BGIOSGA004182

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Revision as of 11:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004182| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004182, complete gene.| tag = OsI_032...")
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Gene Name

BGIOSGA004182

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004182, complete gene.

LocusTag

OsI_03224

Ensembl Transcript ID

BGIOSGA004182-TA

Ensembl Protein ID

BGIOSGA004182-PA

Length

5249

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30890199..30895447

Sequence Coding Region

30890199..30890631,30891043..30891125,30891252..30891308,30891860..30891955,30892265..30892335
,30892424..30892466,30892583..30892663,30892765..30892834,30893098..30893162
,30893437..30893534,30893873..30893921,30894012..30894056,30894923..30895447

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30890199..30895447 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30890199..30895447 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCCGAAGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCCGGAGGAGGAGGAGTACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGCCTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAACGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCTCGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCCTGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTCGGAGCGCGCGTGGTTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAAAGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGAACAATCTTCACGAACAGCTGCTGTGAAAGCTGTCTCCAATGTGGAGGTCTTCGGATCTTTTAGAACAGGGCTGTTTTTACCAACAAGTGATATCGATGTTGTAATATTTGACTCCAGGGTTAAGACTCCACAAGTTGGCCTGTATGCTCTTGCAAAAGCATTGTCTCAGAAAGGGGTTGCTAAAAAGATACAGGTAATAGCAAAGGCCCGTGTGCCAATTGTGAAGTTCGTGGAGAGAAAAAGTGAAATAGCTTTTGACATAAGTTTTGACATGGATGGTGGACCACAAGCAGCAGACTTCATCAAGGATTATGTGAAGAAGTTTCCTGCTTTAAGACATCTGTGTATGATTCTGAAAGTTTTTTTACACCAAAGAGAGCTTAATGAGGTCTATACGGGTGGAATTGGTTCATATGCTCTTCTCACTATGCTCATCACACATTTACAGGTAAAGCTGATTGGTCTGGGGAGGCAAGATATACTGGGGTATCGTAAAAAGGAGCACAATTTGGGGATTCTTTTGATCGCATTTTTTGATTTTTATGGACGCAAGTTGAACAATTGGGATGTTGGAATATCCTGCAATTCTGCTAGGACCTTTTTCTTGAAGACTGATAAAAACTTTGCAAATCCTGATCGAGCATACCTTCTAGCTATTCAAGATCCTATGGTACCAGATAATGATATTGGGAAGAACTCATTTAACTATTTCAAGGTGAAATCAGCATTTTCAAAGGCTTATTCTGTGTTAACCGATGCGAACTTGATAACAAGCTTGGGGCCCAATAGGAGCATTCTGGGTACCATTGTCAGACCAGACTCCGTGCTCCTAGACCGGAAAGGCTGGAACAAGGACGCTACAATACCTGACATGTTAACAGAACCCTGGGAACCATTACCCCGTCAGTTTGATAGCGATAATGATGCAGTCTATAATTGGCATGTGATAGATGATGAACCACTGCCCAGGAATACTCGATCCTCATCGGAGGACACAAGTCCATCACCTACACAAAAAAGGAAGTCTTCCAAACCAAAACAGAGATCGCGGAAAAAGGCCAAGGCTGATTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGACAGATTTACAAATACCCTCCCACAGTATACTCAGCACATTAGTAGGTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MEAEAGGVAIVYDALPGLTLAFSPEEEEYLEGATADLGGASTSASAAVVEEVEDATAAYSVFRNEITAAGDALVDIPAADFFSLDVSAAVEDEPATPRALSPQPAPEATLSGSLAPAEQPAQGSERAWFRGGRRFRSPMLQLHKEILDFCDFISPSAEEQSSRTAAVKAVSNVEVFGSFRTGLFLPTSDIDVVIFDSRVKTPQVGLYALAKALSQKGVAKKIQVIAKARVPIVKFVERKSEIAFDISFDMDGGPQAADFIKDYVKKFPALRHLCMILKVFLHQRELNEVYTGGIGSYALLTMLITHLQVKLIGLGRQDILGYRKKEHNLGILLIAFFDFYGRKLNNWDVGISCNSARTFFLKTDKNFANPDRAYLLAIQDPMVPDNDIGKNSFNYFKVKSAFSKAYSVLTDANLITSLGPNRSILGTIVRPDSVLLDRKGWNKDATIPDMLTEPWEPLPRQFDSDNDAVYNWHVIDDEPLPRNTRSSSEDTSPSPTQKRKSSKPKQRSRKKAKADSSSGNNAENGFKRGKGLAQCDRSHQSAGSSRRSKGPREYDRFTNTLPQYTQHISRW</aaseq>

