOSGA003919

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003919, complete gene.

LocusTag

OsI_02712

Ensembl Transcript ID

BGIOSGA003919-TA

Ensembl Protein ID

BGIOSGA003919-PA

Length

5983

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26277486..26283468

Sequence Coding Region

26277486..26277618,26279011..26279114,26279217..26279312,26279393..26279512,26279802..26279969
,26280180..26280271,26280998..26281116,26281806..26281929,26282060..26282183
,26282550..26282618,26282729..26282820,26282904..26282981,26283186..26283253
,26283332..26283468

Genome Context

<gbrowseImage1> name=IndicaChromosome01:26277486..26283468 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:26277486..26283468 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGGGGAGGCGGTAGTACCCGAGCCCGCCGCGGCGGCGTCGTCCCCGGCACAGGCTTCGCCTTCGCCGCCCGAGTGGAGGTTCTCGCAGGTGTTCGGCGAGCGCAGCGCTGGGGAGGAGGTCCAGGATGTGGACATCATATCGGCAATAGAATTCAATAAATCAGGACAGCATCTTGCCACTGGGGACAGAGGGGGGCGAGTTGTTTTGTTTGAAAGGACAGATGCCAAGGATAATGCCTGTAGAAAAGAGGCTGAGAAAGTTGATTATTCCGTTAGCAGGCATCCTGAATTTCGCTACAAAACTGAGTTTCAAAGCCATGAACCAGAGTTTGATTATCTGAAGAGCTTGGAAATTGAAGAGAAGATTAACAAGATAAAGTGGTGCCAAACAGCAAATGGAGCATTGTTTCTTCTGTCCACAAATGATAAGACAATAAAGTTTTGGAAGGTTCAAGAAAAGAAGGTCAAAAAGGTATCTGAGATGAATTTGAGCCCTTCAAATGCATCTGCAAATGGTAGACCTGCTGGCAGTAATGCTAGTGGTTCGAGCGCATATCTCCCAAATGGTGGCATTTCAAAACCTGTTGGACTCAATTCGCTTCGCCTGCCTGTGGTGGTTACAAGCCAAGAAACAAGTCTTTCTGCAAGTTGCCGAAGAGTCTTTACGCATGCACATGACTACCATATAAACTCTATTTCAAATAACAGTGATGGTGAGACTTTCATATCAGCAGATGATTTGCGGATAAATCTTTGGAATTTGGAAATTAGCAACCAAAGTTTTAACATTATTGATGTTAAACCTACAAACATGGAGGACCTGACTGAGGTGATAACATCTGCTGAGTTCCACCCTACTCACTGTAATACATTGGCTTATAGTAGCTCAAAGGGCTCCATTCGACTTGTTGACCTGAGGCAGTCAGCCCTTTGTGACACTCATTCCCAAGTCTTTGAGCAGCATGAGGCCCCAGGTTCAAGATCATTCTTTACCGAGATTATAGCCTCGATTTCAGACATAAAGTTTTCCAAGGATGGGAGACATATTCTCAGTCGTGATTACATGACACTGAAGCTTTGGGATATTAACATGAACTCTGGTCCAGTTGCAACATTCCAGGTTCATGAGTATTTAAGGCCCAAGCTATGTGATTTATATGAAAATGATTCCATTTTTGATAAGTTTGAGTGCTGTCAAAGCGGAGATGGATTGCGAGTAGCAACTGGTTCTTACAGCAACATTTTTCGTGTGTTTGGTTGTGGCACTGGTAGCAATGAGGCAACGACACTTGAAGCAACTCGAAACCCTACTAGGAGGCAACTTCAGAATCCCACAAGGCCTGCTAGATCTCTAAGCACTCTGACAAGAGTTGTTAGACGAGGTGCTGAAAGCACCGGAATAGAGGCCAATGGAAATTCCTACGATCTGAGCACAAAGTTGCTCCATCTCGCATGGCACCCATCTGAAAATTTAATTGCTTGTGCCGCTGCGAACAGCTTGTACATGTACTATGCATAA</cdnaseq>

Protein Sequence

<aaseq>MNGEAVVPEPAAAASSPAQASPSPPEWRFSQVFGERSAGEEVQDVDIISAIEFNKSGQHLATGDRGGRVVLFERTDAKDNACRKEAEKVDYSVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSEMNLSPSNASANGRPAGSNASGSSAYLPNGGISKPVGLNSLRLPVVVTSQETSLSASCRRVFTHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIIDVKPTNMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDTHSQVFEQHEAPGSRSFFTEIIASISDIKFSKDGRHILSRDYMTLKLWDINMNSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCQSGDGLRVATGSYSNIFRVFGCGTGSNEATTLEATRNPTRRQLQNPTRPARSLSTLTRVVRRGAESTGIEANGNSYDLSTKLLHLAWHPSENLIACAAANSLYMYYA</aaseq>

