Os11g0498400

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Revision as of 09:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0498400| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001074470.2 GI:297611872 GeneID:4350555| Length = 335...")
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Gene Name

Os11g0498400

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001074470.2 GI:297611872 GeneID:4350555

Length

3359 bp

Definition

Oryza sativa Japonica Group Os11g0498400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19548549..19551907

Sequence Coding Region

19548715..19548882,19549319..19549383,19550642..19550840,19551162..19551650

Expression

GEO Profiles:Os11g0498400

Genome Context

<gbrowseImage1> name=NC_008404:19548549..19551907 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19548549..19551907 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagaagcccgcggcggaggccatggaggaggagttgaagggggaggccgtggggccccgccgccccgggctagggttatggttggcggcgcggcggcggctggcccccgacgaccccttcttcgccgccggggacatggagcgcgagctcctcgccaagcaagttgctctggatctctccgaagatgaacggtaccagcttgagaggatggaagtggcgagtgccaatgcccttttatgcccaatttctggctgtggtgctcatctagattgcctggagaactttgaggaccactatcgcacccgtcatactgcttcatgctctgtatgttggagagtgtatccaacttcaaggctgctgagtattcatatttctgaggcacatgattccttttttcaagcaaaagttgcccgtggttttccaatgtatgagtgtttggtggagggttgtggggtgaagttgaagagctacaaaagtcggcagcagcatcttcttgataagcaccagtttcccaagtcatttgaattcttcaaaaaagcacgcccttcgcaacgccagcggaacaagaaccagaagcaacggcaaacagttcacaagggagacgagacaagcgaaacactaatggatgttgatgggaagaagagctcaaggtacatgaattccagatatcggccaaagcaacatgatggaaaagagtcaaaagaaaatgagcatagtagctgtaaggaggccaagaacaacgaaatggaggttgacaagcaggttgatgagcttgcttcggccgtatcaagactgagcacagcggattcaactccttctagcataagctttggtcatcgtcgctctcgcggtcttgcttttgtccctaggtcgattcggcaaaacaagcaggtttctcagacagaaccaaaatga</cdnaseq>

Protein Sequence

<aaseq>MQQKPAAEAMEEELKGEAVGPRRPGLGLWLAARRRLAPDDPFFA AGDMERELLAKQVALDLSEDERYQLERMEVASANALLCPISGCGAHLDCLENFEDHYR TRHTASCSVCWRVYPTSRLLSIHISEAHDSFFQAKVARGFPMYECLVEGCGVKLKSYK SRQQHLLDKHQFPKSFEFFKKARPSQRQRNKNQKQRQTVHKGDETSETLMDVDGKKSS RYMNSRYRPKQHDGKESKENEHSSCKEAKNNEMEVDKQVDELASAVSRLSTADSTPSS ISFGHRRSRGLAFVPRSIRQNKQVSQTEPK</aaseq>

