Os11g0498600

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Revision as of 09:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0498600| Description = Similar to HVA22 protein| Version = NM_001074471.1 GI:115485590 GeneID:4350556| Length = 1255 bp| Definition = Oryz...")
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Gene Name

Os11g0498600

Description

Similar to HVA22 protein

Version

NM_001074471.1 GI:115485590 GeneID:4350556

Length

1255 bp

Definition

Oryza sativa Japonica Group Os11g0498600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19555552..19556806

Sequence Coding Region

19555645..19555691,19555818..19555844,19555945..19556067,19556171..19556414,19556514..19556531

Expression

GEO Profiles:Os11g0498600

Genome Context

<gbrowseImage1> name=NC_008404:19555552..19556806 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19555552..19556806 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaagctctggacaatcctcactcacgttcattcccttgcagggcctaccgtcatgctcctgtaccccttgtatgcgtcggtgcaggccatggagagcccatcgaagcttgacgacgagcagtggctggcctactggatcctctactccttcatcaccctcgtggagatgcttctcgagtccctcatctactggataccgatctggtacgagctgaagctgctgttcatcgcgtggctggcgctgcccaacttcaggggagccgcgttcatctacaacaggttcgtcagggagcagctcaggaagcatggcctcgccggcgccggcgccggcgccgccgccagcgtcggcaagaaggacaagtcgtcgccgtcgtcgtcacccaaggacaaggagaagaccaagagcaagttcctctccttcgtcactcccaagaaggatcatgaagcttactga</cdnaseq>

Protein Sequence

<aaseq>MGKLWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWL AYWILYSFITLVEMLLESLIYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQLR KHGLAGAGAGAAASVGKKDKSSPSSSPKDKEKTKSKFLSFVTPKKDHEAY</aaseq>

Gene Sequence

<dnaseqindica>94..140#267..293#394..516#620..863#963..980#aatcgatcactccactggtgagtagtgagtggctagtgactggtcagttcatcacttgtgaaggttttgcaatcaggaaaagttcagaagatcatgggcaagctctggacaatcctcactcacgttcattcccttgcagggtacatatggtttctattcttgtaatgttaatatgcacttagctgcagttaaatttaagcttaaacagttaaaactgattcctgtgaattttctttctgctgccctttgtggttggttggttgcaggcctaccgtcatgctcctgtaccccttgtaagttcagagattttctctctattagcttttcttcttcttctttttataagttcatgtgattgaatgtttaattttgagatgattttggttggtgcaggtatgcgtcggtgcaggccatggagagcccatcgaagcttgacgacgagcagtggctggcctactggatcctctactccttcatcaccctcgtggagatgcttctcgagtccctcatctactggttgaattcgattaacccatctcatcttgatcttgatcgagcagatatggattaatttcagaaagaactcattcataaaagtactatgattttgttcgatcaggataccgatctggtacgagctgaagctgctgttcatcgcgtggctggcgctgcccaacttcaggggagccgcgttcatctacaacaggttcgtcagggagcagctcaggaagcatggcctcgccggcgccggcgccggcgccgccgccagcgtcggcaagaaggacaagtcgtcgccgtcgtcgtcacccaaggacaaggagaagaccaagagcaagttcctctccttcgtcactcccaagaaggtgagttcttaaacctcgagcagcatcagtctcttttttttttcttgattaatcttggctgaaatttgatccatgttctttgtgtcttcgttatgtcaggatcatgaagcttactgagccaagaagtgctgatcagtcggatccctgaagatagttttttagtgtgtgtactgttccatttgtgtttgtccctcttcctctccttcagaagaggcagctagctagcttcatgtttggctggtctttttggccatctgtgcatgtctgtaaactttattggagtgaggggaaaaaagagcataattagttgctccatgttgagttgttagagtggtttcttgtaaatgtaattcaggatctcagatgagcagacaataaaaacacactgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0498600, RefSeq:Os11g0498600