BGIOSGA004047

From RiceWiki
Revision as of 11:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004047| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004047, complete gene.| tag = OsI_029...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004047

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004047, complete gene.

LocusTag

OsI_02958

Ensembl Transcript ID

BGIOSGA004047-TA

Ensembl Protein ID

BGIOSGA004047-PA

Length

2461

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28394397..28396857

Sequence Coding Region

28394397..28394979,28396509..28396603,28396696..28396857

Genome Context

<gbrowseImage1> name=IndicaChromosome01:28394397..28396857 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:28394397..28396857 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTCCAGTGATTTGAGTTCAGAGATGAGGAGGACGGTTCTTGGCCTAACATTGTGGGTCTGGATTGCAATTGGTGTGGTCGCTCTTCTAGTTGCCATTCTGCTGATGATATGCATTTGGATGGCATCCCGCCGCAAGACGAAGAGAACAATGGACAATTTGAGGCAAACACAGATCCCCATTTTCTCCAAGGAGATCCCGGTTGACAGGGTTGGCGGCCGCAGCCTTGCGCAGACAATGCATGAACGTGAGCAGCCTAGCTTCCCACCGCAAGACAAGCACACAAACCGGGAGCCGGGGAAGACGCTGGGGCATATGGCACTGAGCAAGTCATCGGAACCTGACAACATGAGCCAGGGGAGCTCAGTTTGCAATGTTGACCGTGCTGGTAGTGTGCATTCCGGTGAAGATGGTAGCACAGGGCATGGTAGGAAACCGTATTCTCCTGCAGCATTTGTGTCAGCGTCGCCGCTGGTTGGCCTCCCGGAGTTCTCTCATCTCGGCTGGGGCCATTGGTTTACTTTGCGTGACCTTGAGCTTGCTACCAACCGTTTCTCTAGGGAGAATGTGCTTGGAGAGGGAACACCTGCTTCCATTCACTATGGAACAGGATCTATTCATGGTTATTACAGTCAAGATCAAGTTACCATTGGTGATCTAGTTGTCAATAATCAGGAATTCATTGAAGCTACTCATGAGCCTGGTCTTACGTTTCTAGCAGCAAAATTTGATGGCATCCTTGGACTTGGATTTAAGGAAATTTCAGTTGAAGGTGCAGACCCAGTCTGGTATGATAATTTCAACTATGATATTACTGTAGTTTTTCAGGATGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MGSSDLSSEMRRTVLGLTLWVWIAIGVVALLVAILLMICIWMASRRKTKRTMDNLRQTQIPIFSKEIPVDRVGGRSLAQTMHEREQPSFPPQDKHTNREPGKTLGHMALSKSSEPDNMSQGSSVCNVDRAGSVHSGEDGSTGHGRKPYSPAAFVSASPLVGLPEFSHLGWGHWFTLRDLELATNRFSRENVLGEGTPASIHYGTGSIHGYYSQDQVTIGDLVVNNQEFIEATHEPGLTFLAAKFDGILGLGFKEISVEGADPVWYDNFNYDITVVFQDV</aaseq>