Gene Sequence

<dnaseqindica>1..433#845..927#1054..1110#1662..1757#2067..2137#2226..2268#2385..2465#2567..2636#2900..2964#3239..3336#3675..3723#3814..3858#4725..5249#ATGGAGGCCGAAGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCCGGAGGAGGAGGAGTACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGCCTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAACGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCTCGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCCTGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTCGGAGCGCGCGTGGTTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAAAGGTGGGGATAATTTGGGCTTTGCCATTTGTTAGTTTGAATGTTGGAAAAGAACACGATTTGTAAATTGATTTGATCAGCTTAGAGATAGTTCAATTCGAATTTTAGCTTGGGTAGGCAATGGACTTGTTTCAATGGGCACAGATTATGCGAATAGTTTGGAACTGATTTTAGTTTGGTTCTGAAATCTTCTCAGTTCAGCCTAGGTGGAGATTGATGTTTTTTTAATTGTATTTTGATATCAAGCTACTCGCGATATGCTCTTTCATAACACTCTTGAAGTGTTGCCTGGAAACTATGGTGTTATAAACTTGGGAGTGTCCACATGGTGTTAATAAGCTTGAGTCAGTTTATATGGTTTCAGGCTGGACATTTTGACTGATGCAATACTGACATATTGTCTATTTCTTACAGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGAACAATCTTCACGAACAGCTGCTGTGAAAGCTGTCTCCAATGTTATCAAACATATATGGCCTCAATGCAAGGCATAGTAACACACATTGTCTCTCTCTTGCCATGTGCGCACGCATTTGATCAGCATTAGCTGCAAGTCATTTGGTAATTCTCGTTTTGCATTGCAGGTGGAGGTCTTCGGATCTTTTAGAACAGGGCTGTTTTTACCAACAAGTGATATCGATGTAAGGGATTTTCTTTTTGTGCTCTCCAGTGGATTTTTGAGCATTTAACTTGCTGTTCTGTTGAGTTGTATGATCCCCTGGAGCATAACATTTACTTTGATAGCAATGCTGGAATCGTCATGCTTAACATTTTGATGGATGAAATAGCAATACAGGAGAAAAAGAGTAAACACAGAAGGAAGGTGTAGCTCAGCATGCACTTTCTGTTTTCCTGTTTTGCAGAACAGGGAGGAAAAAATGGGATGTATATAATTAGCAATGTTTACTCAGTTTTCCTGGAGTAAAGTATGAAATATGTTTCTCCAGAGTGATTTTCACCCTTAATTGCATTGTTAGCTACTTCCACTTTCATATCAAAGGGATACCCTTCTTCTGCTATTCTATGATTATGATTAGAAGAAAACCGTGATGCATAGCCTGTTACAGACGTGTTAGGTGTTAACCCCTACTTTTCACCTGGGAACAATGAAATACGAATACATGGAAAATGTACCCTATTTTGGGAAACTCTCTCCTTTACCTGTGAGTTTATACATGGTTTTGTGATGCAGGTTGTAATATTTGACTCCAGGGTTAAGACTCCACAAGTTGGCCTGTATGCTCTTGCAAAAGCATTGTCTCAGAAAGGGGTTGCTAAAAAGATACAGGTCCATTTTTCACTCTATTTAACTCTAGTTTGCAACACTTGGTATTTGCAAGACTTTTTCTTTTATTTTGTTAAAGAATTACTCAAAACAAGCCAAAGAGACAAAAATGCATTTTTTTTCCAATGAAGGAAAAGTCAATTTTCTGTCCAACTGAAATATGCATGACGGATAAATAGCTACCTTGAAAGAGACCAAATCCCACTGTTTAAACTTTCACTCTGTGCTGCAGTTGTCAGTTGTTATTGTCAATCAAGTAGATTCCAGCTTACTTATTTTTCTGGTGGACCATTTTTTTTTCTTTCATGGCAGGTAATAGCAAAGGCCCGTGTGCCAATTGTGAAGTTCGTGGAGAGAAAAAGTGAAATAGCTTTTGACATAAGGTTAAATTGTGTTTCTCATCAAATATTCCTTTGTTTCTAGTTTTTTGCGGGAATGCTTATCGAATAATTTCCCTTTTTCTTTTTCCAGTTTTGACATGGATGGTGGACCACAAGCAGCAGACTTCATCAAGGTACTTTGTGCAGACAAATTGGCTAATTACTTCACTGGCAGCGTGTGTTCGTGAAGCTAATTCGTGGGGCAAATGATTGCATATATTTTGAACATCATTTTTACTCTGTACTGCAGGATTATGTGAAGAAGTTTCCTGCTTTAAGACATCTGTGTATGATTCTGAAAGTTTTTTTACACCAAAGAGAGCTTAATGAGGTACAATTACTTAAAACTATTAGTCGTTCCATTCTAATAATAGATTGTTTGTAATTATGGCATTTCTAGATTTCCAATTACCATTTCACTCTTTTTGGTAGGTCTATACGGGTGGAATTGGTTCATATGCTCTTCTCACTATGCTCATCACACATTTACAGGTAAAGCTGAGTCTGTTTTGTACTCTAACGTGATAATGGCCTTTTTTTGTATACCTGAATTGATTTGAGTTATAATTCCTTAAAAAATGGTTGAAAGGTACACATTGTGTTTTTCCTGACATTTAAGATTTTTCTTATAAATACTAAGACACCTAACAAACATAAATTTGGGTTGTTTATGCACTGCATCGCTAATTTGTTCACTGATTCAGTCTACCATATATTACTTACTATGGATAACTGAACTTTAGTGCTAAGTGTTCTTTTTGTTAGTTGGTCTGGGGAGGCAAGATATACTGGGGTATCGTAAAAAGGAGCACAATTTGGGGATTCTTTTGGTAAGCAATACTTGTTTTAAATGTTTAACAGTAATGCAATGTTTTACATTACAATGCTTTGACTTCCGTTGCATGTAAAGTTCCATTGGAAATATTCATTTCATCGTGGTATTAACCATAATGCATATTGCATACTGCTTCCGACCATATCGTTCTCAGTATACACTTTTTTACGTTGTCTTTGCTAATGGAAAGGACATGCATTCTCTTTATAATTAAGGGGGCATGACACATGATTGCAGCTCTTTATAGTTATTTTTCCCCTTCATGGCAGATCGCATTTTTTGATTTTTATGGACGCAAGTTGAACAATTGGGATGTTGGAATATCCTGCAATTCTGCTAGGACCTTTTTCTTGAAGACTGATAAAAAGTAAGGTGTTTACTAGCGGGCTTAGACCAAATGAATATACAATAAAATTATCATCTTCTTAGTATTTTGTTCAACTGAAAAAAAAGGATAATTTTTTCAGTATTCTTGTGTATTGCTGTAGAACAAGAATATCTCATTTGCTTCTAACTAGGCCATTCTGTTAAACACTTAAAACTGTTGAAAATCTGCTCTGTAAAGATTTATAGGTGAAATGTCATTATATAACTGAAAGAAAATTTGATGCGGGTGCAACTGTTTGAGTTGCTAAAATTTTGACTTTGTTGTATAAGCCATGGAACTTGTTTACTGATCCTGTTTGTGTCTCTCTGCTTTTCAAGCTTTGCAAATCCTGATCGAGCATACCTTCTAGCTATTCAAGATCCTATGGTATGATCTTTGGCCCTTTCCTTTTAGTCTTGGTTAGCTTTAACATCTCCAGCTTCAATGGATTTACCTATTGTTTTTCTTATGGCCTAGGTACCAGATAATGATATTGGGAAGAACTCATTTAACTATTTCAAGGTATTATTTCTTACAATGTTGTTTGTGCTGTGGTTGTGATACTTGAAGTATTACTCGTTTACTGTTTCATAATAATATATGCAAGCAATATCGATGAAAGTGTTCCTATCTTATAATGAGCCTGTTACTTTGCTCTCAATGCCAGTTTCCTGGTATGGTGCTTACATGGTATTTCATAGCAATTTTGCTAGGTTATACTTGTGTTATTTGAGCAATGTTCCGTGGTACTCTGTAATGGTTTGGTACCCTGTCACTGTCAGTATAGTATTTTGTTCAGTGATAGAGTGATAGTCCATGTTCTGTTAAGGGTAATCAATCTGAGGTTATCTAAGGGCACTAACAGTTATGTCCTCAAGTTGTCACCTGTCCTGTTCCTTTTTTGCCACTGTTGCACGTTCGTTACCAAAGTTCTTCAGGTTTTCGGACCAAGTTTCTTGAAACCATAAGAGGTGGTGAAACTGGAACATGGTATAAACTAGTACCCTTTTTCTGTCACCAGAACTAGTTATCTTCTTTAGTTTGAAACCCGAAGCTTTTGCATATCTGGATTCTGGAGTTAGTGATATAACTACTGGAATTTCAAATGTTGTGGACCTTCGTGGTATAGATGTTGGTCCAAATGGGAGGTTTAAGTAGGGTGGTATGGCCAATGGTCCAATCTTAGTTTACAGAATAAGTGAACTTCCTAGAATTTGCAACATATAGTTATTGGACATTGATGTTTGAAGTGTGCTGTCACATTATCTATCACGCCACTTCTATGTGAGCTTTTGGCATGTTTATGAAAAACTATAAATGCGAAAAATCTGATTGAGTAATATTTTTTTTTGACTAACTGATTGAGTAATATTTGTTAACTGCTGCAGGTGAAATCAGCATTTTCAAAGGCTTATTCTGTGTTAACCGATGCGAACTTGATAACAAGCTTGGGGCCCAATAGGAGCATTCTGGGTACCATTGTCAGACCAGACTCCGTGCTCCTAGACCGGAAAGGCTGGAACAAGGACGCTACAATACCTGACATGTTAACAGAACCCTGGGAACCATTACCCCGTCAGTTTGATAGCGATAATGATGCAGTCTATAATTGGCATGTGATAGATGATGAACCACTGCCCAGGAATACTCGATCCTCATCGGAGGACACAAGTCCATCACCTACACAAAAAAGGAAGTCTTCCAAACCAAAACAGAGATCGCGGAAAAAGGCCAAGGCTGATTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGACAGATTTACAAATACCCTCCCACAGTATACTCAGCACATTAGTAGGTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004182

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004182&oldid=41906"