Gene Sequence

<dnaseqindica>167..334#771..835#2094..2292#2614..3102#aaaaacgaaaaaaaaaaatcaaaatccttccccctttcaaattcgaaatttcgaatcaaacacgcgcacgctcctctctcctctcccctctcgatcgaggcacgcttctccgcggcggcggcgcgcgaccggatcacggcggcgggggaggggaggggaggggaggatgcagcagaagcccgcggcggaggccatggaggaggagttgaagggggaggccgtggggccccgccgccccgggctagggttatggttggcggcgcggcggcggctggcccccgacgaccccttcttcgccgccggggacatggagcgcgagctcctcgccaagcaagtgcgttctcttcccctttcacctcccttccttctgctcgcttaatttgggcgctttagcttcttcgattttacggggattttttttgttagctgtattgagctggaacccgtggaaaagatgaaatagagatagtaaaatcagccatgataacctttgattttgcagaaattcagctgtactgtacataagaggaaaagcttttgcccttctttgaaaaaaaaaagagagaagaaattcagctgcacttagcatcagttaggtgggaattccttaatgctctgcaatacttgtttctttgatttcttgaacggatcatggccgattagctcagataccctgccctgatgtgaaaagtgtagatgaactgtgcttttactcaacaagtcccctatactccactgtttttttaggtgtctgatgttttcttgtttaggttgctctggatctctccgaagatgaacggtaccagcttgagaggatggaagtggcgagtgccaagtaagagattgatctttacttatgcttactctttggattgatgattatttatcctttccgtttcacgccgaattaggggggggggggggttagtccctgtcacatcagatgtttggacactaatttgaagtattaaacgtagactattgacaaaacccactccataaccttggactaattcgcgagacgaatctattgagccaaattaatccatgattagcctatgtgatgctacagtcaacatgtgctaattatggattaattaggcttaaaaaaaatttcacgtgaattagctctcatttatgtaattagttttgtaagtagtctatgtttaatactctaagggcccctttgaatcgtagaaatgaaaaaacggaggaataggaaaaacataggattcgacaggaatataagtgtaaaacagaggattgcaaaacacagggaaaacacatgaatgatcgtttgattggaccagaggaaaaacacaagaatcggatgagagagatagactcaaaggattttttccaagaggttggacctcttgctaagtttcctccaaaacctatatgccataagccattccataggaattttgtaggatttggaaaacttcaatcctttcaatcaaagagctatataggaaaatttcctacaggatttcaattctatgaaattccttcataatttcatttgattcaaaggggcccttaattagtgtctaaacatccgatgtgccagggactacagtttagtccctagatccaaacaccccctaacataccctctctacagatttaaaacagcatgttaatgtactgtttttctgcatccccataacaccataaatttcttcgctgtagctaaggaagtccctgaaccagtggtccacaccccacagtgactaaagtctgagaaaatgacaactggatgtcttgaactaaattattgtacgagttctctagaacctataattcaaaatgattggcgagtattccatcctgacacctgctaaatcatgtcaccttttgcagttgtatgttctctgtgttgtgttagtactgcaagttttggtctcattctgtttatttgatcatatatactactgcaagtttatgtcaccttttgcagttgtatgttctttgtgttgtgttagtactgcaagttttggtctcattctgtttatttgatcatatatactactgcaagttttggtcttatctgttcgatttatttgatcatatgtcttaagctcttgcagtgcccttttatgcccaatttctggctgtggtgctcatctagattgcctggagaactttgaggaccactatcgcacccgtcatactgcttcatgctctgtatgttggagagtgtatccaacttcaaggctgctgagtattcatatttctgaggcacatgattccttttttcaagcaaaagttgcccgtggttttccaatggtaataaattcataatctatccatgcccccagttctttaattggtttaattttgtggcatcatgcacactagccaattttatgcaaacccagaacttccagtggactgtgcctgctggccagtttaaaattactactcaatgtcttagcattagttagcattacatggttttctggtcccgctaatgaagctttccaatttccacatgtcacctttactggcatctgattcttgtataaatttacatagtagtaagtgatacttttatattccctcaactttctatagcaattcacattgtgtatgctatttttgaaacagtatgagtgtttggtggagggttgtggggtgaagttgaagagctacaaaagtcggcagcagcatcttcttgataagcaccagtttcccaagtcatttgaattcttcaaaaaagcacgcccttcgcaacgccagcggaacaagaaccagaagcaacggcaaacagttcacaagggagacgagacaagcgaaacactaatggatgttgatgggaagaagagctcaaggtacatgaattccagatatcggccaaagcaacatgatggaaaagagtcaaaagaaaatgagcatagtagctgtaaggaggccaagaacaacgaaatggaggttgacaagcaggttgatgagcttgcttcggccgtatcaagactgagcacagcggattcaactccttctagcataagctttggtcatcgtcgctctcgcggtcttgcttttgtccctaggtcgattcggcaaaacaagcaggtttctcagacagaaccaaaatgacagcatttgataccatctttctcttcattgctgatctcggatgcatcaacaatcctgaatgtgctgtttcctgtacctggacattcaccgaatccactaatatacattcttgtagttgtatcacgagatatgtcttctagctggttatccttgcttatggatgtactgagcttcctgttactgccatgtagtagaacaatttttctgaagcggcaaatatgaagtgcaaaatacaagacagttcttgtggttgatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0498400, RefSeq:Os11g0498400