Gene Sequence

<dnaseqindica>1..583#2113..2207#2300..2461#ATGGGTTCCAGTGATTTGAGTTCAGAGATGAGGAGGACGGTTCTTGGCCTAACATTGTGGGTCTGGATTGCAATTGGTGTGGTCGCTCTTCTAGTTGCCATTCTGCTGATGATATGCATTTGGATGGCATCCCGCCGCAAGACGAAGAGAACAATGGACAATTTGAGGCAAACACAGATCCCCATTTTCTCCAAGGAGATCCCGGTTGACAGGGTTGGCGGCCGCAGCCTTGCGCAGACAATGCATGAACGTGAGCAGCCTAGCTTCCCACCGCAAGACAAGCACACAAACCGGGAGCCGGGGAAGACGCTGGGGCATATGGCACTGAGCAAGTCATCGGAACCTGACAACATGAGCCAGGGGAGCTCAGTTTGCAATGTTGACCGTGCTGGTAGTGTGCATTCCGGTGAAGATGGTAGCACAGGGCATGGTAGGAAACCGTATTCTCCTGCAGCATTTGTGTCAGCGTCGCCGCTGGTTGGCCTCCCGGAGTTCTCTCATCTCGGCTGGGGCCATTGGTTTACTTTGCGTGACCTTGAGCTTGCTACCAACCGTTTCTCTAGGGAGAATGTGCTTGGAGAGGGTGGATATGGAGTTGTGTATCGTGCCGTCTAGTGAATGGAACTGAAGTTGCTATCAAAAAGATCTTGAACAATATGTAAGCTCACAATTGGCTGCTAGCTATTGCTCTGATCTCTGTTTCTAACAATCTTACTCATTTACTTAATTACATTGCATGATGGGTTTGCAGGGGGCAGGCAGAAAAGGAGTTCAGAGTGGAGGTAGAGGCTATTGGCCATGTCCGGCATAAGAATTTGGTTCGGCTGTTGGGTTACTGTGTTGAGGGAGTGAATAGGTAAGTGAAGTGCCAGACATGATACACTTGCTCTGTTGTTTCTTTTCAGAAATGTCAGTTAGTAACAAAATTGTCTGTTTCTTTTGTTATTTATATATGTACTTGTAATGCTAGGCTAACCTGATTTTGCCTAAGTTTGTATGGACTATCGGAATGATTCTTAATAGATCAACTAAAGGAACTGCGCCTCTCACTTTGTCCTTTCAGATGTACAGATGAAAAAAATAAGGTCATGCTTTTTAGTAAACTAGCAAATTCCCTTTTATACTGTTTTTTAGATTGTACAAACTACATTCTACTATGTCCACATAGCTCTCCTGAAGACATGAAGTGAGAGTTGTCCTGCCGTATCTCCTAAGCTTTTCAGTTGTATCTTCAACCTTCCTTAGACTGCTCCTGCATTTGGCCCAATTAATTTTTCATGTATCCTATACAGATGATAATTGCCTACAGGGCTCCCTCATCCTCGCAAATCCAACATGTAATGCGGACACATGCTTCAAAGCACATCTATGGCACATAAAACATGTACTCCCTCCGTGTGAAAATATAGGGTGTATTTTGTTTCGTTAGGACAAGGTTTTGACCGAAGATTACTCTATTATGATATAATTTTTAGGACGCAAAGTTAAATTTATTAGATTCATATTCAAAAGTACTTGCTTATGATTATACTTTTGTATCACATAAATCATATTATAATATTGCAACAAAGTTTTGTCCTAACAAAACAAAATACGCCCTATATTTTGGAATAGAGGGAGTGCAATATTATTAGCCTTTTGCGTCAAAAAAAATATTATTAGCCTGCCAGCTCTGGTGCTGCAAAAAGAATAAACGGTGAGGTAATAGAGGGTTGAGTTGAGTTGGGCAAAGCCTGACAGTAATTCCCATAAAAAATAGAGGGTTGAGTTAGCCTTTGATTAATACTTCTACTCCATGCCCATATATTTTACAGTGATTATGATGTCAACAGAAAATGATGAACTATGAATTGCATTGGAGCATCNNATGAATTCTTTGTGTTGAGGCAGAATGCTATATTAGGTACCATTTTTCCATGACAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCGTGTTATACATTTTTTTTTCTGATAGTACTTGCCAAAGAATACATATTTTTTATTATTATTATACATAGTGCTTCTAATAGGACTAATACTTCGTGATGATCTCACCTCTCCATTTCCATGTGTTATTCAGGAACACCTGCTTCCATTCACTATGGAACAGGATCTATTCATGGTTATTACAGTCAAGATCAAGTTACCATTGGTGATCTAGTTGTCAATAATCAGGTTCTTTTATCATTTTCGAAATTATATGCTTAATCTGACAGAACACTATGAACTGTCAATGCTCATGTTACTGAACTGAATTATGTTCCCAGGAATTCATTGAAGCTACTCATGAGCCTGGTCTTACGTTTCTAGCAGCAAAATTTGATGGCATCCTTGGACTTGGATTTAAGGAAATTTCAGTTGAAGGTGCAGACCCAGTCTGGTATGATAATTTCAACTATGATATTACTGTAGTTTTTCAGGATGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004047