BGIOSGA004125

From RiceWiki
Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004125| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004125, complete gene.| tag = OsI_030...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004125

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004125, complete gene.

LocusTag

OsI_03093

Ensembl Transcript ID

BGIOSGA004125-TA

Ensembl Protein ID

BGIOSGA004125-PA

Length

4362

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29572341..29576702

Sequence Coding Region

29572341..29572610,29572712..29572804,29573396..29573461,29573742..29573882,29574335..29574562
,29574678..29574795,29574863..29575002,29575129..29575296,29575390..29575447
,29575558..29575697,29575824..29575991,29576085..29576240,29576337..29576702

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29572341..29576702 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29572341..29576702 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCCACCTCCACTTCCTCCACCGCGCTCGCCCACCCCAAAACCCTAAACCCCGCCTCCAAATCCGCGGCCGCCGGCTCGGTCTCCTTCCCCGCCGCCCAGCCCCCATGCCCCCTCGCCGCCTCCGCCGGCGGCCGCCGCCGCCGCGGCGCCGTGGCCGCCAAGGTCTCGTCGCCGCAGGTGATCGGGGCCACCATGCCGTCGCTGGACTTCGAGACATCCGTCTTCAAGAAGGAGAAGGTGTCTCTAGCTGGCCATGACGAGTATATTGTGAGGGGCGGGAGGAATCTGTTCCCGCTGCTGCCGGAGGCGTTCAAGGGGATCAAGCAGATCGGCGTAATCGGATGGGGTTCTCAGGGTCCTGCACAAGCTCAGAACCTGAGGGACTCACTTGCTGAGGCAAAATCAGACATCGTTGTTAAGATTGGTCTCCGGAAAGGTTCTAAATCTTTTGAAGAAGCACGCGCAGCTGGATTTACTGAAGAGAGTGGGACACTTGGAGATATATGGGAGACTATCTCAAGTAGCGATCTTTTGTTGTTGTTGATATCAGATGCTGCTCAGGCGGATAACTATGAGGAAATTTTCTCACACATGAAACCCAACAGTATTCTTGGATTGTCACATGGATTTCTCCTTGGACATTTGCAATCTGTTGGCCTTGATTTCCCTAAAAACATCAGTGTTGTTGCTGTGTGTCCCAAGGGAATGGGCCCATCAGTTAGAAGGCTTTATGTTCAGGGAAAAGAAGTAAACGGTGCTGGTATCAACTCCAGCTTTGCTGTACACCAGGATGTTGATGGAAGAGCAACAGATGTCGCTCTTGGATGGTCAGTTGCTCTAGGTTCTCCTTTCACATTTGCTACTACTCTAGAGCAGGAGTACCGAAGCGATATTTTTGGCGAGCGAGGTATTTTGCTTGGGGCTGTACATGGTATTGTGGAGGCTCTTTTCAGGAGATACACAGAGCATGGGATGGATGAGGACTCAGCATACAAGAACACTGTTGAGTGCATCACTGGAATCATCTCTAAAACTATTTCGAAAAAGGGGATGCTTGAAGTGTACAATTCATTGACAGAAGAAGGAAAGAAGCAATTTATCGAGGCTTACAGTGCAGCATATTATCCATGCATGGATATACTATATGAATGCTATGAAGATGTTTCTTCTGGAAGTGAAATTAGAAGTGTTGTTTTGGCTGGAAGGAGATTTTATGAAAAGGAAGGACTTCCTGCTTTCCCGATGGGCACATTGATCAACACGTATGTGGAAGGTATTTTGCTTGGGGCTGTACATGGTATTGTGGAGGCTCTTTTCAGGAGATACACAGAGCATGGGATGGATGAGGACTCAGCATACAAGAACACTGTTGAGTGCATCACTGGAATCATCTCTAAAACTATTGCGAAAAAGGGGATGCTTGAAGTGTACAATTCATTGACAGAAGAAGGAAAGAAGCAATTTATCGAGGCTTACAGTGCAGCATATTATCCATGCATGGATATACTATATGAATGCTATGAAGATGTTTCTTCTGGAAGTGAAATTAGAAGTGTTGTTTTGGCTGGAAGGAGATTTTATGAAAAGGAAGGACTTCCTGCTTTCCCGATGGGCAACATTGATCAAACACGGTATGTGGAAGGGGGTGAAAGGGTGCGGTCAACACGGCCAGCAGGTGATCTTGGCCCATTACATCCTTTCACTGCTGGAGTGTATGTTGCACTTATGATGGCACAGATTGAAGTCCTTAGAAAGAAGGGCCACTCTTACTCGGAGATCATCAACGAGAGTTTGATCGAGTCTGTGGATTCCCTGAACCCATTCATGCATGCTCGTGGGGTGGCCTTCATGGTTGATAACTGCTCCACAACAGCCCGGTTGGGATCAAGGAAATGGGCGCCACGCTTCGACTACATCTTGACCCAACAAGCTTTTGTGACTGTTGACAAGAATGCTCCAGTTAATCAAGACCTCATCAGCAATTTCTTCTCCGATCCCGTCCATAGTGCCATTGAAGTCTGTGCTCAGTTGAGGCCCACCGTTGACATTTCAGTGCCTGCTGATGCAGACTTTGTGCGTCCAGAGCTGCGACAATCTTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAATSTSSTALAHPKTLNPASKSAAAGSVSFPAAQPPCPLAASAGGRRRRGAVAAKVSSPQVIGATMPSLDFETSVFKKEKVSLAGHDEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFEEARAAGFTEESGTLGDIWETISSSDLLLLLISDAAQADNYEEIFSHMKPNSILGLSHGFLLGHLQSVGLDFPKNISVVAVCPKGMGPSVRRLYVQGKEVNGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVEALFRRYTEHGMDEDSAYKNTVECITGIISKTISKKGMLEVYNSLTEEGKKQFIEAYSAAYYPCMDILYECYEDVSSGSEIRSVVLAGRRFYEKEGLPAFPMGTLINTYVEGILLGAVHGIVEALFRRYTEHGMDEDSAYKNTVECITGIISKTIAKKGMLEVYNSLTEEGKKQFIEAYSAAYYPCMDILYECYEDVSSGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRYVEGGERVRSTRPAGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESLIESVDSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKNAPVNQDLISNFFSDPVHSAIEVCAQLRPTVDISVPADADFVRPELRQSS</aaseq>

