BGIOSGA004162

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Revision as of 11:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004162| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004162, complete gene.| tag = OS01G06...")
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Gene Name

BGIOSGA004162

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004162, complete gene.

LocusTag

OS01G0665200

Ensembl Transcript ID

BGIOSGA004162-TA

Ensembl Protein ID

BGIOSGA004162-PA

Length

5618

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30410134..30415751

Sequence Coding Region

30410134..30410184,30411470..30411878,30412477..30412604,30412716..30412775,30413938..30414087
,30414170..30414325,30414455..30414666,30414795..30414896,30415163..30415242
,30415327..30415751

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30410134..30415751 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30410134..30415751 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGCAGACGATGCAGACGGAGCAGCAGCAGCAGCAGCGGAGGAAGGGTTCGCCAGAGATGGATTTCTTCAGCGAATATGGTGATGCTAACAGATACAAAATACAGGAAGTCATTGGCAAAGGAAGCTATGGTGTAGTTTGTTCAGCTATTGACCAACATACTGGCGACAAGGTTGCAATCAAGAAAATACACAATATCTTTGAGCACTTATCTGATGCTGCCCGAATCCTCCGTGAGATCAAATTACTCCGGCTATTACGGCATCCTGATATAGTTGAGATCAAGCATATAATGCTACCTCCATCAAGGAGGGACTTCAAGGACATATATGTTGTCTTTGAGCTGATGGATACCGATCTCCACCAAGTCATCAAGGCAAATGATGACTTAACCAAAGAACATCATCAGTTCTTTCTTTATCAGATGCTTCGTGCTTTGAAATATATTCATACTGCTAATGTCTATCATCGTGATTTGAAGCCAAAGAACATATTGGCAAACGCTAACTGTAAACTCAAAATATGCGATTTCGGTCTAGCACGAGTGGCATTTAATGACACTCCTACAACGGTATTCTGGACGGATTATGTTGCTACTAGATGGTATAGGGCTCCTGAGTTGTGTGGTTCTTTCTTTACTAAGTATTCACCAGCTATTGACATATGGAGTATTGGCTGCATTTTTGCTGAGATTTTAACTGGGAAGCCTTTGTTTCCTGGTAAAAATGTGGTTCACCAGTTGGATCTGATGACTGATCTCTTGGGTACTCCATCAATGGATACTGTTACAAGGATTCGGAATGAGAAAGCAAGGAGGTACTTGAGCAGTATGAGGAAAAAGCAGCCAGTACCTTTTTCTGAGAGATTCCCAAAAGCAGATCCTGCTGCACTCAAACTTCTGCAGAGGCTTTTAGCATTCGACCCGAAGGATAGACCAACTGCCGAAGAGGCGTTGGCTGATCCATATTTTAAAGGCCTTGCGAAAGCAGAGAGAGAACCATCATGCCAGCCAATAACAAAGATGGAGTTTGAGTTTGAGCGGAGAAAGGTGACTAAAGAGGATGTGAAGGAACTTATATTCCGTGAAATACTGGAGTATCATCCTCAACTTCTTAAGGATTACATGAATGGAACCGAAAAAACAAACTTCCTATATCCTAGTGCCCTTGACAACTTTCGGAGACAATTTGCTAACCTGGAAGAAAATGGAGGGAAGAATGGAGATGCTGTTCCATCAGACAGGAAACATGTTTCGCTCCCAAGGACTACTACAGTTCATTCTGCTCCAATTCCTCCCAAAGATCATCAAAATATAACTTCCCAAGTACCCCAAAGGATTCCAGGTAGAACAGGACGAGGGGCTTGCCCTGTAATACCATTTGAGAATTTGAGTGCAATGGGCCCATACAATCAACGAAGGGTGGTAAGGAATCCAGTGCTTCCTCCAGCCACCACCAACCTATCAGCATATGCCTACCACCGTAAATCGGATAGCTCAGAAAGAGAGCTCCAGCAGGAGCTTGAGAAAGATCGCATGCGGTACCAGCCATCAGAGCATTTCATGGATGCTAAGGTGGTGTCACATATGTCCCATGATTTGAGAGCTTCCTCTTACTACGTTTCAAAGGCGAAATCTGATGTAGCAGACAGAGCTGCCTTACAATCCAACATGATGCAGGGAATTGGCCCTTTTAATGGCATTGCTGCAGTTGGAGGTAACTACAATAAAGTCAGTACTGTTCAGTATGGGGTCTCGAGGATGTATTAG</cdnaseq>

