BGIOSGA004039

From RiceWiki
Revision as of 11:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004039| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004039, complete gene.| tag = P0688A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004039

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004039, complete gene.

LocusTag

P0688A04.39

Ensembl Transcript ID

BGIOSGA004039-TA

Ensembl Protein ID

BGIOSGA004039-PA

Length

1359

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28250470..28251828

Sequence Coding Region

28250470..28251828

Genome Context

<gbrowseImage1> name=IndicaChromosome01:28250470..28251828 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:28250470..28251828 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTTTCTTTCCCGCGCCGCCGCCGTCTCCCTCCTCGCCATCGTCCTCGTCCTGACTGCCGCCACGTCCACCTCCCCTGCGGCCGCGGCCGCTCGGTTCCCGGAGGAGGCGCGCCCCACGAGGTCGGGGTACCTCAACGTCACGTCCACCAACTCACTCTACTTCGCCTTCTACGAGGCCACCGACCCGGTCACCACGCAGCCGGCCGCCGTGCCGCTCCTCGTTTGGCTCCAGGGCGGCCCCGGCTGCTCCTCCCTCATCGGCAGCTTCGCCGAGCTCGGCCCCTACCTCCTCCTCGACTCCACCTCCGCCCTCGCCCGCAACGACAACCGGTGGAACCGCCGCTTCGGCGTGATCTTCATCGACAACCCGCTCGGCGCCGGTTTCAGCGCGCCTGCCTCCGGCGACGACATCCCGACCGACGAGCGCACCATCGCCGCGCACCTCCTCGCGGCCCTGCAGTCGTTCATGGCGCTCGATCCGGCCTTCCGCGCGCGCCCGCTGTTCCTCACCGGGGAGAGCTACGCCGGCAAGTACATCCCCGCGGCCGCGTCGCACATCCTCGACGCCAACGCCAAGCTCACGGACGACCGTAGGGTGAACCTCCAGGGCATCGCCATCGGCAACGGCATGACGCACCCGGTGGCGCAGGTGACCGTGCACGCCGACCAGGCCTACTTCGCCGGGCTGATCAACGCCGAGCAGAAGGCCAAGGTCGAAGAAATGCAGGACAAGACGGTAAGCCTGATCAAATCCAAGAAGTGGGCCGCGGCGAGGAGGGAGAGGAACAGGATCATAGCGTTCCTCAAGAACGCCACCGGCGTCGCTACGCCGTTCAACTACGCGCGGGAGAAGGGGTACCCGACGCGGCCGCTCCGGGACTTCCTCAACACCGGCGAGGCGAAGGCGGCGCTGGGCGCGAGGAGCGACGTGGAGTGGGCGCGCTGCAGCGAGGCCGTGTCGGCGGCGCTCGCCGACGACATCATGAGGAGCGCCAGGGGCGACGTGGAGGCCGTCTTCCTGGCGCCGGATGGCGTCCGGGTGCTGCTGTTCCAGGGCGTGTTCGACCTGCACAGCGGGCCGGCGTCCGTGGAGGCGTGGGTGAGGGAGCTGGCGTGGCCTGGCCTGGGCGCGTTCCTCGCCGCGGAGCGCGCCGTGTGGCGGCTCGGGGACGAGCAGCTCGCCGGGTACGTGCAGAGGTCGGGGGCGCTCGCGAATGCGGTCATCGTCGGGGCCGGGCACATGGCGGCCGGCGACAACCGGCCGGCGGCGCAGGCGATGATCGAGGGATGGGTGTTGCAGACGGGGCCGTTCGACGGAAGCGGTCAACGAGTCGTTGGCTCCTTATTCTGA</cdnaseq>

