BGIOSGA004108

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Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004108| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004108, complete gene.| tag = P0047B0...")
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Gene Name

BGIOSGA004108

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004108, complete gene.

LocusTag

P0047B08.9

Ensembl Transcript ID

BGIOSGA004108-TA

Ensembl Protein ID

BGIOSGA004108-PA

Length

3312

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29402318..29405629

Sequence Coding Region

29402318..29402554,29402660..29402833,29403317..29403485,29403589..29403650,29404232..29404356
,29404461..29404578,29405492..29405629

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29402318..29405629 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29402318..29405629 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCCGTCGCTGATGAGATCCGCCTCGCAGGTCCTCCGCCGCCGCCGCGGCTACTCCTCCGCCTCCGGCCAGCCGGAGCGGAAGGTCGCCATCCTCGGCGCGGCCGGCGGCATCGGGCAGCCGCTCTCCCTCCTCATGAAGCTGAACCCGCTCGTCTCCTCCCTCTCCCTCTACGATATCGCCGGCACCCCGGGCGTCGCCGCCGACGTCTCCCACATCAACGCCCCGGCCCAGGTGAAGGGGTTCATGGGGGATGACCAGCTCGGGGAGGCGTTGGAGGGGTCGGACATCGTGATCATCCCGGCCGGCGTGCCGAGGAAGCCCGGCATGACCAGGGACGACCTCTTCAACATCAACGCCGGCATCGTTAAGAACCTCTGCACCGCCATTGCCAAGTACTGCCCGAATGCTCTTGTCAACATGATCAGCAACCCAGTGAATTCAACGGTCCCAATTGCTGCCGAGGTTTTCAAGAAGGCTGGGACTTACGATGAGAAGAAGTTGTTTGGTGTGACTACTCTTGATGTTGTTCGTGCTAAGACTTTCTATGCTGGAAAGGCCAATGTACCAGTTACTGATGTGAATGTCCCAGTTGTTGGTGGTCATGCGGGTATCACCATCCTGCCACTGTTCTCACAGGCAACTCCTGCAACTAATGCATTGTCTGATGAAGACATCAAGGCTCTTACCAAGAGAACACAGGATGGTGGGACTGAAGTTGTTGAAGCAAAGGCTGGAAAGGGCTCTGCAACCTTGTCCATGGCGTATGCTGGTGCTGTTTTCGCAAATGCTTGCTTAAAGGGTCTGAATGGAGTGCCGGACGTTGTTGAATGCTCTTTTGTGCAATCAACTGTAACAGAGCTGCCATTCTTTGCCTCCAAGGTGAAGCTTGGGAAGAATGGAGTTGAGGAAGTTCTTGGGTTGGGCCAGCTGTCAGACTTTGAGAAGGAAGGACTGGAGAATCTTAAGGGCGAGCTCAAGGCTTCAATTGAGAAGGGTATCAAATTTGCAAATGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MRPSLMRSASQVLRRRRGYSSASGQPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINAPAQVKGFMGDDQLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTDVNVPVVGGHAGITILPLFSQATPATNALSDEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFANACLKGLNGVPDVVECSFVQSTVTELPFFASKVKLGKNGVEEVLGLGQLSDFEKEGLENLKGELKASIEKGIKFANA</aaseq>

