Os11g0507400

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Revision as of 09:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0507400| Description = Conserved hypothetical protein| Version = NM_001074485.1 GI:115485618 GeneID:4350570| Length = 6214 bp| Definition ...")
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Gene Name

Os11g0507400

Description

Conserved hypothetical protein

Version

NM_001074485.1 GI:115485618 GeneID:4350570

Length

6214 bp

Definition

Oryza sativa Japonica Group Os11g0507400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19933439..19939652

Sequence Coding Region

19933812..19934173,19934270..19934438,19935372..19935437,19935584..19935731,19936385..19936627
,19937949..19938148,19938443..19938606,19939255..19939612

Expression

GEO Profiles:Os11g0507400

Genome Context

<gbrowseImage1> name=NC_008404:19933439..19939652 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19933439..19939652 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcgatggcggcggggccgctcgctccggccgctcctccggcgaggcctcctcgtggccgccgtctgcgccgcctcgctactcctcctcgtcgtcctccacctccacggccctgagctcccctcgtcttcgaccgcccgagcctccccattccggggcgagctctccgaggcgcgggactcggatgacggggaggcggcggcggcggcggtggaggctggagggggcgcctccaccaccggggccgcgtgcgcgacggtggagaggatgggggaggaggccgcggggcggggctcccccgaggcggccagcctccgcgtccgcgagctcatccgccgccacttcctcctccacggagcttcaagagttagagagcttcctgcatatgagttctgcaaacaagggtttgtgttggggaaagcctctgaagctgggtttggtaatgaaatgtacaagatattaacagcagcagcattgagtgttatgttaaaccggtctctcatcatcgggcaaaccagggggttatatccttttggagagtacatttcttacaccaatcattcattcactattggagaagtaaagcatttatggaggaaaaatcgctgtgctagaacatatggtagaaatctgagtatgagagtcgacaattttgaacacccaacagagactaatgtactttgcagtgactggaatagctggaaagatccaatcatctggtttgatggtacaacagatgcagttgggatccaattctttctgaagaatgttcatgctagaatgaaaacagctgcttcgtcactctttggatcccctggctcattacgtgcgagacctaatacatttggtgaacttatgcaagttataatatctccttcacagacagttgaaaaggcagttcaatgggctttaaagggttccagtcctgatattgtattgcacatgcgcatgatgacaaacaggccagttcgagcaagaaaagctgcagttaattgtattaagagagctatagagatttgtcatttgaagggtacacctcgggtagcagtaatttcagatacaccaggctttgccaaggatataaagcaagacatcagtgagtttgctgaggtgatttattttgatcacaaaaagttctccaggagttttgatctagagataactggaagtgaaaaggctttggatttccgttcaagagactggggttcagctccaaggtgggcagcatttgttgatttctttctggcttcccaagccagatatgcagtggtcactggagcacaccgacgtgtagggacaacctatgcacaactcattgcagcattggctgcagctaacagatttggtcgtgagtcttcaggcacaaacttcacattcttaagcagtgtccacagcaacctactggttgacggcctctcgtcacagggtggctggggccatatctggaacagatatgctggccctttgagctgccaacatcaacagcaccaatgtgccttgaccccactcctggcacctgcttggtgggacggccaatggcaaagccccattcctagagatgtgaggagattgctggaatatggagtccggttatcaaacacaggagaggtggatgagagacacctcatgtcatactgtaggtcaaggaaagatcatgtgaaaaggtaccgtgttcttccttcatacaatagttcaatgcaactgtag</cdnaseq>

Protein Sequence

<aaseq>MPRWRRGRSLRPLLRRGLLVAAVCAASLLLLVVLHLHGPELPSS STARASPFRGELSEARDSDDGEAAAAAVEAGGGASTTGAACATVERMGEEAAGRGSPE AASLRVRELIRRHFLLHGASRVRELPAYEFCKQGFVLGKASEAGFGNEMYKILTAAAL SVMLNRSLIIGQTRGLYPFGEYISYTNHSFTIGEVKHLWRKNRCARTYGRNLSMRVDN FEHPTETNVLCSDWNSWKDPIIWFDGTTDAVGIQFFLKNVHARMKTAASSLFGSPGSL RARPNTFGELMQVIISPSQTVEKAVQWALKGSSPDIVLHMRMMTNRPVRARKAAVNCI KRAIEICHLKGTPRVAVISDTPGFAKDIKQDISEFAEVIYFDHKKFSRSFDLEITGSE KALDFRSRDWGSAPRWAAFVDFFLASQARYAVVTGAHRRVGTTYAQLIAALAAANRFG RESSGTNFTFLSSVHSNLLVDGLSSQGGWGHIWNRYAGPLSCQHQQHQCALTPLLAPA WWDGQWQSPIPRDVRRLLEYGVRLSNTGEVDERHLMSYCRSRKDHVKRYRVLPSYNSS MQL</aaseq>

