BGIOSGA004110

From RiceWiki
Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004110| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004110, complete gene.| tag = OS01G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004110

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004110, complete gene.

LocusTag

OS01G0649400

Ensembl Transcript ID

BGIOSGA004110-TA

Ensembl Protein ID

BGIOSGA004110-PA

Length

3110

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29414652..29417761

Sequence Coding Region

29414652..29414865,29416624..29416772,29416861..29417149,29417481..29417761

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29414652..29417761 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29414652..29417761 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCTGCCGTTCCTGCGGCCGTACTGGGGAGGGCAGACCGCGGGGGACTTCGCCAGCGGGGCCAACTTCGCGGTGGGCGGCGCCACGGCGCTCGGCCCGGACTTCTTCCGGGAGAGAGGGGTGCCCACGGACGACGGTGTCGTGCACCTCGAGATGGAGATGGGGTGGTTCCGCGATCTGCTCGACATGCTCTGCGCCGGCGACATGGACGGTTGCAAGGGTATGATGAATCAATCTCTCTTTTTGGTCGGAGAAATCGGAGGCAATGATTACAACTATCCTCTTATGAGCGGCGTGCCCATTGAAAAGATTCGCAGCTTCACTCCTAGTGTTATTGCCAAAATTTCTTCCACAATCACCTTGAGTTCGCAGGAATTGATCGGACTTGGAGCCAAGACACTAGTTGTTCCTGGTAACCTCCCAATTGGATGTATTCCAACATACCTCATGCAATTTGAGAGTGATAAGAAGGAAGATTATGAGCCAGAGATAGGTTGCCTTAGGTGGATGAATGAGTTCTCGCAATACCACAACAAACTTTTTATAGATGAATTGGAAAACTTGCGCAAGCTTCACCCCGATGTGGCCATCATCTATACTGATTACTATGGAGCTGCCATGGAAATTTTTCTTTCCCCTGAACAATTTGGAATTGAGGATCCTTTGGTCGCTTGCTGTGGTGGAGGAGGACCTTATGGTGTATCTGCATCTGCAGGCTGTGGATATGGTGAATACAAAGTGTGTGATGACCCATCAAAGTATGCATCGTGGGATGGCTTTCATCCATCAGAAGCTGCATACAAGGGCATTGCAATTGGCCTGCTACAGGGCCCATACACTCAACCTCCAATCGCTAGCATCACCGATTCTTGTCTACAGATCATTGGCCTCGGTTCTTCTGCTGAACGCAAGGTCATCTATGACATGTAG</cdnaseq>

Protein Sequence

<aaseq>MGLPFLRPYWGGQTAGDFASGANFAVGGATALGPDFFRERGVPTDDGVVHLEMEMGWFRDLLDMLCAGDMDGCKGMMNQSLFLVGEIGGNDYNYPLMSGVPIEKIRSFTPSVIAKISSTITLSSQELIGLGAKTLVVPGNLPIGCIPTYLMQFESDKKEDYEPEIGCLRWMNEFSQYHNKLFIDELENLRKLHPDVAIIYTDYYGAAMEIFLSPEQFGIEDPLVACCGGGGPYGVSASAGCGYGEYKVCDDPSKYASWDGFHPSEAAYKGIAIGLLQGPYTQPPIASITDSCLQIIGLGSSAERKVIYDM</aaseq>

