Os09g0338400

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0338400| Description = Similar to Cysteine desulfurase, mitochondrial precursor (EC 2.8.1.7) (m-Nfs1)| Version = NM_001069449.1 GI:115478640...")
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Gene Name

Os09g0338400

Description

Similar to Cysteine desulfurase, mitochondrial precursor (EC 2.8.1.7) (m-Nfs1)

Version

NM_001069449.1 GI:115478640 GeneID:4346775

Length

4392 bp

Definition

Oryza sativa Japonica Group Os09g0338400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10894519..10898910

Sequence Coding Region

10894625..10896001

Expression

GEO Profiles:Os09g0338400

Genome Context

<gbrowseImage1> name=NC_008402:10894519..10898910 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10894519..10898910 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctctcccgccgcctcctcccgctcctcctccgccgcgggtccaccccctccctctcccccgcccgcgcgctctccacggccgccgtgacggccgatgctcccgccgcggcggcggcggcggcggaggaggaggcgatgaccatcaagggcgtgcgcatctcggggcggccgctgtacatggacatgcaggcgaccacccccgtcgacccgcgggtgctcgacgccatgctccccttctacctctcccgctacgggaacccccactcccgcacccacctctacggctgggagtccgacgccgccgtcgaggaggcccgcgcccgcgtcgcctccctcgtcggcgccgaccccagggagatcttcttcacctccggcgccaccgagtgcaacaacatcgccgtcaagggcgtcatgcgcttctaccgcgaccgccgccgccacgtcgtcaccacgcagaccgagcacaagtgcgtcctcgactcctgcaggtacctccagcaggaaggcttcgaggtcacctacctccccgtgcgccccgacggcctcgtcgacgtcgcgcagctcgccgacgccatccgccccgacaccggcctcgtctccgtcatggccgtcaacaacgagatcggcgtcgtgcagccactcgaggagattggtcgaatctgcaaggagaagggcgtgcccttccatactgatgctgcccaggcgctcgggaagatcccgattgatgtcaaccaaatggggattgggctcatgtctttgtctgcgcacaagatttatgggccaaagggcgtgggtgctctctatctgcgtcgtcgaccccgcattcgtgtggagccgcagatgagtggcggtggccaggaacgcggaattcgcagtggaacagtgccaacgcctcttgttgttggatttggtgctgcctgcgaaattgcggctaaagagatggactatgatcacaggagagcctcggttctgcagcagcgccttcttgatggcatccgtggacaggttgatgatattgttatcaatggaagcatggagcatcggtaccctggtaacctgaatttgtcatttgcatatgttgagggggagagcttgctgatgggcctgaaggaggtggctgtgtcgagtggcagtgcctgcactagtgccagcttggagccctcttatgtgctgcgggcacttggtgtagaagaggacatggcgcacacctccattcgctttggcattggccgctttaccactgaggaagaggttgacagagcaattgagctcaccgtgcatcaggtgaagaagcttcgtgacatgagtccactgtatgagatggccaaggcaggcattgacctcaagagtatccagtgggcgcagcactga</cdnaseq>

Protein Sequence

<aaseq>MALSRRLLPLLLRRGSTPSLSPARALSTAAVTADAPAAAAAAAE EEAMTIKGVRISGRPLYMDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLYGWESDA AVEEARARVASLVGADPREIFFTSGATECNNIAVKGVMRFYRDRRRHVVTTQTEHKCV LDSCRYLQQEGFEVTYLPVRPDGLVDVAQLADAIRPDTGLVSVMAVNNEIGVVQPLEE IGRICKEKGVPFHTDAAQALGKIPIDVNQMGIGLMSLSAHKIYGPKGVGALYLRRRPR IRVEPQMSGGGQERGIRSGTVPTPLVVGFGAACEIAAKEMDYDHRRASVLQQRLLDGI RGQVDDIVINGSMEHRYPGNLNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYV LRALGVEEDMAHTSIRFGIGRFTTEEEVDRAIELTVHQVKKLRDMSPLYEMAKAGIDL KSIQWAQH</aaseq>

