BGIOSGA004101

From RiceWiki
Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004101| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004101, complete gene.| tag = OS01G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004101

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004101, complete gene.

LocusTag

OS01G0645400

Ensembl Transcript ID

BGIOSGA004101-TA

Ensembl Protein ID

BGIOSGA004101-PA

Length

2028

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29199300..29201327

Sequence Coding Region

29199300..29199929,29200308..29200556,29200815..29200937,29201109..29201327

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29199300..29201327 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29199300..29201327 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAACAAGCCGGCGCAAGAACGCCGCGAGACGTGGGTCCCGGGCGCCGTCATCGTCGGCGCGGGCCCGTCGGGGCTCGCCGCGGCGGCGTGCCTCGCGGCGCGGGGCGTTCCGGCGACGGTGCTTGAGCGGTCCGACTCGCTGGCGTCCACGTGGCGCCACCGCATGTACGACCGCCTCGCTCTCCACCTGCCCAAGCGCTTCTGCGAGCTGCCGCTCCTCCCGTTCCCGGAGGAGTACCCGACGTACCCGTCCAAGGACCAGTTCGTGGCGTACATGGAGGCGTACGCCGCGGCGGCGGGCGTCGCGCCGCGCTTCGGCGCCACCGTCGAGGAGGCCGCGTTCGACGCGGCCGTCGGCGCATGGAGGGTGCGTCTCGACGGCGGGGAGGTGCTCATGGCGCGGTGGCTCGTCGTCGCGACGGGGGAGAACGCCGAGCCGCGGGTGCCGGACTTTCCCGGCATGCAGAAGTTCGCCGGGTGTGCCATGCATACTTCCGAGTACAAGTCCGGCGAGCAGTTTGCCGGTAAGAAGGTGTTGGTCGTGGGATGCGGGAATTCTGGCATGGAAGTGAGCTTGGATTTGTGCCGGCATGGCGCGAAGCCCTCCATGGTGGTGCGCAACACGGTGCATGTCCTACCAAGGGAAATGTTCGGTCTATCCACGTTCGGCATCGCCATGGCGCTGCTCCGATGGCTACCGATTCAGCTCGTCGACCGGTTCCTTCTCACGGCGGCTCACCTCATCCTCGGTAACACGGGGCAGTTCGGCCTAAGGCGGCCCAAAACAGGGCCCATCGAGCTCAAAAACCTCACCGGCAGGACACCCGTACTGGACGTTGGGACGCTAGACCACATCAAATCCGGCAAAATTAAGGTAGTGGGAGCAGTGAAGGAGATGACGAGGCAAGGGGTCAGGTTCACGGATGGCAAGGAGGAGCAATTCGACACAATAATCCTCGCCACAGGCTACAGGAGCAACGTGCCATCTTGGCTCAAGGATGCCGGTGACTTGTTCACGAGGGAGGGCATTTCCAAGGTCCCCTTCCCTAACAGCTGGAGAGGGCGGAATGGTCTCTACACCGTCGGATTCACTCAGCGGGGGCTCCTCGGCACGTCATCGGACGCCCTCAACGTCGCCAAAGACATACATTGCCAATGGAGAGAAAGGGACCGATCTGCTATTAATGTACTTGAAATAAGCAACTCTTCCTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MDNKPAQERRETWVPGAVIVGAGPSGLAAAACLAARGVPATVLERSDSLASTWRHRMYDRLALHLPKRFCELPLLPFPEEYPTYPSKDQFVAYMEAYAAAAGVAPRFGATVEEAAFDAAVGAWRVRLDGGEVLMARWLVVATGENAEPRVPDFPGMQKFAGCAMHTSEYKSGEQFAGKKVLVVGCGNSGMEVSLDLCRHGAKPSMVVRNTVHVLPREMFGLSTFGIAMALLRWLPIQLVDRFLLTAAHLILGNTGQFGLRRPKTGPIELKNLTGRTPVLDVGTLDHIKSGKIKVVGAVKEMTRQGVRFTDGKEEQFDTIILATGYRSNVPSWLKDAGDLFTREGISKVPFPNSWRGRNGLYTVGFTQRGLLGTSSDALNVAKDIHCQWRERDRSAINVLEISNSSF</aaseq>

