BGIOSGA004137

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Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004137| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004137, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA004137

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004137, complete gene.

LocusTag

OSJNBA0049H05.23

Ensembl Transcript ID

BGIOSGA004137-TA

Ensembl Protein ID

BGIOSGA004137-PA

Length

5216

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29798626..29803841

Sequence Coding Region

29798626..29798676,29798773..29798816,29798892..29798970,29799055..29799177,29799533..29799715
,29799795..29799881,29801382..29801488,29801620..29801707,29802037..29802117
,29802215..29802291,29802415..29802550,29802780..29802842,29803215..29803841

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29798626..29803841 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29798626..29803841 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGACTTCGACGTCGCTGACCGCGTCAGCGTCGGGCTCCACGGGCGGTCGGACGAGATGATCTTCGAGGCCACGGTGCGCGATCCGAGCAGTGAGCTGTACGGTTCGACGGTGGTGCTGCGGCAGCTGATGAGCTTTCAGGCGAAGCGCAGGGGCCGGCGCGCGCTGGAGGTGCTGAAGAAGCTGGCTCGCCGACAGATGATGTACCACTCTTACGCGATGCAGGTCCATGGATATGTTACTCCAGGCAATGACGTGGAGCAGGACGATGGATCCTTCATCCTGGTGCACGGGTACCATGGGAGTTACTCTTTGCGCCACTGGTTGCAACTCTCTGATTGGCTTCCAACCTTAGAAGCAACATTAGCGTTGGATGAGGAACAAGTTAGGAGGGTAGGTGATGATTCAGTAGGAGGACCTGCTGTAACCCGGCAGCTACGTCTAATCAGGATATTGATGAGAGACCTTCTGATTGGTGTGAATTATCTGCATAGCCATGGGCTAGCACATACTGAGCTTAGATTGGAGAATGTTCATGTAAGCCCAATAGACAAACATGTTAAAGTTGGTATTCTTGGGAATGCTGTTGATTTTCATGACAATGATCCTAGAAATAGCACATTAGCAAGTAATGATGAAAGGAGAAAAATGATGATTGCATTTGACATGAGATGTGTTGGCTTTATCATGGCAAAGATGGTTCTGAGAGAGCTAATGGATTCTTCTACTTTCCTAAAATTCAAGTCATTCTTGACAAAGGGAGATGACCCAGCATGTCTGCGTGAGTTCCTTTTACCTATTCTGTGCCGAAATTCTCCATCCGGGAATATTGGTCTGCAGATGCTTGATCGACAATGGGGTGCTGGTTGGAATCTTTTGGCGTTATTGCTGGCAACAAAACCTGACAAAAGGATAAGTTGTGTGGATGCATTGAGGCACCCCTTCCTTTGTGGACCTAAATGGCGCATAAATCCATCAGTTGATGTCATACGGTGGGGCTTGGGTTCTACTGCTGTCCGCATGGCTGAAGATTATATTTATGGACAGCATCAGCGTAGACGATTAGCATATTTTGTTGAATTGATGGAGGTGCTAAACCCTAATCCAAGAACAGAGAACTGGCTTAACATCCTACCTGGTCACTGGCGTCTCTTATACTGTACTGGAAGGCACATCGGTCTAACACTTCGTCAGCCTTCTCCGAGAATCCTCATCACTGATGTGTTTCTCACATTTGCACAAACTTCAGACTCCATTGATCCTGTGTTCTCTCTGACCTCAGACATTGGTTTCAAAATTATGGCAGAATCTGATTGGCCTCATGACAAATCTGGTAGCGAAGGAACATTATCTGTTACCTCATCTGCGAGGATAGCAACTGGAAGAATTTATATTCACGAACAGGATGGTGATGATAGTAGGGTTGCATCTTCAAGATCTTCTAGGAGATACCTTCGTGGTAAGTGGAGAAAAGTTTCAAAAATGAAAGAGCTGCCTGCTAGCCTCCCCACAGTAAACATTACCATGGATGAACTCGACGTATCAATGAGCTGCAGCTCGACTTTAAATGTCAGTTCTGCGCAGAAGGTGCTGCAAGAGATCCGCACTCAGACCCCGCCAGAAATGTTTGATTTATCAAAAATTGTTTGTGGGACATACGTTGATGCAAGGTTGATGATTCTTCGTGGTGTTAACGGGTCCGCGTTATTTTTCACCAGATCAAATTCTAGAGCTGATTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MGDFDVADRVSVGLHGRSDEMIFEATVRDPSSELYGSTVVLRQLMSFQAKRRGRRALEVLKKLARRQMMYHSYAMQVHGYVTPGNDVEQDDGSFILVHGYHGSYSLRHWLQLSDWLPTLEATLALDEEQVRRVGDDSVGGPAVTRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHVSPIDKHVKVGILGNAVDFHDNDPRNSTLASNDERRKMMIAFDMRCVGFIMAKMVLRELMDSSTFLKFKSFLTKGDDPACLREFLLPILCRNSPSGNIGLQMLDRQWGAGWNLLALLLATKPDKRISCVDALRHPFLCGPKWRINPSVDVIRWGLGSTAVRMAEDYIYGQHQRRRLAYFVELMEVLNPNPRTENWLNILPGHWRLLYCTGRHIGLTLRQPSPRILITDVFLTFAQTSDSIDPVFSLTSDIGFKIMAESDWPHDKSGSEGTLSVTSSARIATGRIYIHEQDGDDSRVASSRSSRRYLRGKWRKVSKMKELPASLPTVNITMDELDVSMSCSSTLNVSSAQKVLQEIRTQTPPEMFDLSKIVCGTYVDARLMILRGVNGSALFFTRSNSRADS</aaseq>

