BGIOSGA004048

From RiceWiki
Revision as of 11:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004048| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004048, complete gene.| tag = OS01G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004048

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004048, complete gene.

LocusTag

OS01G0631700

Ensembl Transcript ID

BGIOSGA004048-TA

Ensembl Protein ID

BGIOSGA004048-PA

Length

3370

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28404317..28407686

Sequence Coding Region

28404317..28404975,28405069..28405173,28406420..28406542,28406638..28406808,28406911..28407040
,28407268..28407477,28407555..28407686

Genome Context

<gbrowseImage1> name=IndicaChromosome01:28404317..28407686 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:28404317..28407686 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTCCAGTGATTTGAGTTCAGAGATGAGGAGGACGGTTCTTGGCCTAACATTGTGGGTCTGGATTGCAATTGGTGTGGTCGCTCTTCTAGTTGCCATTCTGCTGATGATATGCATTTGGATGGCATCCCGCCGCAAGACGAAGAGAACAATGGACAATTTGAGGCAAACACAGATCCCCATTTTCTCCAAGGAGATCCCGGTTGACAGGGTTGGCGGCCGCAGCCTTGCGCAGACAATGCATGAACGTGAGCAGCCTAGCTTCCCACCGCAAGACAAGCACACAAACCGGGAGCCGGGGAAGACGCTGGGGCATATGGCACTGAGCAAGTCATCGGAACCTGACAACATGAGCCAGGGGAGCTCAGTTTGCAATGTTGACCGTGCTGGTAGTGTGCATTCCGGTGAAGATGGTAGCACAGGGCATGGTAGGAAACCGTATTCTCCTGCAGCATTTGTGTCAGCGTCGCCGCTGGTTGGCCTCCCGGAGTTCTCTCATCTCGGCTGGGGCCATTGGTTTACTTTGCGTGACCTTGAGCTTGCTACCAACCGTTTCTCTAGGGAGAATGTGCTTGGAGAGGGTGGATATGGAGTTGTGTATCGTGGCCGTCTAGTGAATGGAACTGAAGTTGCTATCAAAAAGATCTTTAACAATATGGGGCAGGCAGAAAAGGAGTTCAGAGTGGAGGTAGAGGCTATTGGCCATGTCCGGCATAAGAATTTGGTTCGGCTGTTGGGTTACTGTGTTGAGGGAGTGAATAGGATGTTGGTGTATGAATTTGTGAATAACGGTAATTTGGAGCAGTGGCTTCATGGAGCTATGCGCCAGCATGGTGTTTTTAGCTGGGAAAATCGTATGAAGGTTGTTATCGGCACTGCAAAAGCACTAGCTTACCTTCATGAAGCTATAGAACCAAAAGTTGTGCACCGAGATATAAAATCAAGCAATATCTTGATTGATGAGGAATTTAATGGCAAGGTCTCTGACTTTGGATTGGCCAAGCTTTTGGGGTCTGATAAAAGCCACATTACTACTAGAGTGATGGGAACATTTGGATATGTTGCACCTGAGTATGCTAACACGGGCATGTTGAATGAAAAGAGCGATGTTTATAGTTTTGGTGTTCTCTTGTTGGAAACTGTGACAGGAAGGGAACCTGTTGATTACAGCCGCTCTGGCAATGAGGTCAATCTTGTCGAGTGGCTCAAAATAATGGTGGCAAACCGGAGAGCAGAAGAAGTGGTTGATCCAATCCTAGAGGTTAGACCAACTGTTAGAGCTATTAAGCGGGCTCTTTTGGTTGCGTTACGGTGTGTTGATCCTGACTCTGAAAAGAGACCTAAGATGGGCCAAGTTGTTAGGATGCTTGAGTCTGAAGAAGTTCCATACCGGGAGGATCGGAGGAATCGAAGGAGTCGCACAGGAAGCATGGATATCGAGTCGATTGCAGAGGGCTCAAATTCAACCGAATTTGCAAACAAGGTAGAAAGAACTGGAAGCTCGACATCAGACAGGTCTCAGTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MGSSDLSSEMRRTVLGLTLWVWIAIGVVALLVAILLMICIWMASRRKTKRTMDNLRQTQIPIFSKEIPVDRVGGRSLAQTMHEREQPSFPPQDKHTNREPGKTLGHMALSKSSEPDNMSQGSSVCNVDRAGSVHSGEDGSTGHGRKPYSPAAFVSASPLVGLPEFSHLGWGHWFTLRDLELATNRFSRENVLGEGGYGVVYRGRLVNGTEVAIKKIFNNMGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVNRMLVYEFVNNGNLEQWLHGAMRQHGVFSWENRMKVVIGTAKALAYLHEAIEPKVVHRDIKSSNILIDEEFNGKVSDFGLAKLLGSDKSHITTRVMGTFGYVAPEYANTGMLNEKSDVYSFGVLLLETVTGREPVDYSRSGNEVNLVEWLKIMVANRRAEEVVDPILEVRPTVRAIKRALLVALRCVDPDSEKRPKMGQVVRMLESEEVPYREDRRNRRSRTGSMDIESIAEGSNSTEFANKVERTGSSTSDRSQS</aaseq>