Gene Sequence

<dnaseqindica>107..1483#atctctccttttttttttctccccaaatcacccctccgccgaaacgggagctcgatctccgccgccaccgccaatccccgaaccctacctctccccccctccacccatggcgctctcccgccgcctcctcccgctcctcctccgccgcgggtccaccccctccctctcccccgcccgcgcgctctccacggccgccgtgacggccgatgctcccgccgcggcggcggcggcggcggaggaggaggcgatgaccatcaagggcgtgcgcatctcggggcggccgctgtacatggacatgcaggcgaccacccccgtcgacccgcgggtgctcgacgccatgctccccttctacctctcccgctacgggaacccccactcccgcacccacctctacggctgggagtccgacgccgccgtcgaggaggcccgcgcccgcgtcgcctccctcgtcggcgccgaccccagggagatcttcttcacctccggcgccaccgagtgcaacaacatcgccgtcaagggcgtcatgcgcttctaccgcgaccgccgccgccacgtcgtcaccacgcagaccgagcacaagtgcgtcctcgactcctgcaggtacctccagcaggaaggcttcgaggtcacctacctccccgtgcgccccgacggcctcgtcgacgtcgcgcagctcgccgacgccatccgccccgacaccggcctcgtctccgtcatggccgtcaacaacgagatcggcgtcgtgcagccactcgaggagattggtcgaatctgcaaggagaagggcgtgcccttccatactgatgctgcccaggcgctcgggaagatcccgattgatgtcaaccaaatggggattgggctcatgtctttgtctgcgcacaagatttatgggccaaagggcgtgggtgctctctatctgcgtcgtcgaccccgcattcgtgtggagccgcagatgagtggcggtggccaggaacgcggaattcgcagtggaacagtgccaacgcctcttgttgttggatttggtgctgcctgcgaaattgcggctaaagagatggactatgatcacaggagagcctcggttctgcagcagcgccttcttgatggcatccgtggacaggttgatgatattgttatcaatggaagcatggagcatcggtaccctggtaacctgaatttgtcatttgcatatgttgagggggagagcttgctgatgggcctgaaggaggtggctgtgtcgagtggcagtgcctgcactagtgccagcttggagccctcttatgtgctgcgggcacttggtgtagaagaggacatggcgcacacctccattcgctttggcattggccgctttaccactgaggaagaggttgacagagcaattgagctcaccgtgcatcaggtgaagaagcttcgtgacatgagtccactgtatgagatggccaaggcaggcattgacctcaagagtatccagtgggcgcagcactgagacagctttcacttagagctaatccctggctgcttttgaagtgcacggaaggacacatagataggtacatggctctgctgctttgtgatatatcctgttttatttcataattatttcataagggagatgtggaattgctatggctgctattaagttgcttgagtaaccttgcacccatgaatcttcacattgtgaatttgataggttacctgtggcacgttttgagcatataacaatccacgcaatgttttcccagtgattagttctgagtgtacattcatttactttggagatcttctcactatgccaaaaggaaaggtaaaattcagaacaaagtaacaccactgtgcagagataaatcatttttatcaatgtatcagctgttaaaaaaatggaaaaatgtcttgcttccaagggatcaatacaagaaagtcgccaagtttacctttgttagcaggatttcatcttattgttgtttcacgtctttttgtttgacaattgttccagatgaattgctggaatttcagagcatgcttttcatcctttgacatgccaaagtttcgtggattgtattaccaataattgtcacatggttaaacttggctacatgacaataagtcaatatgactgttgggtgtttgggttgtcattgatgtttctagtcacctatcaaatctcaggctatcagttcttacttgcacaagctaatcaatgagggtccgctactatatctcatttcttaaaatgaaaaacaaactgcagcacaagacaaagttagcgtcccaatgttatgcagcaatgcgtttagagcagtggttataagctctgtcttccataaatttgttgagttttgttggctttgcagttcgctcttcttttcttttctttttttaggtgtgcataaatctacaagactacaactatagagttagttctggctctaggacacatgttccacctagctggactgtaggttccagctcaatattgaatattggtcacaggatttcatttttcttaagtactactgagattttttgtttgtcaatagtttgtcatcacttgctgaaaatttgagagcatgctttatttgcttagactgaatttaaaccttaccaaaagataatatctctaatagtttgtcatcaattgctgaaatttgagagcgtgctttatttgcttggactgcatgtaaaccttaccaaaagacaatatctcgctgttgattggtgctgattgatactgcatggtgaactgataataaattaataatatggaggggctcaagctctcggttccctactgacttaatactttgcaaattttaccatttctatgttggagtaagcaaagtcactttgtcctccatctactactccctgttgtgtctcctgtttgaaattttttaacttcattctcttgctctgtggttttgcttccgaacatctatgactgtattctctaccaagactttctgtgttccatggcaacatttagtttctattttctagtgctattgcgttgcataatagtagttacatagaacttcctaatcttgtttgaaacacttctcaaacagagcagacaggcaaattttgttcataatattgcctttggttttacagtggcaaattttgaattatgtggttgcttgtcttactacatcatgttttgaattcttctcccaatcagtccttttcttgaaacctgtctgtttgttaggccttcctcttctgtgtggctatttttaaatgtcattctccatcagtgttgttcatattatgtatctacctgtcaactgatttttcactgggtttgttgaagtcattcgattttttttgcagtttaattcatgatcttttaaaggcccagataaatatttaagagcaaagtgcacgggcagttcataaacttgtgcgggtgtgtcacctaggtccatgaactctcaaaatgcatttttgggtccctcaacttgtctcgggtgtcatatagatccaaacaggttccaaccctttgtgtgtgttgatgtggcatgccatggtggcgcctacgtgtcagtacaacccatatatcatataaaaaatattaagaacatattttttctcctctcttttttcatttattttcaaaattaaaaacttccttttctcctctctctctctctcctctctttttaaattttattttttttctatgtgactgacatgtgtatctcactgacacgtaagcgtcaccgtggcatgctacatcatcccacgaaacaggttagagctcgtttggacctatatgacacccgagacaagttgagggacccaaaaatacattttgagaatttagggacctaagtgacacacctgcacaagtttagggaccgccggtgcagttcactcaatatttaattcttatttcctgacacgttccttacataggatgctccagaaatcctatttttgttgttcaattctcttaaatgctacagatcatattatatatagtacaaagataatttagttaaccaatcaaaatttactgtaaacaaatttacactagaaaaaacagcgaatggcatatatgatatctaatttggtgtgcgattgaattttttcaggcctgtctggtgttggtgaagacatttctatgaaccatgtgatagttctgtcaagacaatcagctagtattgtacatctgttcacttgccaagttgccagctctcaggctggcaactaatgttttctgctaggttagcaccttgttctctagctagaataccccaacacgaaataagaatgcttgagtggttactgtgttgcctgaaaccctttaagatactaattggagttactggcataatgctgttactatatattttggtgctcacattataatttcaacacaccaggttatctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0338400, RefSeq:Os09g0338400