BGIOSGA004018

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Revision as of 11:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004018| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004018, complete gene.| tag = P0501G0...")
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Gene Name

BGIOSGA004018

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004018, complete gene.

LocusTag

P0501G01.25

Ensembl Transcript ID

BGIOSGA004018-TA

Ensembl Protein ID

BGIOSGA004018-PA

Length

4519

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27976091..27980609

Sequence Coding Region

27976091..27976302,27976571..27976692,27976789..27976877,27976969..27977004,27977423..27977522
,27977673..27977715,27977794..27977885,27978188..27978246,27978324..27978823
,27978901..27978982,27979074..27979639,27979730..27979865,27979960..27980022
,27980152..27980382,27980496..27980609

Genome Context

<gbrowseImage1> name=IndicaChromosome01:27976091..27980609 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:27976091..27980609 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCACGGGAGCATCATCGCGTCGGCCGTGGGGGTGGGCGTCGGGGTGGGGGTCGGCATCGGCCTCGTCTCGTCGCGGCTGACCGGGTTGGCGACTGGCGGCGGCGGCGGCGGCGCCACGGCGGCGGAGGTGGAGGCGGAGCTGCGGTGTCTGGTGGTGGACGGCCGCGACGTCGGCGTCTCCTTCGACGACTTCCCGTACTACCTCAGCGAGCAGTCGAAGCTGGCCCTCACCAGCACGGCGTTCGTGCATCTGAGCCCAACGATCCTGCCCAATCACATCCGCGTCCTCTCCGCGTCCAGCCGCACCATACTGCTCTGCGGCCCATCAGAGGCGTACCTTCAGTCGCTCGCGAAGGCTCTCGCAAACCAGTTCAGTGCTCGCCTGCTGCTGCTCGATGTCATCGACTTCGCGTGCAAGCTCCATCATAAGTACGGCGGTCCAAGCAATACACAGACCCGTGAGAGATCCATGACAGAGGCAGCCTTCTATAGAGTGTCTAGTTTGGTTGGAGCTTTCAATCTGTTTCGCAAGAAGGAAGAACCAACTGGAACAGGACCATTGAGCCGTGAAACAGGCATCCTTGATCTCAGGACTAGCACTTGTCCTCATAACACACCTTCAGTACGGGTTCAGTTATCCTTGGTACCTCCCGAGAAGGACCATGATCCCGAATCTTCTAAATACCTTGCATCAGTTAAACCATGCTGGAGTTTGAATGAGAAGGTTCTCATACAATCCCTTTACAAGATTATAGTTTCTGCTTCTGAAATCAGTCCAGTCATTCTTTACATAAGGGATGTTGATGACTTGCTTGGAAGTTCAGAAAAAGCATACTGTATGTTTCAGAAAATGTTGAAAAAACTATCTGGACGGGTAATCGTGATTGGTTCACAATTCCTCGATGATGATGAGGATAGAGAAGATATTGAAGAATCTGTGTGTGCTCTTTTCCCTTGTATTCTGGAGACAAAGCCTCCCAAAGACAAGGCCCTTCTTGAGAAATGGAAGACCCAGATGGAGGAAGATTCGAATAATAACAATAATCAAGTCGTTCAAAACTACATCGCGGAAGTGCTCGCAGAAAACAATCTTGAGTGTGAAGATTTGAGCTCGATCAATGCAGATGATGATTGTAAAATCATTGTGGCTTACTTAGAAGAAATTATAACCCCAGCTGTCTCTTACCATCTGATGAATAACAAGAACCCTAAATACAGAAACGGGAATCTTGTCATATCTTCGGAGAGCTTATCCCATGGATTACGCATATTCCAAGAGAGCAACGACCTTGGGAAAGATACAGTGGAAGCAAAGGATGAGACAGAGATGGTCGTTCCAGACAATGAGTATGAAAAGAAGATCCGACCAACGGTTATACCAGCCAATGAAATAGGAGTGACATTTGATGACATTGGAGCACTGGCTGATATCAAAGAATGCCTTCACGAGCTTGTCATGCTTCCTCTTCAACGACCTGATTTCTTCAAAGGTGGTCTCTTGAAGCCATGCAAGGGCGTTCTGCTGTTTGGGCCACCTGGTACGGGGAAAACAATGCTCGCCAAGGCCCTAGCAAACGCAGCAGGAGCTAGCTTCTTGAACATCTCTATGGCTAGTATGACATCAAAATGGTACGGGGAGTCTGAGAAGTGCATCCAAGCCTTATTCAGCCTTGCTGCTAAACTTGCACCAGCAATCATTTTCATCGATGAGGTAGACAGCATGCTAGGGAAACGAGATAACCATAGCGAAAATGAGGCATCCCGCAGAGTAAAAAATGAGTTCATGGCTCACTGGGATGGACTCTTGTCTAAGTCCAATGAAAGGATATTAGTCCTTGCTGCAACGAACAGGCCCTTTGACCTTGATGATGCGGTGATAAGGAGATTTGAGCACAGAATCATGGTCGGCCTCCCAACGTTGGAGAGTAGAGAGCTGATTCTGAAGACATTGTTGTCGAAAGAGACGGTTGAAAATATTGATTTCAAGGAGCTTGCCAAAATGACTGAAGGATACACCAGCAGTGACTTGAAGAATATTTGCGTGACGGCAGCTTATCATCCTGTCAGAGAGCTACTTCAGAAAGAAAAGAACAAGGTCAAGAAGGAAACTGCACCAGAAACGATGCAAGAACCAAAAGAAAAGACCAAAATTCAAGAAAACGGGACAAAAAGTTCGGATAGTAAGACTGAAAAGGACAAGCTTGACAACAAGGAAGGTAAGAAAGACAAGCCTGCTGACAAGAAAGATAAATCAGACAAAGGCGATGCTGGAGAGACTACCCTGAGACCGCTAAACATGGAGGACTTGAGAAAGGCAAAGGATGAAGTCGCCGCTAGCTTCGCTAGCGAAGGCGTTGTGATGAATCAGATCAAGGAATGGAATGAGCTCTACGGCAAAGGCGGGTCGAGGAAGCGGGAGCAACTGACATACTTCTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MEHGSIIASAVGVGVGVGVGIGLVSSRLTGLATGGGGGGATAAEVEAELRCLVVDGRDVGVSFDDFPYYLSEQSKLALTSTAFVHLSPTILPNHIRVLSASSRTILLCGPSEAYLQSLAKALANQFSARLLLLDVIDFACKLHHKYGGPSNTQTRERSMTEAAFYRVSSLVGAFNLFRKKEEPTGTGPLSRETGILDLRTSTCPHNTPSVRVQLSLVPPEKDHDPESSKYLASVKPCWSLNEKVLIQSLYKIIVSASEISPVILYIRDVDDLLGSSEKAYCMFQKMLKKLSGRVIVIGSQFLDDDEDREDIEESVCALFPCILETKPPKDKALLEKWKTQMEEDSNNNNNQVVQNYIAEVLAENNLECEDLSSINADDDCKIIVAYLEEIITPAVSYHLMNNKNPKYRNGNLVISSESLSHGLRIFQESNDLGKDTVEAKDETEMVVPDNEYEKKIRPTVIPANEIGVTFDDIGALADIKECLHELVMLPLQRPDFFKGGLLKPCKGVLLFGPPGTGKTMLAKALANAAGASFLNISMASMTSKWYGESEKCIQALFSLAAKLAPAIIFIDEVDSMLGKRDNHSENEASRRVKNEFMAHWDGLLSKSNERILVLAATNRPFDLDDAVIRRFEHRIMVGLPTLESRELILKTLLSKETVENIDFKELAKMTEGYTSSDLKNICVTAAYHPVRELLQKEKNKVKKETAPETMQEPKEKTKIQENGTKSSDSKTEKDKLDNKEGKKDKPADKKDKSDKGDAGETTLRPLNMEDLRKAKDEVAASFASEGVVMNQIKEWNELYGKGGSRKREQLTYFL</aaseq>