Gene Sequence

<dnaseqindica>1..51#148..191#267..345#430..552#908..1090#1170..1256#2757..2863#2995..3082#3412..3492#3590..3666#3790..3925#4155..4217#4590..5216#ATGGGCGACTTCGACGTCGCTGACCGCGTCAGCGTCGGGCTCCACGGGCGGGTGGGTTCTCCGCACCCCCCCACGGATTCGGTTTCCTACTAGTGAATTTTGCTGTGTTGTTGCTCGTGTGTGGTGAATTTCTGCTCCGTGCTGCAGTCGGACGAGATGATCTTCGAGGCCACGGTGCGCGATCCGAGCAGGTTGGTGGCATGGAGCAAATCAGGTAGTGCGAATTCGTTGGATCGATGCTCATTTGTTCTGATTTTGGTGCTCAGTGAGCTGTACGGTTCGACGGTGGTGCTGCGGCAGCTGATGAGCTTTCAGGCGAAGCGCAGGGGCCGGCGCGCGCTGGAGGTGGGTGCTCTTCTCACTAGAATTTTTTGTGAGCTGGAATTAATGCGCGTGTGGTTGAGCTCGAGTGGGTTTCTGTGATCACAGGTGCTGAAGAAGCTGGCTCGCCGACAGATGATGTACCACTCTTACGCGATGCAGGTCCATGGATATGTTACTCCAGGCAATGACGTGGAGCAGGACGATGGATCCTTCATCCTGGTGCACGGGGTTAGAGTTTCTGTCTTTACTTCCTTCAGCTGATTGGGTTAAGATAAATGTGGCAGTATCATTTTCAAGTCTCACAATTGGGGGGGTCTGGATTAATTATGCAGTCCTTTTCATGTCAGGGATGGGTTTAGTACGATTGTACGAATCTGGATGTAACCACCACATCAGGCTTTCTATTTCTTGCAACTAAAACACCTGAAGTTATTCTTGAGTATTTTCACTTGGCCTTTTAAGGAGGTCTAGGTTTCTAATGGCCAGAAAAAAGTACTTTAAGAGGGGCAAAAGTACTCTTTTCCCTGAAACTAATATAGGTACTGTGTTTTTATCGGTTTTTATTTTTGAATTAACTTTTCAGTACCATGGGAGTTACTCTTTGCGCCACTGGTTGCAACTCTCTGATTGGCTTCCAACCTTAGAAGCAACATTAGCGTTGGATGAGGAACAAGTTAGGAGGGTAGGTGATGATTCAGTAGGAGGACCTGCTGTAACCCGGCAGCTACGTCTAATCAGGATATTGATGAGAGACCTTCTGATTGGTGTAAGCTTCAAAGTTTTTAAAGTTTTCACGTATCCTCAGTTACTGGTAGATCTGGACTTGAAGATGCTCATTGATGCAGGTGAATTATCTGCATAGCCATGGGCTAGCACATACTGAGCTTAGATTGGAGAATGTTCATGTAAGCCCAATAGACAAACATGTTAAAGTAAGTAACCTTTTCTTATGTTCTTGTTGACATAAGTGATAAGTTTGTTCTCTCTTTGCTATTATGCCTAGTAGTTTATTTATGGCATTAATAAATATTTGCTGTTTTTAATGCAATATAGCTGAACACTTGAAGATACATTCGTCTTTTAGTGTGAAGCATGATTGTGCACCAGCACGTGGTCACTAGATCTCTGGCATGTCTGAATGATATTTCATAGTTCCAATTTAATATGTTCTCAAAACACAGATATGCTAAAATAACCAAGACTTTAGTTTCACCATGCGGTTTGATGTATGGTTGTATGAACATATAAACTGTGTCATCCTGTTCAGTGTAGTGAGCTGAATCATGCATATGAATGCAATCTCCTAAATGCTAAGAACAGCACTCCAATCTTGTGCATGTTAGCAATTGACCAGTAATGTTTGACTGTTCTTAGTTGAGGTATTAGGTTTTTATGTTAGTATCATCGACTCTCAAGTGCCAGCTTTTGCTGATTATTACAGCTGAAGCTTGGAAGGCCACTGGACACTAAATAATTGCCATGTGAATTGCAGAACTCTCTTTACTCTTTTATGTCTTTCTGCAGTTTTAATTATTGACAAGTGACAAATACACAACTGCATTCTAGAGTCTAGCCAAGCTAGGAGGGTGTCTCTCTGCGAGTTACAATACTCAAAGCTATTTGGCAAATTCAATATATAATTAGAACAAATACTGTATGTAGATGTTGGATTGAGCTAAATTATCAGCATTGTTGAAAAATCATACTGTGATATTTGTCCATGTTTTACATTATTTTGTATTTCGCAGACTTATTTCATATTTACACTGCCCAGTGAATAAATAATCCAGTTTATGGTTAAGAAAAGATTCTTAAATTCATATATAGTAAACAGTTAAATTATCATAAATTTGGTTTGACTAATGGAAATTTCACAAAGGTGTATCACTTTTGTTCAGTGAACAATATTCCCATCATTGAACTATTGGATTAGAAATGCTAGTACCATATGTTTGGCACAATCTCTGTATGACATTGTTTTAAGTATGTTGGTGTACAAAAACGCACTTATATCACTTGCATTCATAACATTAAGCTAGCAAATATTGAATTCAAAATAAACCATAAAGTTAATGTTCAACACTAAGGCCCCGTTCGATCTCCACCTGGAGATAAATTTTTATGGCACGCAAAACGAGAAACCTCATTAGCACATGATTAATTAAGTATTAACTATTATAAATTTGAAAAATAGATTTATTTGTTTTTTAAACAACTTCTATATAGAAACTTTTAAAATAATAGCGTGCTAAAAGAAAACGAGGAAGTTGAAGTTTGGAGTTGAAGAATAGAATAGGGCCTAAGTCAATGCCCAGTAAACCCCTGTGTGTCTGAAAGTTGTCATGTGCATTCCATTTGTCCCTTTATCCTGTTGCTATGTTTTTATGCAACCTCACATGGTTGACCTTTTTCCATGGTTTCTAACTTTTTAGGTTGGTATTCTTGGGAATGCTGTTGATTTTCATGACAATGATCCTAGAAATAGCACATTAGCAAGTAATGATGAAAGGAGAAAAATGATGATTGCATTTGACATGAGGTACTTAAGTGCAAGCTGGAAAATTATATTTGCATTCACTCTACTGTTTTGTAGACAGTGAAGCAGTGCATAAAGATCATGAACTGATATATGCTATAACTTAGAAGTTTGATTTATTTTTTGTTCCTTAGATGTGTTGGCTTTATCATGGCAAAGATGGTTCTGAGAGAGCTAATGGATTCTTCTACTTTCCTAAAATTCAAGTCATTCTTGACAAAGGTGCGTTTTGTGCATCCTTTGCATCCTCTATGTTCCTATCCTTAATGTCGTAAAGGTATAATGTTTGTCAGAATCCAACAAGATAATATAGGTTTGTCGTAAAGGTATATGGTAGTAATAACTAATTAGGGAAATACTATCCTGAGCAAATGAATACTGAATAGTCAACCTAATGAAAAGCCAGAATCCGTTTTACAATCATAGTTATTCCTGTTCAGGATTACTTGCCATATGCTAATACATCTGGTTTTGATTTCTTTGAAGTTTTGAGCAGCTTTAGTGGCAAAACTAAAAAGAATGATTTCCATGATTGGTATCCTCTACTGCAGGGAGATGACCCAGCATGTCTGCGTGAGTTCCTTTTACCTATTCTGTGCCGAAATTCTCCATCCGGGAATATTGGTCTGCAGGTGAAGAATTGTGTTTCTTCTAATTTATTGGCATTCCATTTCTTGGAGCTATCTGATATTCTATTTGTGATTTATGAATTATTTCCTTTTGTTTTAGATGCTTGATCGACAATGGGGTGCTGGTTGGAATCTTTTGGCGTTATTGCTGGCAACAAAACCTGACAAAAGGATAAGGTAAGATTATTCACTGCTGTTAGTACTTCCACAAGCAAAACATTGCAAAATTTGATAAATGTTTGCTATTTATTGGACATCTGAGATTTGCATTTTTATTCTGTTGTTCCAATTAATATGCAGTTGTGTGGATGCATTGAGGCACCCCTTCCTTTGTGGACCTAAATGGCGCATAAATCCATCAGTTGATGTCATACGGTGGGGCTTGGGTTCTACTGCTGTCCGCATGGCTGAAGATTATATTTATGGACAGCATCAGGTATTAACTCTATGCACATGTATTAATCAAGCTGCATACCATGTTCTCATCTATAAATCTTGTTTAAAGGCTTGAGCTTCCACCCACTTAGAAACTGGCATATTTTTAATGAAGCTTACATTTTAACAATCAAACTTCTACTTTGTATCATCTGATAGCTCCTAATTTTCATGAGGACTTGTGGTGGCACCCCAAGGTACTCATAAAGTTCGTTTTTCCATGTTTACAGCGTAGACGATTAGCATATTTTGTTGAATTGATGGAGGTGCTAAACCCTAATCCAAGAACAGAGGTAACTTCGTCCTGTTCCAAGTCCTGATAAAAAGAATCCAGTGTGATTGAACTTTGTTTTGAGATGATTGTGTAGCTGAGTTTCTTTTTCTTTTGCTATGACAGCTGAAATTAATTGTTTCCATATCTTGAATTCAATTATTGTTAGCGTTGATGCTATGAATTCACTTGATCTTTCTGTCTATGGTGTCATCAATATTAGGTGGAAAGATATAATATCTTTTGTATTTCCTATTTTGTTTGTTGCAGGATAGATATGGTTCTTATTGTCAGTCCATTTTCAGAACATATATTTTCTTATTCTTTTCAAGTTCATGTTCTTCTCTTCCAAAACATAATATATTTTAATTTCCTTTTGCTTTTATTCACTCAGAACTGGCTTAACATCCTACCTGGTCACTGGCGTCTCTTATACTGTACTGGAAGGCACATCGGTCTAACACTTCGTCAGCCTTCTCCGAGAATCCTCATCACTGATGTGTTTCTCACATTTGCACAAACTTCAGACTCCATTGATCCTGTGTTCTCTCTGACCTCAGACATTGGTTTCAAAATTATGGCAGAATCTGATTGGCCTCATGACAAATCTGGTAGCGAAGGAACATTATCTGTTACCTCATCTGCGAGGATAGCAACTGGAAGAATTTATATTCACGAACAGGATGGTGATGATAGTAGGGTTGCATCTTCAAGATCTTCTAGGAGATACCTTCGTGGTAAGTGGAGAAAAGTTTCAAAAATGAAAGAGCTGCCTGCTAGCCTCCCCACAGTAAACATTACCATGGATGAACTCGACGTATCAATGAGCTGCAGCTCGACTTTAAATGTCAGTTCTGCGCAGAAGGTGCTGCAAGAGATCCGCACTCAGACCCCGCCAGAAATGTTTGATTTATCAAAAATTGTTTGTGGGACATACGTTGATGCAAGGTTGATGATTCTTCGTGGTGTTAACGGGTCCGCGTTATTTTTCACCAGATCAAATTCTAGAGCTGATTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004137

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004137&oldid=41861"