BGIOSGA004175

From RiceWiki
Revision as of 11:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004175| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004175, complete gene.| tag = OsI_032...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004175

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004175, complete gene.

LocusTag

OsI_03207

Ensembl Transcript ID

BGIOSGA004175-TA

Ensembl Protein ID

BGIOSGA004175-PA

Length

2915

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30710420..30713334

Sequence Coding Region

30710420..30710454,30711031..30711848,30712082..30713334

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30710420..30713334 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30710420..30713334 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGTATCGCGGCTCTAGCCAACCGCCAAAGTGTACTGCCATTCTCATATGCTTCACCCCTGTTGATGCTAAGCACCGGCTCATCCTTATTTGTTGAAGAGCATAAGCAAACCTTCCTTACCTCACCAAACGCCGATTTCTCTTGTGGCTTCTATGAAGTTGGAGGGAATGCTTTCTCCTTCTCCATCTGGTTCACCAACAGCAAGAATAGGACCGTCGTATGGTCTGCAAACCCCAAGTCCCCGGTAAATGGCCATGGCTCTAAGGTGACACTGAACCATGAAGGTAACCTGGTCCTCGCTGATGTCAATGGCACCGCAAATTGGGACAGCAAGACGAGCTCTGGCAAGGGCACAACGGCTGTCCTTCTTGACACTGGCAATCTCGTCATCAGAGACTCCACAGGCACGAAGTTATGGCAAAGCTTCTGGGCACCAACGGATACCTTGCTTCCATTACAGCCTCTCACCAAAGGTACAAGACTGGTCTCTGGTTATTTCAACCTCTATTTTGACAATGACAATGTGTTACGCCTCATGTATGATGGGCCAGAAATATCTAGCATCTATTGGCCAAGTCCAGACTACTCAGTGTTTGATATTGGGAGGACTAGCTACAATGGCTCCAGGAATGCAATCCTTGACACTGAAGGACACTTCCTCTCAAGTGATAAGCTGGATATCAAGGCTGCTGATTGGGGTGCTGGAATCAACAGAAGGCTGACGCTTGATTATGATGGGAATCTAAGAATGTATAGTTTGAATGCATCAGATGGGAGCTGGAAAGTCTCATGGCAGGCTATAGCAAAATTGTGTGATGTGCATGGACTGTGTGGCGAGAATGGTATATCAGTCACGTATAAGACAGGGTCTGGAACTTGTTACATCAAATATGTACTCTTCAATGGCTACAGCTCCACAAATTTTCCGGGTGATAACTACATCAAACTACCCAAGAATATGGTTTCCAAACAGTCCGATCTCTCATGCAACCCAACCAAAGAGATTGTACTAGGATCTTCAAGTATGTATGGAATGAATGATGCAAATAAAAATTATGCAACCTATTATGTGTTTGCAGCAGTATTGGGAGCTCTAGTGCTAATCTTCCCCGGTACAAGCTGGTGGTTTCTTTACAGCAAGCACAACATACCCATGTCAATGGAGGCAGGCTACAGGATGGTAACAAGCCAATTCAGGATGTTCACGTACCGAGAATTAAGGGAGGCAACTGGAAAGTTCAAGGAAGAGATTGGAAGAGGAGCCTCTGGTATTGTTTACAGAGGAGTACTTGAAGATAAGAGAGTGATAGCCGTGAAGAGGCTAATGAATATTTCACATGGTGAGGAGGAATTCTGGGCAGAAATGAGTATTATTGGAAGGATCAATCACATGAACTTAGTTAGGATGTGGGGTTTTTGCTCCGAGGGTCAACAAAAACTACTGGTGTATGAGTATGTGGACAATGAATCACTGGACAAGTATCTATTTGGTGATGTAAGTGCTGAGCGATTGCTTGCATGGAGCCAACGGTTCAAAATAGCGTTGGGTACAGCTAGAGGTTTGGCCTATCTCCATCACGAGTGCCTAGAGTGGGTTGTCCATTGTGATGTAAAACCAGAGAACATACTTCTGACCAGAGATTTTGAAGTGAAGATAGCAGACTTTGGACTGGCCAAACTCTCAAAGAGAGACAGTACCAGTTTAAACTTCACGCATATGAGGGGTACAATGGGCTACATGGCACCAGAATGGGCGTTGAACTCACCAATCAATGCAAAGGTTGATGTCTACAGTTATGGTGTTGTTCTTCTTGAGATTGTAACTGGAAGCAGGATATCAAGCGGGATAAAAGTGGATGGGAGGGAGGTGGAGCTCAGAGATTTTGTGCAGGTCATGAAACATATTCTGGCTACTGGGGACGTCAAGGATGTAATTGATACTAGACTGAATGGGCATTTCAATTCTGAGCAAGCAAAGGTAATGGTGGAAGTTGCTATATCTTGTCTTGAAGAAAGAAACAGCAGGCCTACAATGGATGAAATTGCAAAAGCCTTCCTGGCATGTGATGACGAAGACAATCACCCAGCCTACTCATGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGIAALANRQSVLPFSYASPLLMLSTGSSLFVEEHKQTFLTSPNADFSCGFYEVGGNAFSFSIWFTNSKNRTVVWSANPKSPVNGHGSKVTLNHEGNLVLADVNGTANWDSKTSSGKGTTAVLLDTGNLVIRDSTGTKLWQSFWAPTDTLLPLQPLTKGTRLVSGYFNLYFDNDNVLRLMYDGPEISSIYWPSPDYSVFDIGRTSYNGSRNAILDTEGHFLSSDKLDIKAADWGAGINRRLTLDYDGNLRMYSLNASDGSWKVSWQAIAKLCDVHGLCGENGISVTYKTGSGTCYIKYVLFNGYSSTNFPGDNYIKLPKNMVSKQSDLSCNPTKEIVLGSSSMYGMNDANKNYATYYVFAAVLGALVLIFPGTSWWFLYSKHNIPMSMEAGYRMVTSQFRMFTYRELREATGKFKEEIGRGASGIVYRGVLEDKRVIAVKRLMNISHGEEEFWAEMSIIGRINHMNLVRMWGFCSEGQQKLLVYEYVDNESLDKYLFGDVSAERLLAWSQRFKIALGTARGLAYLHHECLEWVVHCDVKPENILLTRDFEVKIADFGLAKLSKRDSTSLNFTHMRGTMGYMAPEWALNSPINAKVDVYSYGVVLLEIVTGSRISSGIKVDGREVELRDFVQVMKHILATGDVKDVIDTRLNGHFNSEQAKVMVEVAISCLEERNSRPTMDEIAKAFLACDDEDNHPAYSW</aaseq>