Gene Sequence

<dnaseqindica>1..630#1009..1257#1516..1638#1810..2028#ATGGACAACAAGCCGGCGCAAGAACGCCGCGAGACGTGGGTCCCGGGCGCCGTCATCGTCGGCGCGGGCCCGTCGGGGCTCGCCGCGGCGGCGTGCCTCGCGGCGCGGGGCGTTCCGGCGACGGTGCTTGAGCGGTCCGACTCGCTGGCGTCCACGTGGCGCCACCGCATGTACGACCGCCTCGCTCTCCACCTGCCCAAGCGCTTCTGCGAGCTGCCGCTCCTCCCGTTCCCGGAGGAGTACCCGACGTACCCGTCCAAGGACCAGTTCGTGGCGTACATGGAGGCGTACGCCGCGGCGGCGGGCGTCGCGCCGCGCTTCGGCGCCACCGTCGAGGAGGCCGCGTTCGACGCGGCCGTCGGCGCATGGAGGGTGCGTCTCGACGGCGGGGAGGTGCTCATGGCGCGGTGGCTCGTCGTCGCGACGGGGGAGAACGCCGAGCCGCGGGTGCCGGACTTTCCCGGCATGCAGAAGTTCGCCGGGTGTGCCATGCATACTTCCGAGTACAAGTCCGGCGAGCAGTTTGCCGGTAAGAAGGTGTTGGTCGTGGGATGCGGGAATTCTGGCATGGAAGTGAGCTTGGATTTGTGCCGGCATGGCGCGAAGCCCTCCATGGTGGTGCGCAACACGGTAAGAAACTAGTTAAACTGAGCTTATGCTTTAGAACCTATCTATCATGCTCTGTTTTTCCCCTGTTTTTTTTTTGTCTGTATTTGATTTATCTTTCTGTGTGTCACATCTTATTGTCATTGGACATATTATTGTCATCTTAAATCCGTTTTCATTGTGCATGGCTGTATTGGATCATATTCAGGAAGGAGAAATTAGACCTGTTAACATCTCCCATTCCACACAACTTTATATGTCGGGTGTCTTGTCCTATCAACAGCCGTTTCTTTCTTCCATTTTGCCTCCCCCTGCCCTCCGATAATTACGCGTGTCATTTTCATTACATTATTATGATGACGGGTTACACAAATCTAAGCGCCGTGGTGATGTTTCGTCCAGGTGCATGTCCTACCAAGGGAAATGTTCGGTCTATCCACGTTCGGCATCGCCATGGCGCTGCTCCGATGGCTACCGATTCAGCTCGTCGACCGGTTCCTTCTCACGGCGGCTCACCTCATCCTCGGTAACACGGGGCAGTTCGGCCTAAGGCGGCCCAAAACAGGGCCCATCGAGCTCAAAAACCTCACCGGCAGGACACCCGTACTGGACGTTGGGACGCTAGACCACATCAAATCCGGCAAAATTAAGGTTAGTGCCAACCATTCAGCTAGCCTAGCTCCTTTCAAGAACCAGTAGTAGAAACTGAGACCAGTCAAACTGTCGAGCTGTACATGTGAGCTGCTGGGCGTCTACTTCCTAATGTGGCACATCAGCTATTCGCACATGCAGCATGTACATTTCTCTTGTGGAAAATGGTTCTCATATGGAGATTCATTTATTTTATCCCTGTGGGTTTTCTCCTGTGCTTTGGTTGATGAGGCGCTGATGGGAATCATGCATCACTAGGTAGTGGGAGCAGTGAAGGAGATGACGAGGCAAGGGGTCAGGTTCACGGATGGCAAGGAGGAGCAATTCGACACAATAATCCTCGCCACAGGCTACAGGAGCAACGTGCCATCTTGGCTCAAGGTAAAGCAGAGTGTGACTCACTCTTGTTCGTTTTATTTTTCTTTCTGTCCGCACTGCACTATACTACTACTAGTAATATATATCTCGAGATGATACGGATTATATGGTCAACTGTCAAGCCCAAGGATGTTAATTATATGTCTATATGTACGTGTGCTTTATGTGTTGTAGGATGCCGGTGACTTGTTCACGAGGGAGGGCATTTCCAAGGTCCCCTTCCCTAACAGCTGGAGAGGGCGGAATGGTCTCTACACCGTCGGATTCACTCAGCGGGGGCTCCTCGGCACGTCATCGGACGCCCTCAACGTCGCCAAAGACATACATTGCCAATGGAGAGAAAGGGACCGATCTGCTATTAATGTACTTGAAATAAGCAACTCTTCCTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004101