Protein Sequence

<aaseq>MAMQTMQTEQQQQQRRKGSPEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIKANDDLTKEHHQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFFTKYSPAIDIWSIGCIFAEILTGKPLFPGKNVVHQLDLMTDLLGTPSMDTVTRIRNEKARRYLSSMRKKQPVPFSERFPKADPAALKLLQRLLAFDPKDRPTAEEALADPYFKGLAKAEREPSCQPITKMEFEFERRKVTKEDVKELIFREILEYHPQLLKDYMNGTEKTNFLYPSALDNFRRQFANLEENGGKNGDAVPSDRKHVSLPRTTTVHSAPIPPKDHQNITSQVPQRIPGRTGRGACPVIPFENLSAMGPYNQRRVVRNPVLPPATTNLSAYAYHRKSDSSERELQQELEKDRMRYQPSEHFMDAKVVSHMSHDLRASSYYVSKAKSDVADRAALQSNMMQGIGPFNGIAAVGGNYNKVSTVQYGVSRMY</aaseq>

Gene Sequence

<dnaseqindica>1..51#1337..1745#2344..2471#2583..2642#3805..3954#4037..4192#4322..4533#4662..4763#5030..5109#5194..5618#ATGGCGATGCAGACGATGCAGACGGAGCAGCAGCAGCAGCAGCGGAGGAAGGTGAGAGGAGGTGGCAATTCATTTTTTGTTGCGCGGTGTTTCTCGCCGGGGGTGGTTGGGTTTTTGGTGGAGGGTGGTGGTCTCATGGTCATGGGTGGTTGGCGTTTGGAGATCGGTTTGGTCGTCCCGCGGGTCGAGACGATCTTGAGTTATATGGAGTCGGGGGATTTTGTGCAAAAGAACGATTTGTTTCCCTTCCTTTCTTTCTCGTGGAACTTCGGATTCGGATGCGTACGAGCGTAGTAAGGGTTTGTTCTTGCCGTTGTTTTCCTCCGCTTTTTTGCTCGACTTTTATCTGCGGATGACTCCGTATGTTGGATTGTGGTGAATTTCAGTGGATTTTGAGCTCTGCAGTCGCTGTAGTTCTCGATTCTCATGTTCCATTTGTTCGCAAAAGAGATTTTCCCCCCCCTCCCCTTCGCCTTTCTCTGGATCGGAAATTATCCGAATTGTCAGAAGGTTCTCTATTCGATTTAACCGTGGATGCCTTCTTGATAATATCTGAAACCTTCTGGTGCTGGGCGACGTCTGCTTTTTGTGCCCTCGAAAGGAAATGACATCCTTTGACAACTTTTCCCGAGTCAGTCGAATACTCATTGCGCCTTGATGAATAACTAGTACTCCAATTCAGAGAATTTTCCCACCCCACTTCTAATCCGAGATAACACTCCAAGGAGAGAAGATTAATTCAGATGCTACTTAGAAGCATCACAAATGCGGTATAAGATTCGCTGAGTAGATATGTTTATCCTAAGCCAGCTCTGCGGCCTTTCTTACCTTCTTGGTTTTTTTTACTTGCAAGAAAAGAATAGCCAATCATTTTAATTGTCCCAGTGGATTATCTAATCAATATATTCCATGCCCACTTTGGAGGCATATTGATCGAGATGGTTTTATGCCCCAGAGGCCAAGAGCACTTCTTAAGAGTCATTATTTGGCTTTTTTTTAGTCTTGTTCGGTCTTAGGCTTTGATTGTTTCGTTTTGCTCATTGCTGGAGAGTGGAGACTAAGGAGTCTTGGCATCAGAAGGGCAGGTGTAGCTACTGTCTTTTCTGATACATCAGCTACTAGAGTCCAGTTGCTCGTTCTAGGATCTATCTGAGTTTGTTGAACTAGGATCTGTCTGAATTTGTTGTACGCAGATTAACCATCTGCTGTTTCAGTGGTCTGTTAGCAAGTACTCTTCTATGCATTCAAAGACATTAGCTTTGAATTATATACTCCCTCTTTTTTAAACAAGCTATCTCCAGCATAGTGTTAACTCAATTTATTGACTTATGTTCAGGGTTCGCCAGAGATGGATTTCTTCAGCGAATATGGTGATGCTAACAGATACAAAATACAGGAAGTCATTGGCAAAGGAAGCTATGGTGTAGTTTGTTCAGCTATTGACCAACATACTGGCGACAAGGTTGCAATCAAGAAAATACACAATATCTTTGAGCACTTATCTGATGCTGCCCGAATCCTCCGTGAGATCAAATTACTCCGGCTATTACGGCATCCTGATATAGTTGAGATCAAGCATATAATGCTACCTCCATCAAGGAGGGACTTCAAGGACATATATGTTGTCTTTGAGCTGATGGATACCGATCTCCACCAAGTCATCAAGGCAAATGATGACTTAACCAAAGAACATCATCAGTTCTTTCTTTATCAGATGCTTCGTGCTTTGAAATATATTCATACTGGTATGCTTCCTTTTAGAAACTGAGGTCTGAGCTAGCACAGCGTTTATTGATGACTGTAATATTTGTTTAGTGTTGAGGGATAATTTATTCTCTGAAATGTTGGGTAAAGTTTATTCACATTTTTTTGGGTTCTTTGTTATGCTTCATGAAGAGCATAAACGATCTTGTAGTGTGCTCGCACATGAATTTGGCACAGTGCTAGCCCAATAAATAAGTCCACTATAAATAAAGGAAATTGTCATTCCCACATCATTTGCCTTTAGTTGCTTATTCTGTTCATTACATTATTTTTGCCCTGTGGAGATTCTGTTTGTTGCCATCCTCTTATTTCTTTAAAGTATTTCCCACTATTTTGCATCTTTTATTGATTACTAGATACTATACTTGCACTTTCTTTGTCTATCTAGAAATTGACTAATTGTACAACATGTCATCATTACTGTTTTCTGCTATTCACTGTTAAGCCATTAACATTATCACCACTGAAAATCCTTCTCGTCGAGTTTTAAACTGCATGCTCATTTAGATCTTTCAGAATGGGGAGATGCACTTGGTTTACATGTATTGCTTATCCTAACCATCAGTTTATGTACTGCAGCTAATGTCTATCATCGTGATTTGAAGCCAAAGAACATATTGGCAAACGCTAACTGTAAACTCAAAATATGCGATTTCGGTCTAGCACGAGTGGCATTTAATGACACTCCTACAACGGTATTCTGGACGGTGTGTGACATTGTACATTCATATATTGCATTATCTGCAATAGTACATGCATAGTTTTGCTACGTAAGTTTTATTTTCTATTTCATAATTTTCTTTCTTTGTTTTTTGCAGGATTATGTTGCTACTAGATGGTATAGGGCTCCTGAGTTGTGTGGTTCTTTCTTTACTAAGGTAATTAATCTGCAGTTCTCATGTGTTGTTTGTTGGAATATTTGCTTGGGCTACTTCCCCAGAAGCCCTATAACATGATTTGCTTGGTCTACTTGATGGTATATTGCTGAATTATATTTTCTGTTAAAATTCATTGTCACATCCCTATACATGATTTTGCTATGGTTTTCTGCATGCTCTTCTGACTGTACACATTTTATCATAGAGAAATGTAATATTTTTATATCATAAAGACATAATATTTCAATTTAACTAGTGTAATACATTGAGTGTTATGCCAATAGAATGATAATGGCAGCTATTCTAGAGCCTAGTATTCATGGCCACACACACTATACTGGTGGTATGCCAACATGCTGGTATACAATAGTTGTCACTTGTCAATCTGTGGCCCTTCCTTGATATGCAGCCATTTATGTCAGTCATAGCAACTACTGTTGATGCTAAGTGGACTTCCTAATATTTAGCAATCACAATTCGAATTAACTAGTGTTACATATCGTCATAAATCATACTTCACATTTTGTGGCCTCTTTCCCATTCCTCCAAGCCTTCATTTGGATCTTTGACAACGATCGTGTGACTATATTCTGTTTTATGATGTCTGGCTCAATTTTACTTTATCTTGATTAATCGGGTGACTTGATTCCAAGCTCCCTACAGATATGCACATGTTACTGTTTAGAAACTTCATATGCGGTCATTTTTTATTTTCCTGAAAGATTAATGTCTATGTGTTAAATTTATCCTGTTGTACATAACCCTTTTTATGCACAAGTACCCCCATAGCTATATGTGATTTTACATCAGGCCATTCATCCCCTTTGATTCCGATTTGGCTTTTTACCAGCTGGTATAACAGGGATCATTCCTTCCAAATTGTCTTGTTCAGAAGCTGCATTCATAGGCGGCATTTGCTACCTTTTTTAGTAGGTATTGCCTTCATTGATCATCATAGATAGTTTTATTAGTATTATTTGGTTAGGTTTGAAAAGTACAGCATTTACAGTAACCTGAGAGTTTATTCGTCTGTTTGACATCTAGGCGAAGTGATAGGGTTAATGTAGTTAGCTGATATTTTCTTCACTTTTACGCCAACTGTTCAACTAATATCTGCTCCTCTGTAAATTTCAATGGATGCTAAATCGATTGTACTGTGCAGTATTCACCAGCTATTGACATATGGAGTATTGGCTGCATTTTTGCTGAGATTTTAACTGGGAAGCCTTTGTTTCCTGGTAAAAATGTGGTTCACCAGTTGGATCTGATGACTGATCTCTTGGGTACTCCATCAATGGATACTGTTACAAGGGTATGCTTTGCCTTTCATCAATGACTAATGCTCCAAAGTGAACTATCCATAATAAATGCCAGGTATCATGTTGTAACTGCAGATTCGGAATGAGAAAGCAAGGAGGTACTTGAGCAGTATGAGGAAAAAGCAGCCAGTACCTTTTTCTGAGAGATTCCCAAAAGCAGATCCTGCTGCACTCAAACTTCTGCAGAGGCTTTTAGCATTCGACCCGAAGGATAGACCAACTGCCGAAGAGGTTAGTTTTTATTAATGAATGTCGAATTAAAACTTCTGTAGTTTGTACTTCCATGTGATGGCTGCACCTGGTGTCATTTGGTGCTGAAATCATTCTAATGATATTCATTTTCATTGATTTACATATCAGGCGTTGGCTGATCCATATTTTAAAGGCCTTGCGAAAGCAGAGAGAGAACCATCATGCCAGCCAATAACAAAGATGGAGTTTGAGTTTGAGCGGAGAAAGGTGACTAAAGAGGATGTGAAGGAACTTATATTCCGTGAAATACTGGAGTATCATCCTCAACTTCTTAAGGATTACATGAATGGAACCGAAAAAACAAACTTCCTATATCCTAGGTTCGTCCCATGGATTCTCTTCCATCAGTCATGCTCCCCACCTCCTTTCTTTTTGTTTATTCCCATCTTCTGCACCCCATTGGTTATAACTAATACATTTTCGGTTGCACCTAATTGTTATTACACAGTGCCCTTGACAACTTTCGGAGACAATTTGCTAACCTGGAAGAAAATGGAGGGAAGAATGGAGATGCTGTTCCATCAGACAGGAAACATGTTTCGCTCCCAAGGTGGCTAAAACCGTTTTAACCATCAATGGTTTTCTTCCCATTGAAAGTATATTTTTGTTGATTATGATGCCGAGTTTGCTTCTGTTAAGAAAATTGCATCAAATCAAACAGATAGATCGTACTTGCATCATTATAAAACTTTGTTTCATGATTTTATGGTACTATAAAACCTCTGTACACATCAGAAAGTGGGTGATTTGAGGCGATATCAATAACAGAGACCACCGTTGGAATATTGGTGCTGACCTTTAATTTCTAATTTGCAGGACTACTACAGTTCATTCTGCTCCAATTCCTCCCAAAGATCATCAAAATATAACTTCCCAAGTACCCCAAAGGATTCCAGGTAATAGTTTCTCCTAAATAAATTTATCAAGCTCATTTCTTCAGAGGATTCCATCTGATATATTTTCTTCTGATAATTTCTCAGGTAGAACAGGACGAGGGGCTTGCCCTGTAATACCATTTGAGAATTTGAGTGCAATGGGCCCATACAATCAACGAAGGGTGGTAAGGAATCCAGTGCTTCCTCCAGCCACCACCAACCTATCAGCATATGCCTACCACCGTAAATCGGATAGCTCAGAAAGAGAGCTCCAGCAGGAGCTTGAGAAAGATCGCATGCGGTACCAGCCATCAGAGCATTTCATGGATGCTAAGGTGGTGTCACATATGTCCCATGATTTGAGAGCTTCCTCTTACTACGTTTCAAAGGCGAAATCTGATGTAGCAGACAGAGCTGCCTTACAATCCAACATGATGCAGGGAATTGGCCCTTTTAATGGCATTGCTGCAGTTGGAGGTAACTACAATAAAGTCAGTACTGTTCAGTATGGGGTCTCGAGGATGTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004162