Gene Sequence

<dnaseqindica>1..133#1526..1629#1732..1827#1908..2027#2317..2484#2695..2786#3513..3631#4321..4444#4575..4698#5065..5133#5244..5335#5419..5496#5701..5768#5847..5983#ATGAACGGGGAGGCGGTAGTACCCGAGCCCGCCGCGGCGGCGTCGTCCCCGGCACAGGCTTCGCCTTCGCCGCCCGAGTGGAGGTTCTCGCAGGTGTTCGGCGAGCGCAGCGCTGGGGAGGAGGTCCAGGATGGTAAGACGATCCATCGCTTGTCCCCTCTCGGCCCCTCTCGTCGTCGTGGGTTTTTTTTTAATTTTTTTGGGGCGCTCTGGGTGCTGCTAGCTGCTGGATCTTAGTGTTCCTGTGCTCCGGAGCTGGGTACGAGGTGACGGGCGGTGAATGGGCGATGGGATGCCCATGGTCGGGGGGGCCTGATGCTTAGATCGAGTCACCAATTCGCTGCGGCAGCGGTTGCTTCGGATGCGATGCGCTATAGCCCGATGCTTAGGTGTCATGGATGTGGAATTTGCTGCTCCCTCTCCTCCAGATCAGTGCCTTTATCCTGTCGTGTGTAGCACGCAGGTAGTTTTGACTTGTAGATGTGAGGCACTGTGTTCGGTGGTGCAGCTGAGGTGGTTTCATGGGTGATGGACTGATAGGGTGGTAGGGTGCACTCTGTGGGAATCTAGCTGAATGCCATTGTAGGATTATTAGTATATATGCAACTACAGTTATGGATTCAGGGTGGCGTTTGCCAGGTGATAAATGTTGTCGCCGAGTGCAGATGATCTATGATGTTCTCCTCTTCTGCTTAAGTAAGCTCAATAATGTGAATGGTGTGCACTAGAGTTTGCACATGATATGGCCTGTTGTGGTGCTGCATCCGATTATGGTCGCTAGCCGACAAATTGTTGTTATGCTACGCGACTAATGGAGAATTCCAAACATGAATTTAGCGATGTGTGCGCCTTGGACTCATAAATGCCTTTTGGGACTCATGCTGTTGCTTTGCTACTGATGTGTTGTTGTGTCGAGAGCACAGGAGTTTGCTGTCTGACAAACTATTGGAATATTCAGATAAAGCTTGATATATCAATGAAGAAAATATTTTTTTTATTCTTCTCTACCCCAGTTAAAATGGACCTGTTGCATTGTCACCGGTCATATATCTGAAATGCAAAACTTTTAATAGAAAGTAAAGATTTACTCTGCAATTCTAATGTGATCCATTGCTTATTTCATTCTCTGCATTTTGTACTCACATTTTGAAGTAACATGAATATTCTATTAATGATCTCAATTTCCTAGGTCTTTCTGTTTTTCCATTGTGTTGGTTATCAGAGGCAGAACCAAAATACGCTGTAACATTATCTTAGTATATATATTGAGTATCTTTACCTCTATCTTTGAAGTTACACATGACTTGCAACAATTTGTGTTATTTTCTCCTCCAGTTGTCTTAGTTTTTAGTCATTGCTTGTATACACGTGCACCAGGGAAATCATGTGTGGAATGTGGATGCTTTGCCTGCTGTAATACATGTTTCTTCCCTTTATTTCTTGATATTAAATAATAGAGTGACGGAGTATAATATGGTTGTGAACTGCTTTAACATTACTATGTTTCTCTTGTTCCTTTGTGTAGTGGACATCATATCGGCAATAGAATTCAATAAATCAGGACAGCATCTTGCCACTGGGGACAGAGGGGGGCGAGTTGTTTTGTTTGAAAGGACAGATGCCAAGGATGTATGTATATGGAACTGACTGTGCATTTTCACAAAGGAAGTCATATGACCTTGTCTTGTCTCGCTCTGATGACTGAACATATTTTCTTTCTGTTTCCCTTAGAATGCCTGTAGAAAAGAGGCTGAGAAAGTTGATTATTCCGTTAGCAGGCATCCTGAATTTCGCTACAAAACTGAGTTTCAAAGCCATGAACCAGAGGTATATTGTACAAGACTAACTGCTTAGTGAAGTACCTGTAATTTCTGTTGTTTAACTAATTTGTCTTGTCATGCGATTAGTTTGATTATCTGAAGAGCTTGGAAATTGAAGAGAAGATTAACAAGATAAAGTGGTGCCAAACAGCAAATGGAGCATTGTTTCTTCTGTCCACAAATGATAAGACAATAAAGTTTTGGAAGGTATTATTCATCATTTAGAAATCATAGAAATTTCTTGTAAACCAGTATTGCTAAACTGTTGCATGCTTCTTTACATATGTATGTGCAACTCAGTGATAATTTTGAATTTTCTGATGTTCAAAATTTGCTTTACACATTTTAACATCTTGAAAAATGCTTTTTAAATACTTAATGTACTCTGTCCTTTCCAGGTTTATTTGCTACCAAAAGTTTGCCCTGGCAATGGATTATTCTTTTATTCTTGTACTTACCTGAGCTATATTAATCGGAGTTTTTTTTTTATTTGTAGGTTCAAGAAAAGAAGGTCAAAAAGGTATCTGAGATGAATTTGAGCCCTTCAAATGCATCTGCAAATGGTAGACCTGCTGGCAGTAATGCTAGTGGTTCGAGCGCATATCTCCCAAATGGTGGCATTTCAAAACCTGTTGGACTCAATTCGCTTCGCCTGCCTGTGGTGGTAGTACCGAACTTAAAATTTTCATTACCACAAGAAAATCTATTCGAAATTGGTCTCAGACAGTATTATTGAGCTAATTCCTGCCATTTCTGTTGTGCCTAGCATGCATCTTCAACTATTCAGTTGTTTTTATTGCCTCATATGTATTTCCTGTGTTTATTGTAACTTTATTTCTTTGATTTGTTATATTTACTTAACTTTGTATGACAGGTTACAAGCCAAGAAACAAGTCTTTCTGCAAGTTGCCGAAGAGTCTTTACGCATGCACATGACTACCATATAAACTCTATTTCAAATAACAGGTCTTCTACATTATTAATTTTTTTATTTAGTTGTATAATAGATATTATTTGAACTTGTTGCTATTGAATATGACCACGGCCATTAGCTCCAAATGAGTGTTGCTAGAAAAGGGCCTTCTTAAGGGCAAAAGCTTATTTGGTTTCACCTTGCACATGATAACTGCATCTAGCATATTTGTAACCAACCAAGCCACCTAGCTTCACAGTTTCTGCATATATGATAAATTTGCATCCCACAATATGCCAAATTTATTTGCTCTTTGACATACCAGAATAAAGTTCTCAATATCCTTTTAGGGACTCTTTGTTTGATAATCTCAATGTAAAACATACCTTAATGTGCCTTAACTAGTACGGAAATCAGGGTAGCGAAAGCCTAACAGATTCATATCTACTACCTCTGTAGTAAGATTGTATAGTTTTGGGAAGTTCATCTGAACCCTGTAGCCCAAGATCACTATAGTCAATTCATTCTCCACAGGAGATTTTTGATGCTTGTGCCGTATTTGTGTGCGTGCTGAAAATTTGTCATCTGTAGTAATATCGTCTGTGATTGAGCTGTATGCCATCAGCTATAGATAATTTAATACACCACCTCCTACTTTCCATGTGTGTTTGCTATATATTTTGCTGATGTGCATCTCATATACATTCGATTAGATGTAATGTACCCTTTCGAGTTTTATGTAGTGACATATTGTTGCCTGCTCTTTTTTTTTTCCACAGTGATGGTGAGACTTTCATATCAGCAGATGATTTGCGGATAAATCTTTGGAATTTGGAAATTAGCAACCAAAGTTTTAACATTATTGATGTTAAACCTACAAACATGGAGGACCTGACTGGTATAACTTTCAAATCTTCAAACTCTTAGCTATGCTGACTAGTGAGTATTAACATATACAGCCTTTTCTCACACAATGGGAAAAAAATGCAGTCCTATATAGCTACAGTAAGCAAAATTATGTGACTGATGTTCAACCCATGGTCTAGTCATTCTGAATTGTCATGTATTCAAACAGTTCTGCATTATGCTAACTGCTAACACTGTTTCCTTGCATGCAATTATGACAAATAAGTCAGCTAAGCTAAGATGTGTTTTAGTAAAATGGATTTGTGTGATAATTAAGTTTGTATGTCAAAGATGGTTTACTGGTTTTTGTGCAAGTGTATCCTAACCGACCTTTGTTGTTTTACTACACCTTTCAAATTAAGAGGTACTCCCTCCATCCACAAAAGTTAGACATATTACTTTTGACACCAAGACCAAGGAGAAATTAAATCACCTTGGATGTTACAAAATCAAGTAGTGAATGCAAGCATGCAACCAATGAGTATTTAGAGGACTCCTTGGGATCTAATAAAACATTTAATTTATCTCTTCATTTAAGTCTTAAATGCATAAAGACTACAAATAGGAACCACTTATTTGGAAAAACTCAAATGTGAAATATGTGTAACTTTTGTGGATGGAGGGAGTATCATCTATCTGCCCAATGTATTTATTGATATTATTTTATTGTATTGTGTGCAGAGGTGATAACATCTGCTGAGTTCCACCCTACTCACTGTAATACATTGGCTTATAGTAGCTCAAAGGGCTCCATTCGACTTGTTGACCTGAGGCAGTCAGCCCTTTGTGACACTCATTCCCAAGTGTGAGTTTTCATTTGTTACTCATACTCTTTTTCAATATTCAACATAGTTTATTTGGATGAGCATCTGGTGGATTGGCCTGTCTTGTTCGTACTATTTTTTATTATAGCTATTCCTATTCTATGTGTGTAGCTTTGAGCAGCATGAGGCCCCAGGTTCAAGATCATTCTTTACCGAGATTATAGCCTCGATTTCAGACATAAAGTTTTCCAAGGATGGGAGACATATTCTCAGTCGTGATTACATGACACTGAAGGTCTGTACCAGTTTACCTGTTGACATCCCTTTACTTTTTATTGATCTTAGTCATCAAGAAGCATTGATTATGTTGGATATTACTTGGCTACATCATGCTTCAGTTATCCCTAGACAGGATAACCAGATTAGCAGGGCTACCTTTAGATGATCATCTACATATCTGCACTGCATTGCATATACTGCCTCAGATGTTTCATACTTCATTTTTCACTATTATGGTCTCTATATTCATTGTAACTGCTATGGTTTACATTCTGGGAAGCTGGTGATTTATACTATTTTCTGTAGCCATAGAGGTGTTATTTTTCTGCAGCTGTTACTTCGATGTTTTTGTGTTCATATAATTTTTTTCCTTTTGTTCCAGCTTTGGGATATTAACATGAACTCTGGTCCAGTTGCAACATTCCAGGTTCATGAGTATTTAAGGCCCAAGGTAATTCTGTACATGTTAAGATGAATAATCCATACTTCTTTGAGGATCATGAACAATAAACTATTTCACTGGAGTAACTCTGATTCATGTATTGCTTCCTGAAACTGCAGCTATGTGATTTATATGAAAATGATTCCATTTTTGATAAGTTTGAGTGCTGTCAAAGCGGAGATGGATTGCGAGTAGCAACTGGTTCTTACAGGTGTTGCTTTTGCTCATCTCAGTTATGGTACTGCTCGGTCTCCTTCATGTGAACTAATTGTTAGTTGATGTATGCTCTTTCAGCAACATTTTTCGTGTGTTTGGTTGTGGCACTGGTAGCAATGAGGCAACGACACTTGAAGCAACTCGAAACCCTACTAGGTAATCCTTCTCCTATATGAATAATGGAAGCTAACTTTATACTGTACACATCTGCTGTTTATTTCTGCCTGTAAAACTAACTATAATAGTGTTCATCTGATGCGCCTCTACCAGTCCCATTTGCTCCAATGAAGTGGAGTATTTCAAATTCAGCTATTGGCACTAACCATCTTTTCCACTCTTATTTGTGTAATGTGTAACCAGGAGGCAACTTCAGAATCCCACAAGGCCTGCTAGATCTCTAAGCACTCTGACAAGAGTTGTTAGACGAGGTTACCTTCATGATGTGTAGCATGTTTAACTTTGTAGAAGCTCGTCATTTCAACTACTAATTTTGAATCCTTATGCAGGTGCTGAAAGCACCGGAATAGAGGCCAATGGAAATTCCTACGATCTGAGCACAAAGTTGCTCCATCTCGCATGGCACCCATCTGAAAATTTAATTGCTTGTGCCGCTGCGAACAGCTTGTACATGTACTATGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003919

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003919&oldid=41643"