Gene Sequence

<dnaseqindica>1..270#372..464#1056..1121#1402..1542#1995..2222#2338..2455#2523..2662#2789..2956#3050..3107#3218..3357#3484..3651#3745..3900#3997..4362#ATGGCGGCGGCCACCTCCACTTCCTCCACCGCGCTCGCCCACCCCAAAACCCTAAACCCCGCCTCCAAATCCGCGGCCGCCGGCTCGGTCTCCTTCCCCGCCGCCCAGCCCCCATGCCCCCTCGCCGCCTCCGCCGGCGGCCGCCGCCGCCGCGGCGCCGTGGCCGCCAAGGTCTCGTCGCCGCAGGTGATCGGGGCCACCATGCCGTCGCTGGACTTCGAGACATCCGTCTTCAAGAAGGAGAAGGTGTCTCTAGCTGGCCATGACGAGGTCCGATTTGTGCCCCCCTGTCTCCTCCTTCCGTGACCCTCTTGGTGGTTAATCTGTGAAGGGTTGCTGTTTTGTGATGTTTGTGGGTGGTCTTGCTGCAGTATATTGTGAGGGGCGGGAGGAATCTGTTCCCGCTGCTGCCGGAGGCGTTCAAGGGGATCAAGCAGATCGGCGTAATCGGATGGGGTTCTCAGGTTAAGAAGATGCGAACTTTCTTTTTCCCTCAAATGGTTGCTTTTTGCCACCTTTGTTGATCTGGTGAATATACCCATCGTCCTTATATTTGTGGCTCGAATTTGAGTGCTTTAAGTACCATTGATAAGCAAATGGATATGCAGCACTGACTTGGGGATATCACTTTATTTGTGACAGCACAGTTTTTTTTATCAGATAATAGAGGGCAATCAACGTTATTATTGACTGAGCATTCTCTGGTCACTTAGTTCTTTTTTACCATTTCTGTCAGGATGGTATTTCAAGTTTAGTGTGACTATATATGGGATAGAGCTTGCCTTTAGTTATGCTAAGTAGAAGTCAGTCTGTAATTATGAATGTTCTTTGGTGCCTTATCAGTGAAGTGTTCAAGATTGAAATTAGTTAACAGCATGCGTAGAGCTCTTACTGAATAAAAGCAGTTGCTTGATTAGCATTTAGCTCGTTTAAGTGCTAATAATTTACCATCAGTACTTTTTCCCCATATATCATGACATGTTCTGGACAGAAAATTACATATATTAACAAAGCTAAATTTGTGCTATAACAGAGGCTATGCTTTTTATTTGCAGGGTCCTGCACAAGCTCAGAACCTGAGGGACTCACTTGCTGAGGCAAAATCAGACATCGTTGTTAAGGTTAGTTTTTTCTTTAATCCTCTGGTGGCCCGACATGTCTTAGACGAGGCCGTTTTTCATGTATAGATTCATTAAGTGCTGTTAACTTTGCATGCCTAAGCTATCAAGTATTTTGTTGTGTCCTGTAACTCAAACGCACCAATTTTCTGTAAGATGGCTATCTGCCTTTTCCTCTTTTCATTTTAGAATGTGTGCATGGTCATCTTTTTCAGCACTTCAGCAGTTGTACTGCACTACAGCTACTTACTGGTGCATCTGACTTGAATATCTTTTGTTTCAGATTGGTCTCCGGAAAGGTTCTAAATCTTTTGAAGAAGCACGCGCAGCTGGATTTACTGAAGAGAGTGGGACACTTGGAGATATATGGGAGACTATCTCAAGTAGCGATCTTTTGTTGTTGTTGATATCAGATGCTGCTCAGGTTTATTTCTGTCCTACCTGGTTTAATTTCTAAGAGATTTTAGAGTGACACTGTACAATTCTGAAACTATATTGATCATAATTTGCCATACTAATATATATTGATATTTCATGTTGACTTCCACATACTGAATCTTAGTTGGACCACATGTTGCTCAGATATATTTCACACGGCACAATACATGTTTTGTAGAATTAAAAAGTAACATAAATCCATATATTATGATATTTATTATGTCAGCTCGAGTTTTTTTTTATTTACAGAATGCCATCTAGTTGTTTATAGATCATAATTTTGAATGTCTTAAAAACAGTTTTGTTAAGCTTGTGTGTCTGATTGTCTGTTATGCTGTGGATTTGTTATACAGTGAACTTTAACTGATGTCTCATTTCTATGTGGCCTGCACAATTTTGCTACGGATATTGACATGCATTGTATAATACTTTGTACAGGCGGATAACTATGAGGAAATTTTCTCACACATGAAACCCAACAGTATTCTTGGATTGTCACATGGATTTCTCCTTGGACATTTGCAATCTGTTGGCCTTGATTTCCCTAAAAACATCAGTGTTGTTGCTGTGTGTCCCAAGGGAATGGGCCCATCAGTTAGAAGGCTTTATGTTCAGGGAAAAGAAGTAAACGGTGCTGGTATCAACTCCAGCTTTGCTGTACACCAGGTATTTATGTTGCTACTCACCTTGTTTGATTTCATTTGAGAATAAATGCTCTTTTCCTTTGGTCCTTCCATCAAGTATATAGTTGCTAATCACTTTTGTATGTTCCATTATACAGGATGTTGATGGAAGAGCAACAGATGTCGCTCTTGGATGGTCAGTTGCTCTAGGTTCTCCTTTCACATTTGCTACTACTCTAGAGCAGGAGTACCGAAGCGATATTTTTGGCGAGCGAGGTGATTTACTTTCCGGTGTACACTAACAAATTTCTGCCTAAGCTTGTGGCTAATAATTTATTTCCAGGTATTTTGCTTGGGGCTGTACATGGTATTGTGGAGGCTCTTTTCAGGAGATACACAGAGCATGGGATGGATGAGGACTCAGCATACAAGAACACTGTTGAGTGCATCACTGGAATCATCTCTAAAACTATTTCGAAAAAGGTACATGCATATATTTTTCCGTTATGCATTTAAGGCTTTTTACTTATTTCACAACAAGGTCCACGATTCTGTTTTTAAATCTCTTTTGTGCCTTTTTACTTGATGTATAACTACCAATTGTATCAGGGGATGCTTGAAGTGTACAATTCATTGACAGAAGAAGGAAAGAAGCAATTTATCGAGGCTTACAGTGCAGCATATTATCCATGCATGGATATACTATATGAATGCTATGAAGATGTTTCTTCTGGAAGTGAAATTAGAAGTGTTGTTTTGGCTGGAAGGAGATTTTATGTACGCTCTCTTCCATATCCATAAAACATATCATAATCTTATTTCCTTGGGTTTTGAAACAAAATAAAATATTTGACGCCTGTATTCTTATAGGAAAAGGAAGGACTTCCTGCTTTCCCGATGGGCACATTGATCAACACGTATGTGGAAGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCGGTGTACACTAACAAATTTCTGCCTAAGCTTGTGGCTAATAATTTATTTCCAGGTATTTTGCTTGGGGCTGTACATGGTATTGTGGAGGCTCTTTTCAGGAGATACACAGAGCATGGGATGGATGAGGACTCAGCATACAAGAACACTGTTGAGTGCATCACTGGAATCATCTCTAAAACTATTGCGAAAAAGGTACATGCATATATTTTTCCGTTATGCATTTAAGGCTTTTTACTTATTTCACAACAAGGTCCACGATTCTGTTTTTAAATCTCTTTTGTGCCTTTTTACTTGATGTATAACTACCAATTGTATCAGGGGATGCTTGAAGTGTACAATTCATTGACAGAAGAAGGAAAGAAGCAATTTATCGAGGCTTACAGTGCAGCATATTATCCATGCATGGATATACTATATGAATGCTATGAAGATGTTTCTTCTGGAAGTGAAATTAGAAGTGTTGTTTTGGCTGGAAGGAGATTTTATGTACGCTCTCTTCCATATCCATAAAACATATCATAATCTTATTTCCTTGGGTTTTGAAACAAAATAAAATATTTGACGCCTGTATTCTTATAGGAAAAGGAAGGACTTCCTGCTTTCCCGATGGGCAACATTGATCAAACACGGTATGTGGAAGGGGGTGAAAGGGTGCGGTCAACACGGCCAGCAGGTGATCTTGGCCCATTACATCCTTTCACTGCTGGAGTGTATGTTGCACTTATGATGGCACAGGTGGATGATTGTATTCTTTTTTTCAAATTAGAACCCATTTATATACATTGGTTTATAAAATGTTTATTCATATGCTCTGTTTTGCACTGATTTTAGATTGAAGTCCTTAGAAAGAAGGGCCACTCTTACTCGGAGATCATCAACGAGAGTTTGATCGAGTCTGTGGATTCCCTGAACCCATTCATGCATGCTCGTGGGGTGGCCTTCATGGTTGATAACTGCTCCACAACAGCCCGGTTGGGATCAAGGAAATGGGCGCCACGCTTCGACTACATCTTGACCCAACAAGCTTTTGTGACTGTTGACAAGAATGCTCCAGTTAATCAAGACCTCATCAGCAATTTCTTCTCCGATCCCGTCCATAGTGCCATTGAAGTCTGTGCTCAGTTGAGGCCCACCGTTGACATTTCAGTGCCTGCTGATGCAGACTTTGTGCGTCCAGAGCTGCGACAATCTTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004125

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004125&oldid=41849"