BGIOSGA004087

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Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004087| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004087, complete gene.| tag = P0039G0...")
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Gene Name

BGIOSGA004087

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004087, complete gene.

LocusTag

P0039G05.15

Ensembl Transcript ID

BGIOSGA004087-TA

Ensembl Protein ID

BGIOSGA004087-PA

Length

3544

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28938794..28942337

Sequence Coding Region

28938794..28939075,28939477..28939601,28939776..28939813,28940001..28940111,28940203..28940282
,28940764..28940818,28941065..28941351,28941687..28941723,28942130..28942171
,28942255..28942337

Genome Context

<gbrowseImage1> name=IndicaChromosome01:28938794..28942337 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:28938794..28942337 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGTGACCACGCGGCTGCCGGCCCCTCCAGGGGGCGGCCTCCAGCGCCGCGCGCCGCGGGGCATCCTCCCGGCCTCGCTCCCCGTGGAGCGCCCGGCGCGGCGCCGCCTCGCGCCCGGCGTCCGCGCCGCCTCCGGGATCCCTGGACCCGGCGGATCGCCCGTCCCTAGGCGGACGACGCCTGCGCCGGCCGACGCGGCCGCCGCGGCGCCGCCCTCCGCCGCGGCGTCGTCTGCCTCCTCGGCCATCGATTTCCTCACCCTCTGCCATCGCCTTAAGACCACTAAAAGGAAAGGCTGGATAAACCATAGCATAAAGGGTCCTGAGTCTATTGCTGATCACATGTACCGTATGGCCCTTATGGCTTTGATTGCCGGTGACCTACCTGCTGTAGATCGAGAAAGATGCATCAAAATTGCTATCGTGCATGACATTGCTGAAGCTATTGTTGGTGACATTACTCCATCCGACGGTATACCTAAAGCGGAAAAAAGCCGCCGTGAACAAAAGGCTCTAAATGAAATGTGTGAAGTTCTCGGTGGAGGACCAATAGCTGATGAGATCAAGGAGCTCTGGGAAGAATATGAAAATAATTCATCCATTGAAGCCAACCTTGTAAAGGATTTTGATAAAAGGGGTGTCATGCAAACCAGGGTTCAATCTATCGGGAAAGGGAAAATTTTCGGAGCCGTGGAGCCGCTGCTGGCCACTCCAGCCAAACACAAGGATGCGAGGTCCACGGCTTGTGTCGCCGTCGAGCCGGAGCCGCGGAGCCGTTGCTGGCACTCCAGCACGAGGATGCGAGGCCCGCGCCGCCTTGCCGCTTGTGTCATCGTCGTCACTCCGGAGAGCCGCGGAACCACCGCTGGCCACTCCAGCCACCCCTCTGCCTCCAGTTCCAGCAACCGCTGCCGGTGTTGCTCGCTAGTGCTGGGAGGATGGGAGGAGATGTTGGGGGAGGACGGGGGGAGAAAGGTGGAAATGATACTTCAAGCACTAGAATATGAGAAAGAGCATGGCAAAGTGTTAGATGAGTTCTTCCTCTCTACCGCTGGCAAGTTCCAGACAGAGATTGGCAAGAGCTGGGCTGCTGAAGTGAATGCGAGGAGAGAACAGAGATGCGGAAAACAGAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MGVTTRLPAPPGGGLQRRAPRGILPASLPVERPARRRLAPGVRAASGIPGPGGSPVPRRTTPAPADAAAAAPPSAAASSASSAIDFLTLCHRLKTTKRKGWINHSIKGPESIADHMYRMALMALIAGDLPAVDRERCIKIAIVHDIAEAIVGDITPSDGIPKAEKSRREQKALNEMCEVLGGGPIADEIKELWEEYENNSSIEANLVKDFDKRGVMQTRVQSIGKGKIFGAVEPLLATPAKHKDARSTACVAVEPEPRSRCWHSSTRMRGPRRLAACVIVVTPESRGTTAGHSSHPSASSSSNRCRCCSLVLGGWEEMLGEDGGRKVEMILQALEYEKEHGKVLDEFFLSTAGKFQTEIGKSWAAEVNARREQRCGKQK</aaseq>

Gene Sequence

<dnaseqindica>1..282#684..808#983..1020#1208..1318#1410..1489#1971..2025#2272..2558#2894..2930#3337..3378#3462..3544#ATGGGCGTGACCACGCGGCTGCCGGCCCCTCCAGGGGGCGGCCTCCAGCGCCGCGCGCCGCGGGGCATCCTCCCGGCCTCGCTCCCCGTGGAGCGCCCGGCGCGGCGCCGCCTCGCGCCCGGCGTCCGCGCCGCCTCCGGGATCCCTGGACCCGGCGGATCGCCCGTCCCTAGGCGGACGACGCCTGCGCCGGCCGACGCGGCCGCCGCGGCGCCGCCCTCCGCCGCGGCGTCGTCTGCCTCCTCGGCCATCGATTTCCTCACCCTCTGCCATCGCCTTAAGGTACGCCAACGGGATGTTCCTCGTGATCCGATCGCCTCTGGATACGTCGCTCCGAAGGCATATGCCTGTCCTTCGCTGACCGCGTGTGTACAACCGGGCTGGTGATACCCCCTTAATTTCTAGAGTAACAGCTTGGGGAATGTGGAACAGCTATGAGGGGTTTCATAATCGCCATTTTGTATTGTGAATTGATTACCATGATTCCATGAAGTCTCGCATCATGGGTACCTTGCTTACGATGTCATAAGTAGGTGGGATGTGTGACCAGCAACAAGCATATGAACAAGCGTCTGGATCCTGTTCAATTGTTCATCTCTCCATGCATGTGTTGCCTAGGTCTATTATACTCGTTATTATTCTGCGATATATTGAGTTGTGCATGTTTCTGTTCTGTTATACAGACCACTAAAAGGAAAGGCTGGATAAACCATAGCATAAAGGGTCCTGAGTCTATTGCTGATCACATGTACCGTATGGCCCTTATGGCTTTGATTGCCGGTGACCTACCTGCTGTAGATCGAGAAAGGTCCGTGTTTTTCTTATTCAAATTTCCATAGCATTAAAAAATGCCCTTTCGTCTGTTCTTTGTTCATCTAGTTAATTGATTACAACAAAATACCAGATGTTTCAGGCTTCCTTTCTAAATTAGTCATTAGTTATTTACTTGTTTGTGATGACATATTTATTTTACCTAAAACAGATGCATCAAAATTGCTATCGTGCATGACATTGCTGAAGGTATGCCAAAGAACACCCTATCAGCTGTTTTTAGCTTAATTTTCTATTGTATGCACTTGTTGATAATATGTTATTGCACTTCATCTGCCAATATTTATCATCCTTATTCTAGGACTGTATAATCTGTATGTTCCCACTTTTCTTAGCATCCTTTTATATTCAGGTTTTTATCCTTTTTGTTTGACAGCTATTGTTGGTGACATTACTCCATCCGACGGTATACCTAAAGCGGAAAAAAGCCGCCGTGAACAAAAGGCTCTAAATGAAATGTGTGAAGTTCTCGGTGGAGGACCAATAGGTTTGTGTCCATTTGGGATGTGACGTCCGAGTTCATGAAGGATGATGTTTGACATCAATCTTCACTACTTTTAGTGTTCTGTTTTTTGTAGCTGATGAGATCAAGGAGCTCTGGGAAGAATATGAAAATAATTCATCCATTGAAGCCAACCTTGTAAAGGATTTTGATAAAGTAAGCGTGCCTTTTATTTTCTGAACTGTCTACTTGTTCCTTTTCTTTTTCTTAGTTCTTAACTTGGTGCCTTTTATAATGTTGATTTTAATTTTCTCAACCTGGAGTCTAATTTGAAATGTACACCAGAATTATCATTTTCGTTAATATACTAGCTTTCTTTTTGTTTGGAATTGGTACAAATTCAGCACAATTCTACAATTTTCAAGCTTGCTAGAGTAACGCTTTATGAAACCATGTCCAAGTTCCTGAAACAACTCACTCATAGATAAATATTTTATATTTAGTTCATATGAACTGGAAAATTCTTGCTTTTCTTCATTAACATAGACAAAATAAACAAGAATATAACATTTGTTTTGATGAATGGTTTCAGTAGTTCATTGAACTTTTTGGGCTTGTGCAAAATGCAAAATATTTTTAATTTCCAATACTTTAACGCATGCATGTTTGCTTGTAAGAATATTCTTTATTACATAAGAGGGGTGTCATGCAAACCAGGGTTCAATCTATCGGGAAAGGGAAAATTTTCGGAGGTCAGCAAAATAACGAAATTTCGGAAATCTTTCGGAAATTTCGAACGAAATTTTCAAACAAAATTTGAATTTGAACAACAAAAATTACAGAAATTTGACATATATCAGAATATAGACATGCATCAAGTCCATCCAATCCAAAGCAGGGGGACAGGATAGGAGAATGAAACGCAAGGATTGTGTCGTCGTGTCCTCTCTGGCTTGTGTGCCTTGTGTCGTTGTCGCGGTCGCGGTCGCGCCCGACAGCCGTGGAGCCGCTGCTGGCCACTCCAGCCAAACACAAGGATGCGAGGTCCACGGCTTGTGTCGCCGTCGAGCCGGAGCCGCGGAGCCGTTGCTGGCACTCCAGCACGAGGATGCGAGGCCCGCGCCGCCTTGCCGCTTGTGTCATCGTCGTCACTCCGGAGAGCCGCGGAACCACCGCTGGCCACTCCAGCCACCCCTCTGCCTCCAGTTCCAGCAACCGCTGCCGGTGTTGCTCGCTAGTGCTGGGAGGATGGGAGGAGATGTTGGGGGAGGACGGGGGGAGAAAGGTGAGTGAGAAGGGGATTGGAAATTGGGGATTTGGACCATGAACAGTGTTTTGCCGAAATTTTTCACCGGAGCTCACTGTCTATTGGGACCCACCTATAGACCTGAAATTTGTTCCGGAATTTTAAACCCTGCATGCAACATATTGTTCATTTTGTATTCTTAACTCTTTAAGGTGTAATATTTATATTGTATTTTGGTGTGTTGTGGCACATATTGGTCATTTGCAGTTTCACTCTGGGGCACATCTCATTTGTCCTTTTCTTTGTTTTCATTCTCTATTTATTCACTATGGTTCAAGGGATTTTACCATTTCTTGTATTTACTTGTTTTGCAGGTGGAAATGATACTTCAAGCACTAGAATATGAGAAAGGTATTACTTTTCTGTAATTTTAAATTTGTGTACATTCAACTAGCTGCTTACTCATTTTAACAAACTGTGAAGTCTACCAGGCGGTAGATTGGGTCCTTCCTCTGAAACAATTTGCTGTTACAGTAATATGCAGGATACATCATGTTTTTTATCGCACCATTCTGATGCGTGCATTGATGCTTGGTTTTACAAAGCAAGAACTTTGAATAGTCTGCTGCCGTGTTGACAATCATACCAAACCGCTTTCTTCATGCCACCATCTTCTTCTTTTGTTTGTTCAGGGCACTGTACAATATAATTCCAGCTGCCTGCCTATGTTGTCATCCTACTCAAGTAGTACATATCTGATGTACATTGTGGATTATAATCCGTTTGTAACACTAACTCTTCCCATCTTATTCTACAGAGCATGGCAAAGTGTTAGATGAGTTCTTCCTCTCTACCGCTGGTAATGTCATTGTTGCAGGCTATTTAAAAATTTGTAAACATGTCCTCTGTTGTTAAACATATCTGTAAATCTTGTTACTGCAGGCAAGTTCCAGACAGAGATTGGCAAGAGCTGGGCTGCTGAAGTGAATGCGAGGAGAGAACAGAGATGCGGAAAACAGAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004087

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004087&oldid=41811"