Gene Sequence

<dnaseqindica>1..212#481..602#699..787#879..914#1333..1432#1583..1625#1704..1795#2098..2156#2234..2733#2811..2892#2984..3549#3640..3775#3870..3932#4062..4292#4406..4519#ATGGAGCACGGGAGCATCATCGCGTCGGCCGTGGGGGTGGGCGTCGGGGTGGGGGTCGGCATCGGCCTCGTCTCGTCGCGGCTGACCGGGTTGGCGACTGGCGGCGGCGGCGGCGGCGCCACGGCGGCGGAGGTGGAGGCGGAGCTGCGGTGTCTGGTGGTGGACGGCCGCGACGTCGGCGTCTCCTTCGACGACTTCCCGTACTACCTCAGGTTCGTCCCGTCGTCGATGCGAATCCTCAGAGCCAAAAACCCCCCAATCCAATGTGGGAGAAGGAAAAAAAAAACCAAACCTTTTTTTTCCCTTATTTTGACCGGTAGCTTTATCGATTAGTTTATGACTTTGCTGGTATATTTCGGGTAGGATCACATGATTTAATTACTGATCCCATGGATACGCGTTGCGTCGTCAGTAGAAATCAATGCGGTGTTTGGTGAAGGGCGGCTAATTGAGCATGTGTTTCCCATGGTTTTCTTGCAGCGAGCAGTCGAAGCTGGCCCTCACCAGCACGGCGTTCGTGCATCTGAGCCCAACGATCCTGCCCAATCACATCCGCGTCCTCTCCGCGTCCAGCCGCACCATACTGCTCTGCGGCCCATCAGGTTCGCCCTCCGCTTCCTGAACCGCAATGTGCGTTGTTCGTTTTCGCCAAAAGCGCGATCTTTTTTTTTCTCACAGCCGCTGTTTCTCTGTTGCAGAGGCGTACCTTCAGTCGCTCGCGAAGGCTCTCGCAAACCAGTTCAGTGCTCGCCTGCTGCTGCTCGATGTCATCGACTTCGCGTGCAAGGTCAGTTAGATGCAATTTGAGAAATTTTAGCTTTGTTGTCGCCCTGGCCTCTTATGATCCTAAACTGTTCTTTTCCCGATTGCCATTGCAGCTCCATCATAAGTACGGCGGTCCAAGCAATACACAGGTCTGTATCCTATTTCTGCCTTCTTGTTCTAGGTGGTAACTGGTAGTTCCATCTTGTATAGCACATTTGGTTGATATACCAAGCGACATGGGAAATTCAGGATTTTCATTTCTGTTTATCAGTTTGGCCTTTTTTTTTCCTTCATGAGTCAAAGTAAAACATGGTGTCCCTGTTGAAACAATGGGTACTTTTCTTTAGATTATGGAATAGCGTTTTACGATTCCGGCCTCTGCACAACTTAAACGGGGTACTTGAGGAGGATAGAACCTAGTCTACTCTGTCCACACTGAACAATTTAGCTAGTAGAGTTGCTGAATGTGCAGTTTTTTTCGAACAGGAGCATTTGTTACAATTTTGTGAAGTGGCGTGGATTTGTCTGATGATTTACCTAATAAATTCTGATCTGTTCATAACACAGACCCGTGAGAGATCCATGACAGAGGCAGCCTTCTATAGAGTGTCTAGTTTGGTTGGAGCTTTCAATCTGTTTCGCAAGAAGGAAGAACCAACTGGAACAGGTACCCTGTTTCTTCCTGTTGTGCACTTTCTTTGCCTGTTTACTTTCTGCAATGCTTTATCCTTCTTTCTCTCAATCATGATTTTGAAGCGATGCCCATGCTCCAACTTTTCTGATGTTCTGACTGTGTCTTCATGAAACACTAATGTAGGACCATTGAGCCGTGAAACAGGCATCCTTGATCTCAGGACTAGGTAATATCTCTGCCTGGATATGCAACTAGAGGTATTGGATATTGATTTTCTGAGCATTTTATGCTATTGCTTTTGCAGCACTTGTCCTCATAACACACCTTCAGTACGGGTTCAGTTATCCTTGGTACCTCCCGAGAAGGACCATGATCCCGAATCTTCTAAATACCTTGGTGAGTGAAATCCATTTTTTTATGCTCTCTTGTTTATTTATGCCCCAATTGCACATGTGCACATTAGATGTATAATGCATATGTTGCCAGCTTCAACTAGTTTCAGACAACCCAACATCCTCATTTACCTGTATATTCAAATGTGCCTGCCCATGAGGGTTCCTCCAACTGAAATCTGCAGTTATCCTAACCTGCCTAGTTTTTAGCTATCTGTAGATCACCCTCTCTTTTGCATTTTAAGTACAGTGCAATATGAGTCATAATTTGAAACCACGAGTCTTACAGTCCCTCTTTTGATGCAGCATCAGTTAAACCATGCTGGAGTTTGAATGAGAAGGTTCTCATACAATCCCTTTACAAGGTAACTCAGTTATTCAGCAGTATAGTCCAAATTTACGTGCCCTATTTGTACAAGCTGATATTGGATGGCTTTTGCAGATTATAGTTTCTGCTTCTGAAATCAGTCCAGTCATTCTTTACATAAGGGATGTTGATGACTTGCTTGGAAGTTCAGAAAAAGCATACTGTATGTTTCAGAAAATGTTGAAAAAACTATCTGGACGGGTAATCGTGATTGGTTCACAATTCCTCGATGATGATGAGGATAGAGAAGATATTGAAGAATCTGTGTGTGCTCTTTTCCCTTGTATTCTGGAGACAAAGCCTCCCAAAGACAAGGCCCTTCTTGAGAAATGGAAGACCCAGATGGAGGAAGATTCGAATAATAACAATAATCAAGTCGTTCAAAACTACATCGCGGAAGTGCTCGCAGAAAACAATCTTGAGTGTGAAGATTTGAGCTCGATCAATGCAGATGATGATTGTAAAATCATTGTGGCTTACTTAGAAGAAATTATAACCCCAGCTGTCTCTTACCATCTGATGAATAACAAGAACCCTAAATACAGAAACGGGAATCTTGTCATATCTTCGGAGAGGTTAGCTAAATTTACTTTGAGTTTGAGGTGGTCCATTGTTGCTTTATCTCGCTTTTGCTAACATGGCACTTTCACAGCTTATCCCATGGATTACGCATATTCCAAGAGAGCAACGACCTTGGGAAAGATACAGTGGAAGCAAAGGATGAGACAGAGATGGTAATACATTGTTTCAACTACAATAAGTTATAATTAAGTAATTTTCCTAGTTTAATTACATGTTTAAAATTTTGCTATTCTTAACTTACAGGTCGTTCCAGACAATGAGTATGAAAAGAAGATCCGACCAACGGTTATACCAGCCAATGAAATAGGAGTGACATTTGATGACATTGGAGCACTGGCTGATATCAAAGAATGCCTTCACGAGCTTGTCATGCTTCCTCTTCAACGACCTGATTTCTTCAAAGGTGGTCTCTTGAAGCCATGCAAGGGCGTTCTGCTGTTTGGGCCACCTGGTACGGGGAAAACAATGCTCGCCAAGGCCCTAGCAAACGCAGCAGGAGCTAGCTTCTTGAACATCTCTATGGCTAGTATGACATCAAAATGGTACGGGGAGTCTGAGAAGTGCATCCAAGCCTTATTCAGCCTTGCTGCTAAACTTGCACCAGCAATCATTTTCATCGATGAGGTAGACAGCATGCTAGGGAAACGAGATAACCATAGCGAAAATGAGGCATCCCGCAGAGTAAAAAATGAGTTCATGGCTCACTGGGATGGACTCTTGTCTAAGTCCAATGAAAGGATATTAGTCCTTGCTGCAACGAACAGGCCCTTTGACCTTGATGATGCGGTGATAAGGAGATTTGAGCACAGGTATGTTTCGTTTATGTGTATCTAAACTTCTATTTGATTAAATTCAGCTTCTCTAGATGAGTTTTTTTATGAGTCATTTGTGTTAAATAGAATCATGGTCGGCCTCCCAACGTTGGAGAGTAGAGAGCTGATTCTGAAGACATTGTTGTCGAAAGAGACGGTTGAAAATATTGATTTCAAGGAGCTTGCCAAAATGACTGAAGGATACACCAGCAGTGACTTGAAGGTCTGTACACTGCTTTTGGACTTTTCGTATTATAAAGAAGATTTATTTAGTCGTCACTCTCTGAAATATTAAATCTGTACTTTTTTTTCTTCAGAATATTTGCGTGACGGCAGCTTATCATCCTGTCAGAGAGCTACTTCAGAAAGAAAAGAACAAGGTAAAACCCAAGAGGAACGGATAACTATAATTTAACTTTTCCCTGATGAAACCTGCAAACTCCATTACCGGGTGCTTGATAAAGCGAATCATCATCTCACAGTGACTAATGGCAATTTTGATTCTCCAGGTCAAGAAGGAAACTGCACCAGAAACGATGCAAGAACCAAAAGAAAAGACCAAAATTCAAGAAAACGGGACAAAAAGTTCGGATAGTAAGACTGAAAAGGACAAGCTTGACAACAAGGAAGGTAAGAAAGACAAGCCTGCTGACAAGAAAGATAAATCAGACAAAGGCGATGCTGGAGAGACTACCCTGAGACCGCTAAACATGGAGGACTTGAGAAAGGCAAAGGATGAAGTAAGTCACTGACGGATTCTTCATGATACACACGCAATGTACTTATCTTAGCTATCTATCCTTTTCACAGCAAGAACATATTGCTAAGCTGTTGCGCATTGAACACTATGCAGGTCGCCGCTAGCTTCGCTAGCGAAGGCGTTGTGATGAATCAGATCAAGGAATGGAATGAGCTCTACGGCAAAGGCGGGTCGAGGAAGCGGGAGCAACTGACATACTTCTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004018

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004018&oldid=41742"