Gene Sequence

<dnaseqindica>1..659#753..857#2104..2226#2322..2492#2595..2724#2952..3161#3239..3370#ATGGGTTCCAGTGATTTGAGTTCAGAGATGAGGAGGACGGTTCTTGGCCTAACATTGTGGGTCTGGATTGCAATTGGTGTGGTCGCTCTTCTAGTTGCCATTCTGCTGATGATATGCATTTGGATGGCATCCCGCCGCAAGACGAAGAGAACAATGGACAATTTGAGGCAAACACAGATCCCCATTTTCTCCAAGGAGATCCCGGTTGACAGGGTTGGCGGCCGCAGCCTTGCGCAGACAATGCATGAACGTGAGCAGCCTAGCTTCCCACCGCAAGACAAGCACACAAACCGGGAGCCGGGGAAGACGCTGGGGCATATGGCACTGAGCAAGTCATCGGAACCTGACAACATGAGCCAGGGGAGCTCAGTTTGCAATGTTGACCGTGCTGGTAGTGTGCATTCCGGTGAAGATGGTAGCACAGGGCATGGTAGGAAACCGTATTCTCCTGCAGCATTTGTGTCAGCGTCGCCGCTGGTTGGCCTCCCGGAGTTCTCTCATCTCGGCTGGGGCCATTGGTTTACTTTGCGTGACCTTGAGCTTGCTACCAACCGTTTCTCTAGGGAGAATGTGCTTGGAGAGGGTGGATATGGAGTTGTGTATCGTGGCCGTCTAGTGAATGGAACTGAAGTTGCTATCAAAAAGATCTTTAACAATATGTAAGCTCACAATTGGCTGCTAGCTATTGCTCTGATCTCTGTTTCTAACAATCTTACTCATTTACTTAATTACATTGCATGATGGGTTTGCAGGGGGCAGGCAGAAAAGGAGTTCAGAGTGGAGGTAGAGGCTATTGGCCATGTCCGGCATAAGAATTTGGTTCGGCTGTTGGGTTACTGTGTTGAGGGAGTGAATAGGTAAGTGAAGTGCCAGACATGATACACTTGCTCTGTTGTTTCTTTTCAGAAATGTCAGTTAGTAACAAAATTGTCTGTTTCTTTTTTTATTTATATATGTACTTGTAATGCTAGGCTAACCTGATTTTGCCTAAGTTTGTATGGACTATCGGAATGATTCTTAATAGATCAACTAAAGGAACTGCGGCCTTAATTTTGTCCTTTCAGATGTACAGATGAAAAAAATAAGGTCATGCTTTTTAGTAAACTAGCAAATTCCCTTTTATACTGTTTTTTAGATTGTACAAACTACATTCTACTATGTCCACATAGCTCTCCTGAAGACATGAAGTGAGAGTTGTCCTGCCGTATCTCCTAAGCTTTTCAGTTGTATCTTCAACCTTCCTTAGACTGCTCCTGCATTTGGCCCAATTAATTTTTCATGTATCCTATACAGATGATAATTGCCTACAGGGCTCCCTCATCCTCGCAAATCCAACATGTAATGCGGACACATGCTTCAAAGCACATCTATGGCACATAAAACATGTACTCCCTCCGTGTGAAAATATAGGGTGTATTTTGTTTCGTTAGGACAAGGTTTTGACCGAAGATTACTCTATTATGATATAATTTTTAGGACGCAAAGTTAAATTTATTAGATTCATATTCAAAAGTACTTGCTTATGATTATACTTTTGTATCACATAAATCATATTATAATATTGCAACAAAGTTTTGTCCTAACAAAACAAAATACGCCCTATATTTTGGAATAGAGGGAGTGCAATATTATTAGCCTTTTGCGTCAAAAAAAATATTATTAGCCTGCCAGCTCTGGTGCTGCAAAAAGAATAAACGGTGAGGTAATAGAGGGTTGAGTTGAGTTGGGCAAAGCCTGACAGTAATTCCCATAAAAAATAGAGGGTTGAGTTAGCCTTTGATTAATACTTCTACTCCATGCCCATATATTTTACAGTGATTATGATGTCAACAGAAAATGATGAACTATGAATTGCATTGGAGCATCATGAATTCTTTGTGTTGAGGCAGAATGCTATATTAGGTACCATTTTTCCATGACAAATATGTACACCTCCACAGATTAGCAAGAGTTGATTCTTCTCTTTATGAAATCCGTAACCCTTGGTCTTTTAAGGAAGAGCTAAACAAATTTGCATCACCTGTTTAGAAATTTGTGGTTGCATCTTAGGCTCTAGGATATATTGTATATCACAGAAATAATATGACAATGGTTTTTTAATAGGATGTTGGTGTATGAATTTGTGAATAACGGTAATTTGGAGCAGTGGCTTCATGGAGCTATGCGCCAGCATGGTGTTTTTAGCTGGGAAAATCGTATGAAGGTTGTTATCGGCACTGCAAAAGCGTAAGTTTCATCAGCTTCTCAGTCTATAAGATACATGTTGTTTCTGTTGTCGGAATTTGTTTGATGATATTTTGGCGGGTTAATCATGATCACAGACTAGCTTACCTTCATGAAGCTATAGAACCAAAAGTTGTGCACCGAGATATAAAATCAAGCAATATCTTGATTGATGAGGAATTTAATGGCAAGGTCTCTGACTTTGGATTGGCCAAGCTTTTGGGGTCTGATAAAAGCCACATTACTACTAGAGTGATGGGAACATTTGGGTATTTTCCTCTGCTAGCTACCCATTATTTGTACTCATTTGCATCCTTTGTTTGCCATATTTCAAGGAGTACAATAATTCTCATCCATTCTTCTTGATTTAGATATGTTGCACCTGAGTATGCTAACACGGGCATGTTGAATGAAAAGAGCGATGTTTATAGTTTTGGTGTTCTCTTGTTGGAAACTGTGACAGGAAGGGAACCTGTTGATTACAGCCGCTCTGGCAATGAGGTACATAATATTACTTTGATCCATGTTTTGTAATCGTTTGGTTCCTGTTATAATATCAGTATCTTTTTAGTACTGTTGCTGATTTTTTATGCATTTAAACATGATAGTTTAGTATTGTGCCCTTTGGTAAGTTTGTATTGACAACTTCTTATGAACATTATGCTTCTGCACTGCTGTTAGTCAAAAAAGACATTTTTATTCAGATGAAAACCAATTTCTTTCTTTAGGTCAATCTTGTCGAGTGGCTCAAAATAATGGTGGCAAACCGGAGAGCAGAAGAAGTGGTTGATCCAATCCTAGAGGTTAGACCAACTGTTAGAGCTATTAAGCGGGCTCTTTTGGTTGCGTTACGGTGTGTTGATCCTGACTCTGAAAAGAGACCTAAGATGGGCCAAGTTGTTAGGATGCTTGAGTCTGAAGAAGTTCCATACCGGGAGGTAATGATTGAAAAACCAAACTTGTTGTATACTGTAAGTAATAAAATTCTTGCTTAACATATCTTCATGTGCAAAAGGATCGGAGGAATCGAAGGAGTCGCACAGGAAGCATGGATATCGAGTCGATTGCAGAGGGCTCAAATTCAACCGAATTTGCAAACAAGGTAGAAAGAACTGGAAGCTCGACATCAGACAGGTCTCAGTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004048