Gene Sequence

<dnaseqindica>5480..5841#5215..5383#4216..4281#3922..4069#3026..3268#1505..1704#1047..1210#41..398#acagtggcagtcgcagacattcctcgcgtcaccaccctcgatgccgcgatggcggcggggccgctcgctccggccgctcctccggcgaggcctcctcgtggccgccgtctgcgccgcctcgctactcctcctcgtcgtcctccacctccacggccctgagctcccctcgtcttcgaccgcccgagcctccccattccggggcgagctctccgaggcgcgggactcggatgacggggaggcggcggcggcggcggtggaggctggagggggcgcctccaccaccggggccgcgtgcgcgacggtggagaggatgggggaggaggccgcggggcggggctcccccgaggcggccagcctccgcgtccgcgagctcatccgccgccacttcctcctccacggtgcgtgtgctcctcgctgtgatccgtgcgcctcgaagaggagattcgatcccctttgatccttctgccgctcctgtttgtgtccctgacatgtgggcccgggcccacctgtcatggactcagtgggtggccgatgatctcttcttcctctttggtgatgatgaaatgtttgcgtggcctcgtagtgtgtagttccatgaatcatcaatggttgttattttgatgtggattgccgtgtccaacttgttgggtagaagaagagctaagaacttttggtttcatcactgctcaattcgaaacattgcggttaagctactgcagaaatagcaccaagaaggcaagcaagaaccgcagcactgcacaaggtttacttgccaactcactgggagattgtcgtgataggcgaatcgataccgacacacacgtctacaatgcggtctccgctttgaatgcgtagctatttttcaccttttgaccatggctgtttctaaatgatctctgttgttccctgttgtaatttctctgctaccatcataaacaacaagacttggaactgtgatcttgtctagagtcttcggctagccaattttgagttcctaggtcgattttgaggacacccaatatttacttgtatcaatttgtcatcaggagcttcaagagttagagagcttcctgcatatgagttctgcaaacaagggtttgtgttggggaaagcctctgaagctgggtttggtaatgaaatgtacaagatattaacagcagcagcattgagtgttatgttaaaccggtctctcatcatcgggcaaaccaggcatgtgcatttactctcaattatttatcttccttatctatcgggtttgaatacgttggacctatattttgactttcctgtgatgattatatatgagatattactgtaatacatatcaaatttaattttctagttggtcactccatctatacatgtgataaagtaggcacaatatcaatccatcttgaatctgtaaaatattgttatggcaacaattagaaatttagagtattgatgattgatattcactaccatcttaccttttgtttgttcctttatcggtttatccaacagggggttatatccttttggagagtacatttcttacaccaatcattcattcactattggagaagtaaagcatttatggaggaaaaatcgctgtgctagaacatatggtagaaatctgagtatgagagtcgacaattttgaacacccaacagagactaatgtactttgcagtgactggaatagctggaaagatccaatcatctggttagtactatagtctaagagttacaatctagtaaagtcacattttcaacagttagttttcttgacataacattgatatgttcatgatgtgtctgcatttgtccctttcagatatgactaaatgacatgccctgtcaattttttttgtgcaaatcatgataagtaatatatttagctagacttaaaggtcttgattatcccccatattaatgtagatactatttcactttttgtattatttcaccatgtgcttatatgcccttgactgagattgcattctatgtctggcacattgcatgcacttatgtttgtttttatccacatcaagattcttttgtaagaacaaaatgaagaaaatgatattctgtagaatatctgaagtctgaactctgaatatattaaatacccagatattcatttccaaccaagttattgaagttgattattctcaccttttgtatatggacaccacagcgcactagatacttcggatgaatcttgtttcttttcattagacacatcatttgcaggccttatagacatatggagttaccaaagttagtgatttccatttttttggcaacaatgtaatactgttttgtatacaaatactgttctagttttaaataactatagctcatattcagtatgcagtaactcacacgtgcaagcatgaccttttgcaaatgttttgtaaacagatactttggaagcactatgcatgcacgctgtgggttcttactggcctactgctactgtgctaccccatattatgttttaatttctttttccactttctacataaaaagtcagatactggagcgtaaccatgctataagcaaacttactatcttgaaataaaaataaaaggactgtataaaaacatgatgtacttatctgtctgcaatctcctgttaaaatattgccatctacaagtcatctttgcaattctttttgatataagaaaacaagtgagctgtataaatatagaaagattgaggatccatattaaaaccaaatgtaacgattgatgttccaaaccatccatgtttcgagaaggaaataacagccaagtactaattggaagaaataaatgatgcttgaccattactactagtacatctgacataaacagcctcctaaaacccctgaacttttttattaattagctgtgggataaaaagtcatgcacttgaattgttttctggttatgttagctgggaatttcttcacatctttgtcttaacagttaatttccttaccaaaactaaatgtaaaaaccaacgcatgctgacatagttttacttgttaatgatgctaggtttgatggtacaacagatgcagttgggatccaattctttctgaagaatgttcatgctagaatgaaaacagctgcttcgtcactctttggatcccctggctcattacgtgcgagacctaatacatttggtgaacttatgcaagttataatatctccttcacagacagttgaaaaggcagttcaatgggctttaaagggttccagtcctgatattgtattgcacatgcgcatgatgacaaacaggtatgaagcactatctgtggcataaaggaaggaaatagatgtaaatttccacattcatttgaaaacataataggatattgtcaaatttgacgttgtaaacttcacgtcaaaaaataactggttcatcagttagccttgaaatatgctgcttccacctgtagatgtgaacagaaactcttggtgcagttgtcaactgaaacataaggatctgtttgacattgcatttgtttgtaaaagcaattaaattccattttgatacagtaattactagttagctgaaagcatatgttacatcataacgtcaaaatcccacttgaatcagtaaagatttgtatgattaatagatagtgtgattcattatagttcagcaaactggcctgtcaacctcttatttttttcgtttctttcctgttgtctaattaataattttttaacatttctcttctatatgtttacaagcaggattgattataaatgtttcagaaatttcaataaactaatgcaaatggtaatgtctgatttgacgttttttgcaccttatcgatatgagaacctccaccacctacaaattacgattatgcagatcaaatttattagcgacctttccacgtcatctgggttgaactgctgaacataactcattttttgactaggccagttcgagcaagaaaagctgcagttaattgtattaagagagctatagagatttgtcatttgaagggtacacctcgggtagcagtaatttcagatacaccaggctttgccaaggatataaagcaagacatcagtgagtttgctgaggttagttactttgtcgaatgttatctcaaggacttcatagttttattcaaatgtaatgggttatgattagatagttttcgtagttaattagcttggaatttctaaaaggaaggggaattgatgattatgatctactttttaagcaggtgatttattttgatcacaaaaagttctccaggagttttgatctagagataactggaagtgaaaaggtacaatatactctcttgaaagatccatcactatgtttgccacagtttctcagtgctgtttactgaaaatgtgagaagtatcttcccgggtgttagatctattatatactaaaagtccattaaacttcctacaaacgctcctgagccgccatgtggcgcttctataaacactcccaaaccgccatgtggcactgtttaatctcaccattgattttcacttaaattggtggactcattaatttaaaccattagatcagatctatgtgtatcgttgattttcatttaaatttgtggacccattatcttagataatctgccacaataaaaagaactgaagaaaaagacaagtctcccgtgtatgtacaactattcaccggagaaaaacatgtacgttctattaccgggaaaataaattaccgtgtacgtacgtatactgcttaacaaaaaaggaataagagcataatgtacttacgattgggaagatatatgtttccaagtacatatatgaacctactatataaaagaaaaggaggtatctgaatttctatattaaaaaatattacgagtacatcacatattagctatattttaattaaaaaattatcacataaaatcatatttagctctttgtgtcttactcatctaaatagacttaataattactctctttgttttctttaaggaatactaaggctttgtttgatctaactaattaagtgacctaatcaggacacgaaatgatacatatcattatcacgtgattaattgagtattaaatattgcaaaaataaaaacgatgggagtggttctacaattttgttaacataattcagcctatcttattttaaatatttttcaatagagatctctgcaagttgctattacacttgtaagaaccaatttcctgcccaaattaagttccttcctctgcaggctttggatttccgttcaagagactggggttcagctccaaggtgggcagcatttgttgatttctttctggcttcccaagccagatatgcagtggtcactggagcacaccgacgtgtagggacaacctatgcacaactcattgcagcattggctgcagctaacagatttggtgcatatccctttctttcatacccgttctattttgtttggaacaattcagtatgaagaccgaattctaaataactgtgcaattgtcttgtatcaggtcgtgagtcttcaggcacaaacttcacattcttaagcagtgtccacagcaacctactggttgacggcctctcgtcacagggtggctggggccatatctggaacagatatgctggccctttgagctgccaacatcaacagcaccaatgtgccttgaccccactcctggcacctgcttggtgggacggccaatggcaaagccccattcctagagatgtgaggagattgctggaatatggagtccggttatcaaacacaggagaggtggatgagagacacctcatgtcatactgtaggtcaaggaaagatcatgtgaaaaggtaccgtgttcttccttcatacaatagttcaatgcaactgtagaatgcgaatgaggctcgtcaagtcatgctcttttggagagcgcagttttgcactaccacttacctaaggagctagtataggttaggatggttaggctttttgaaatggccatgacgctaattttgtaaggtggttccaattttggtgggctgtatcatgtatacctggaactgtcatgtaggaaagctatagaaaataggctagacgtcgtttcaaggcatgccttgtttcgaatcttgttgttattgttatacatcgctgttgttgctaatagtgcaaccagaatgtagtgaagatagtaaaatcaagagacgtgaaactgatgtactgatgcataattaccatgtgaaatcctttattgggtattatactc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0507400, RefSeq:Os11g0507400