Gene Sequence

<dnaseqindica>1..35#612..1429#1663..2915#ATGGCCGGTATCGCGGCTCTAGCCAACCGCCAAAGGTCTGCTTCGCCCGTCATGGCCCTAGCAATTTCCGCCCATGTCCTACTCTTTTGGTTGAAGACCCGATGGTTTCTTTCTTTCCAAATCGTCCACGCCAAACAGAATGTTGGTATTGAGAAATAATGAGGCAGCTCTCAAAAATGTGAAAGCTGTCATGAAGATTGTATGACCAAGACAAGAAACATGTCAAATATTTAAGCTGCACGATTAGAGAATGATGGTAAAAACAAAAGTTCAGACCTTCTAAAATTAGAGAGCTTTAAAAGCAGTAATATATTCAATCACTTTCATATACCTGAAAGCCGCCAGGACCTGACATGCAATGCGAACAATAGTCCTGTAAGGAGCACTTAATCTATATCCCGGTTTACTGGTTTAGGCATGTAGAATTTGCAGCATGGATTCAAATTTGACTCCACGAAAGAACCTTTGCAACAAGTGGATATCAAATAAGGATGAGGCAGAGCATCATAAATGGAAGCAAACACCTTCCTCCATACCATGATCTGATGGCCTGAACACAAAGAAAACAAAATGGCAAGATTACTCTGTCTAGTCATTCTTCCCTTGATCAGTGTACTGCCATTCTCATATGCTTCACCCCTGTTGATGCTAAGCACCGGCTCATCCTTATTTGTTGAAGAGCATAAGCAAACCTTCCTTACCTCACCAAACGCCGATTTCTCTTGTGGCTTCTATGAAGTTGGAGGGAATGCTTTCTCCTTCTCCATCTGGTTCACCAACAGCAAGAATAGGACCGTCGTATGGTCTGCAAACCCCAAGTCCCCGGTAAATGGCCATGGCTCTAAGGTGACACTGAACCATGAAGGTAACCTGGTCCTCGCTGATGTCAATGGCACCGCAAATTGGGACAGCAAGACGAGCTCTGGCAAGGGCACAACGGCTGTCCTTCTTGACACTGGCAATCTCGTCATCAGAGACTCCACAGGCACGAAGTTATGGCAAAGCTTCTGGGCACCAACGGATACCTTGCTTCCATTACAGCCTCTCACCAAAGGTACAAGACTGGTCTCTGGTTATTTCAACCTCTATTTTGACAATGACAATGTGTTACGCCTCATGTATGATGGGCCAGAAATATCTAGCATCTATTGGCCAAGTCCAGACTACTCAGTGTTTGATATTGGGAGGACTAGCTACAATGGCTCCAGGAATGCAATCCTTGACACTGAAGGACACTTCCTCTCAAGTGATAAGCTGGATATCAAGGCTGCTGATTGGGGTGCTGGAATCAACAGAAGGCTGACGCTTGATTATGATGGGAATCTAAGAATGTATAGTTTGAATGCATCAGATGGGAGCTGGAAAGTCTCATGGCAGGCTATAGCAAAATTGTGTGATGTGCATGGACTGTGTGGCGAGAATGGTATATGTGAGTTCTTGCCAAGCTTCAAGTGTTCTTGTCCCCCTGGATATGAGATGAGAGATCCAACAAACTGGAGCAGAGGTTGTCGTCCACTATTCAGCAAAACTGCAGCAAAATAGAAGAATATGAGTTCTTCAAGCTCGCTCAAACCGACTTTTATGGCTTCGATCTAATCATCAACCAATCCATCTCACTTAAAGAATGTAAAAAGACTTGCTTGGACATCTGCTCCTGCTCAGCAGTCACGTATAAGACAGGGTCTGGAACTTGTTACATCAAATATGTACTCTTCAATGGCTACAGCTCCACAAATTTTCCGGGTGATAACTACATCAAACTACCCAAGAATATGGTTTCCAAACAGTCCGATCTCTCATGCAACCCAACCAAAGAGATTGTACTAGGATCTTCAAGTATGTATGGAATGAATGATGCAAATAAAAATTATGCAACCTATTATGTGTTTGCAGCAGTATTGGGAGCTCTAGTGCTAATCTTCCCCGGTACAAGCTGGTGGTTTCTTTACAGCAAGCACAACATACCCATGTCAATGGAGGCAGGCTACAGGATGGTAACAAGCCAATTCAGGATGTTCACGTACCGAGAATTAAGGGAGGCAACTGGAAAGTTCAAGGAAGAGATTGGAAGAGGAGCCTCTGGTATTGTTTACAGAGGAGTACTTGAAGATAAGAGAGTGATAGCCGTGAAGAGGCTAATGAATATTTCACATGGTGAGGAGGAATTCTGGGCAGAAATGAGTATTATTGGAAGGATCAATCACATGAACTTAGTTAGGATGTGGGGTTTTTGCTCCGAGGGTCAACAAAAACTACTGGTGTATGAGTATGTGGACAATGAATCACTGGACAAGTATCTATTTGGTGATGTAAGTGCTGAGCGATTGCTTGCATGGAGCCAACGGTTCAAAATAGCGTTGGGTACAGCTAGAGGTTTGGCCTATCTCCATCACGAGTGCCTAGAGTGGGTTGTCCATTGTGATGTAAAACCAGAGAACATACTTCTGACCAGAGATTTTGAAGTGAAGATAGCAGACTTTGGACTGGCCAAACTCTCAAAGAGAGACAGTACCAGTTTAAACTTCACGCATATGAGGGGTACAATGGGCTACATGGCACCAGAATGGGCGTTGAACTCACCAATCAATGCAAAGGTTGATGTCTACAGTTATGGTGTTGTTCTTCTTGAGATTGTAACTGGAAGCAGGATATCAAGCGGGATAAAAGTGGATGGGAGGGAGGTGGAGCTCAGAGATTTTGTGCAGGTCATGAAACATATTCTGGCTACTGGGGACGTCAAGGATGTAATTGATACTAGACTGAATGGGCATTTCAATTCTGAGCAAGCAAAGGTAATGGTGGAAGTTGCTATATCTTGTCTTGAAGAAAGAAACAGCAGGCCTACAATGGATGAAATTGCAAAAGCCTTCCTGGCATGTGATGACGAAGACAATCACCCAGCCTACTCATGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004175

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004175&oldid=41899"