Gene Sequence

<dnaseqindica>1..214#1973..2121#2210..2498#2830..3110#ATGGGGCTGCCGTTCCTGCGGCCGTACTGGGGAGGGCAGACCGCGGGGGACTTCGCCAGCGGGGCCAACTTCGCGGTGGGCGGCGCCACGGCGCTCGGCCCGGACTTCTTCCGGGAGAGAGGGGTGCCCACGGACGACGGTGTCGTGCACCTCGAGATGGAGATGGGGTGGTTCCGCGATCTGCTCGACATGCTCTGCGCCGGCGACATGGACGGTATGTTTGAATCAACCAACACCTTTCGGCTTTCGGCTTTCGGCTTTCGCCTTGCACCACCAACCTTTGAGGCTTCGACAATGACGTTTGGAACGAGATCGTGGCAGTTCTCATTTTCTAAGCACTAGTCATAGCAGTTTGCTATTAGTTGGTGGGGCTTTATTGTCTAGAAAGGTGCGTGTCTAGAGATACCACAATCATTAACAATATCTATCTATCTATCTATCCATCTATCTATTATCTATCTATCTATTATATTATTAAAGGATTAGAAAAAGGAGCCTCCACGTTCGCTCACGTTCGCTCTCATGGCTTAGAAATTCTCACATTAATCGGAGAAAAAGAAAAAAACAAAGTCCATATAGAAATACAATTTAGAAATAGTTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGAGGAGACTAGAGTACATATAGAAATACAATTAGAAAATAACTGAAATTCTGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATACAATTAGGAAATAATAGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATGGAAAATCAGAGTCCATATTAGAAATACAATTTAGAAATAGTTGAAATTCGAAATTAAAAAATAAAGAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGAAAATAACTGAAATTCGGAATAAAAAAAAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATACAATTAGGAAATAATAGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATACAATTAAGAAAAAAAATTCAGAATTAAAAAATAAGGAATGTTAGAAGTAGAGAATAGAGTCCATATAGGAATTTAAAACTAACTAAAATTCAGAATAAACATAATAAAATTAAAAGTAGAGTTTAGAGTCCGTATAAAAATACAATTTCTAAATAACTAAAATTCAAAATTATGAAAAATATGGGAAGAAGAGTTTAAATTAATATAGGAATACAATTTAGAAGTAACTGAAATTTGAAATTAAAATTAAAGAATACTGAAAGATGAATTTAGAATCCACATAGAAATACAATTAAAAATAATAAAAGTTCAGAATTAAAAAAAAATATTAAAAGACAAGTCTAGAGTCCATATAAGAATATATATAATTTACAAATAACTAAAGTTTGATATTAAAAATAATTAATAACTAACACGTATATAAAATACAATATAAATATTACGCATGAGTAGTTTCGTAAAGTTATTGTAAAATTTAAAATTATATTGTCATTGTAATATATTTTAATAATATAGTGAGAAAATATATATGCTATTATATAAGAGAAAATATAATGGTACTAGCCGCGTAATCTGCGCGAGCCACCATGCAAGTTTGGAGTATACTACTACTGCTACTATACAATAATGCACACCATGCCACTGCCAAATATTTGGTCAACATGATATGATTTCCACGTGAATAATTGCTTAACCCTTGAATTGGTTGCATAGAATAAAATAAAAAAAATAAATATGCCAGGTCAATGATTGTGGGTTTGCTACAAATCTGTCTAGTTTATAATAGGATAATAAACGAACATGCTAGAAGTAGTAGGTGAAGATAATTTAGTTTAACTACCATATAAAGCAGCAATTTTGATAGTTAAAGTTCCCTTTCAGCTATTACTAAACGATGTTTATGGCACAGGTTGCAAGGGTATGATGAATCAATCTCTCTTTTTGGTCGGAGAAATCGGAGGCAATGATTACAACTATCCTCTTATGAGCGGCGTGCCCATTGAAAAGATTCGCAGCTTCACTCCTAGTGTTATTGCCAAAATTTCTTCCACAATCACCGTGAGTAATGTGCCTGCATCTTTTTATATACCTTGAGCTCCTGTTTCACGAAGCAATATAATATTATATAGCTTGTAATGCAATAAAGTTGAGTTCGCAGGAATTGATCGGACTTGGAGCCAAGACACTAGTTGTTCCTGGTAACCTCCCAATTGGATGTATTCCAACATACCTCATGCAATTTGAGAGTGATAAGAAGGAAGATTATGAGCCAGAGATAGGTTGCCTTAGGTGGATGAATGAGTTCTCGCAATACCACAACAAACTTTTTATAGATGAATTGGAAAACTTGCGCAAGCTTCACCCCGATGTGGCCATCATCTATACTGATTACTATGGAGCTGCCATGGAAATTTTTCTTTCCCCTGAACAATTTGGTGAGTGCAGCTAGTTCATTACTGTTTGTAAGCTTTATACTATTAATTAATTCTAGTTTGTAGGTTACTACAAGAAATAAAATACTAGCTTTCTGTTGACCTGTTAAATTCGACTTCCATAGCATTTCTTGAACAAAGGAAATCTTTCTGTAAATATGCTTGTACCACAATCATAACATCTAATTAGGGTTTCTCTCCCTCCATATATTTACCAGGTTGGCTATTCTATTTTCATCATGTCATGGAATGCACTCCTCAACTACTTTCTACATTGATAAAGAACATTTTTTCTTGTTGGTAGCTTGTTTAACACTCCCAAACTGCGATTCAGGAATTGAGGATCCTTTGGTCGCTTGCTGTGGTGGAGGAGGACCTTATGGTGTATCTGCATCTGCAGGCTGTGGATATGGTGAATACAAAGTGTGTGATGACCCATCAAAGTATGCATCGTGGGATGGCTTTCATCCATCAGAAGCTGCATACAAGGGCATTGCAATTGGCCTGCTACAGGGCCCATACACTCAACCTCCAATCGCTAGCATCACCGATTCTTGTCTACAGATCATTGGCCTCGGTTCTTCTGCTGAACGCAAGGTCATCTATGACATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004110