Protein Sequence

<aaseq>MASFLSRAAAVSLLAIVLVLTAATSTSPAAAAARFPEEARPTRSGYLNVTSTNSLYFAFYEATDPVTTQPAAVPLLVWLQGGPGCSSLIGSFAELGPYLLLDSTSALARNDNRWNRRFGVIFIDNPLGAGFSAPASGDDIPTDERTIAAHLLAALQSFMALDPAFRARPLFLTGESYAGKYIPAAASHILDANAKLTDDRRVNLQGIAIGNGMTHPVAQVTVHADQAYFAGLINAEQKAKVEEMQDKTVSLIKSKKWAAARRERNRIIAFLKNATGVATPFNYAREKGYPTRPLRDFLNTGEAKAALGARSDVEWARCSEAVSAALADDIMRSARGDVEAVFLAPDGVRVLLFQGVFDLHSGPASVEAWVRELAWPGLGAFLAAERAVWRLGDEQLAGYVQRSGALANAVIVGAGHMAAGDNRPAAQAMIEGWVLQTGPFDGSGQRVVGSLF</aaseq>

Gene Sequence

<dnaseqindica>1..1359#ATGGCGTCGTTTCTTTCCCGCGCCGCCGCCGTCTCCCTCCTCGCCATCGTCCTCGTCCTGACTGCCGCCACGTCCACCTCCCCTGCGGCCGCGGCCGCTCGGTTCCCGGAGGAGGCGCGCCCCACGAGGTCGGGGTACCTCAACGTCACGTCCACCAACTCACTCTACTTCGCCTTCTACGAGGCCACCGACCCGGTCACCACGCAGCCGGCCGCCGTGCCGCTCCTCGTTTGGCTCCAGGGCGGCCCCGGCTGCTCCTCCCTCATCGGCAGCTTCGCCGAGCTCGGCCCCTACCTCCTCCTCGACTCCACCTCCGCCCTCGCCCGCAACGACAACCGGTGGAACCGCCGCTTCGGCGTGATCTTCATCGACAACCCGCTCGGCGCCGGTTTCAGCGCGCCTGCCTCCGGCGACGACATCCCGACCGACGAGCGCACCATCGCCGCGCACCTCCTCGCGGCCCTGCAGTCGTTCATGGCGCTCGATCCGGCCTTCCGCGCGCGCCCGCTGTTCCTCACCGGGGAGAGCTACGCCGGCAAGTACATCCCCGCGGCCGCGTCGCACATCCTCGACGCCAACGCCAAGCTCACGGACGACCGTAGGGTGAACCTCCAGGGCATCGCCATCGGCAACGGCATGACGCACCCGGTGGCGCAGGTGACCGTGCACGCCGACCAGGCCTACTTCGCCGGGCTGATCAACGCCGAGCAGAAGGCCAAGGTCGAAGAAATGCAGGACAAGACGGTAAGCCTGATCAAATCCAAGAAGTGGGCCGCGGCGAGGAGGGAGAGGAACAGGATCATAGCGTTCCTCAAGAACGCCACCGGCGTCGCTACGCCGTTCAACTACGCGCGGGAGAAGGGGTACCCGACGCGGCCGCTCCGGGACTTCCTCAACACCGGCGAGGCGAAGGCGGCGCTGGGCGCGAGGAGCGACGTGGAGTGGGCGCGCTGCAGCGAGGCCGTGTCGGCGGCGCTCGCCGACGACATCATGAGGAGCGCCAGGGGCGACGTGGAGGCCGTCTTCCTGGCGCCGGATGGCGTCCGGGTGCTGCTGTTCCAGGGCGTGTTCGACCTGCACAGCGGGCCGGCGTCCGTGGAGGCGTGGGTGAGGGAGCTGGCGTGGCCTGGCCTGGGCGCGTTCCTCGCCGCGGAGCGCGCCGTGTGGCGGCTCGGGGACGAGCAGCTCGCCGGGTACGTGCAGAGGTCGGGGGCGCTCGCGAATGCGGTCATCGTCGGGGCCGGGCACATGGCGGCCGGCGACAACCGGCCGGCGGCGCAGGCGATGATCGAGGGATGGGTGTTGCAGACGGGGCCGTTCGACGGAAGCGGTCAACGAGTCGTTGGCTCCTTATTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004039