Gene Sequence

<dnaseqindica>1..237#343..516#1000..1168#1272..1333#1915..2039#2144..2261#3175..3312#ATGAGGCCGTCGCTGATGAGATCCGCCTCGCAGGTCCTCCGCCGCCGCCGCGGCTACTCCTCCGCCTCCGGCCAGCCGGAGCGGAAGGTCGCCATCCTCGGCGCGGCCGGCGGCATCGGGCAGCCGCTCTCCCTCCTCATGAAGCTGAACCCGCTCGTCTCCTCCCTCTCCCTCTACGATATCGCCGGCACCCCGGGCGTCGCCGCCGACGTCTCCCACATCAACGCCCCGGCCCAGGTACCTCCCCCGCGCTCTCATCGCTCGCCGTCCCCTCTTCCCGTTCCGCCGGGATCTGTCTAACGCTGCGGGCGCTTGGGTTTTGGGGGTTTCGGTTTCTCGCAGGTGAAGGGGTTCATGGGGGATGACCAGCTCGGGGAGGCGTTGGAGGGGTCGGACATCGTGATCATCCCGGCCGGCGTGCCGAGGAAGCCCGGCATGACCAGGGACGACCTCTTCAACATCAACGCCGGCATCGTTAAGAACCTCTGCACCGCCATTGCCAAGTACTGCCCGAATGTAAGATCTCTCCCTCACTCGCAGCACTCTGGATCTGCAGCTCTTGTGCCTGTAGCTCTTGTGGTCGCTTGTGGGTATTGCTCGCTGCAATTAGGTCTAGTAACGGAATCGTAAACATGATTTGATTAGAGGTGTGAAAAAAGCTGTACTAGATTACTGAAAAGGCGCCAAACTTTTCCCCAGCACGCGTGTATCAGCATCCAGCACTCATTGTATATCTCTTGTTGAATAATCTGGTTCCCTGGCTGAATGCTGATAATTTGGTGCAGCAATTATTTTTATCCCCACGGGTCATTTATTAACCTGGACAAATCAGAAGAATATCATTGTTTACCCTGACTTATTGCTTCTTGTTATCTGCTTATCTTTGATAAGTTCTATCAATTTTGTTTTCAGTCTTCGTATCTTTGAAACTCATGCATGTTCATTGGTATTACATGCTTAATTACCAACACGTTCATTAAATTCGTTCATGTATATTAGGCTCTTGTCAACATGATCAGCAACCCAGTGAATTCAACGGTCCCAATTGCTGCCGAGGTTTTCAAGAAGGCTGGGACTTACGATGAGAAGAAGTTGTTTGGTGTGACTACTCTTGATGTTGTTCGTGCTAAGACTTTCTATGCTGGAAAGGCCAATGTACCAGTTACTGGTAATGACCTGAGAGTCACTTGAGTACTGAGAATTGATATAGTAGGGTTTTGGTGTTTTTTCTCTCTTATCTTCTGTTGGATTTGTTTCTCCCTTTTTGGCAGATGTGAATGTCCCAGTTGTTGGTGGTCATGCGGGTATCACCATCCTGCCACTGTTCTCACAGGTATGGATTTTGACTTTTGATTAACATAACTCAGAATGTCATACCAGTAGGATCCATATTTACATATCATAAAAATAAGATTATCAGATTGGTACTCCCTCCGTCCCGAAATAACCAAACCTCGTAGGACATGTCACATCCTAGTACGAGGTTGGTTTATTTTGGGACGGAGGGAGTATGCCTACAATATATATATTTTTTGTTATGGCACCATAATCATATCATGCATGCTATGGTTAAAACATGCTAACTTAAGAATTACTGTTCATGTGTTCTCTTATTCTTGTAGTAAACTGCACATGTTTATTATGATAAAAAAGTTAATAACCAAGTTTGTTATATTTTCTCGCTCAAGGTTGACATAGTTTCTGTATAGGAATCTTTTATCTTTATAGAATCATCGCTAACATAGTCTAATATGAAGTGTACAATCATTTTTTGGATTACAAATAAGAACACAAACATGACCAATATATAAGATATAACTGTGTTATTTTGGCTGTTCAAAAATATGAAGCAGATGATGCTTTTATGAGCTCATAACTTAACAATCCAACTGAAGGAACTCTTTATTTGGGTAGGCAACTCCTGCAACTAATGCATTGTCTGATGAAGACATCAAGGCTCTTACCAAGAGAACACAGGATGGTGGGACTGAAGTTGTTGAAGCAAAGGCTGGAAAGGGCTCTGCAACCTTGTCCATGGCGTAAGTTAAAATAAACATAACAGCTGTGCAGAGTGAGGAATTAGTGCTTTTATGGCTAATGGTAGTGCTTTTATCCTTACTCATTTGATTCTATTGGGGGACAGGTATGCTGGTGCTGTTTTCGCAAATGCTTGCTTAAAGGGTCTGAATGGAGTGCCGGACGTTGTTGAATGCTCTTTTGTGCAATCAACTGTAACAGAGCTGCCATTCTTTGCCTCCAAGGTACATTTTCTTTTCACAACTTTCTTTGTCTGTTGCAGTTGTGATCTATATCATTTGGTGGAGTAAATCTAGAGTATTTGACATTCCTTCTCATCTTAATGATATCTCTTTTATTCTATTCCTCCTTTTTCTAATGTGCGGCTCTAGTTTTGTATGCATATTGTTTTATTTGCGTCCTCCTCTTGCTGTCCAAAAATGTTAGAAGATGGACAGGATCGAACCATGCAAATTTTTTATTGCATAGAAAGATATATATTAATATACTAAATCCTATATAATAGTGGTTCTTGTCTCTGGTTAGATTCCTGTATCCTGAATGAATGTGTGGTTAGATACTTTCTTTCTTTTTTTACTTTGCAATTAATGGTTATACCTCATTTATGGAATTGCTACCTTATTATATACTTTCAGAATGTGTTCATTTTATTGGCTCATCTATTACTATGAACTGTGGAAGTGTGCATTTTGGTGCTCTGATTCTATGAACCTGAGACCATCCATACAAATTTAGATATTGTGCATGGCATCCATGTACTGCTGCAAAAGAAGTTACGGTTCATCTGGTTTCCTATATTATAGGCTGGTTACTGTAAGGCTGTTGCATGGTTATCAAGAAGCATTTTTTTTTGTACAAAAGGTCATAAAAATGCCCTCAAATATGCCATGCCAAATCTCATAGCAAATCATGTATGCAAATTGCAGTAAGATTTCCTGTGGTTTGCTGCTTTGCTTTATGTTGTGCTCATGGTGACATTATTTACATATTACATAGACGTAGTGGGTGCTTAGCCTAACGTGAATGTGATTCTATCATCTGGTCATTTCAAAACTGGTTTTTGCTTTAGAAATCTTCAATCAGTAAACTTTATGGTCAAGCTGCTGAAATATTTATGTTCCTTCACTGATGTTACAGGTGAAGCTTGGGAAGAATGGAGTTGAGGAAGTTCTTGGGTTGGGCCAGCTGTCAGACTTTGAGAAGGAAGGACTGGAGAATCTTAAGGGCGAGCTCAAGGCTTCAATTGAGAAGGGTATCAAATTTGCAAATGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004108