BGIOSGA004202

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Revision as of 11:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004202| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004202, complete gene.| tag = OsI_032...")
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Gene Name

BGIOSGA004202

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004202, complete gene.

LocusTag

OsI_03266

Ensembl Transcript ID

BGIOSGA004202-TA

Ensembl Protein ID

BGIOSGA004202-PA

Length

7860

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31233982..31241841

Sequence Coding Region

31233982..31234050,31234189..31234333,31234423..31234529,31235695..31235782,31235943..31236091
,31236538..31236684,31236881..31236991,31237412..31237511,31237978..31238028
,31239162..31239199,31239313..31239405,31239609..31239692,31240937..31241086
,31241743..31241841

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31233982..31241841 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31233982..31241841 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTCGCAGCACGGGATCCTCCTCGCCGTCGCCATCATCTCCGACCACTTCGGCTCCCTCGTATCCAAGGTGTGCCGCTGCCTGCTCCGCCACGGCGCGCTGCCGCTGCAGGAGATCGTCCGCCGCCTCGAGCTCTCGCCGGGGCAGGTGAAGAACTCGCTCCTCGTCCTCATCCAGCACAACTGCGTGCAGGCCTTCAATGCCCCCAGAGGAAATGGTGATAAGACGGTAACGCACTACCTGGCCATCTTCGACAACATCGTGCACAGACAGCGTTTCTCAAAGTTCCTTTCTATCATCCGTGCAGACATCCCAGAGTCAGAAGCGCTGCTTGAAGGATTGCTTCAGAATGGTAGGCTAACATTTGGCCAACTTGTGGAGCGAACAATTTCTAAAGTACCAGAAGGCAGTATCACACCAGCAAGGGAGGAAATACGAATGAACTTCAACAAACTTGTATTTGCACATTATGTGGAGCGTTGCCCGAAACCTGAACCTTTCTTTGATCCACTTGTAGATGAACAATCTACATCGTCAAGGAAACGTGCTCCAAAAACTGTCGAGATTGCTCTTTCAATTGATAAGAAAGTTGTCAATAGTGCAGCTCTTTCTGATGCAGAAAGATTTTCTGAGATCCCATACATCATGGAAGATGCATCCAATGCTAATGATTCTCCACGTTCTTCTATTTCTGGTGCTAAGAGGAAACATAATGCCTTAGAAGGAGATGCAGAGCTCGATTCAACAATTGCAGAGAACGAAGTACTTTGGCGGGCAAATTTTGAGAAATTCACATTCTGTCTAAAGAAGAAGTTTTGTGCAGACCGAAAGAAACCTAAGTTGAAGGTTGGCACACATCCTATCTGGGAAGCATTTTTCGAGGCCAGTTTAATGGAAAGGGACAACAACTCTGTGACATCTCCAATAAATGGTATTATGGAGAGGCTAGGACAGAAGGAAGGAGATTTAAGCAGAATTGTTGAAGCATCTCGAAATGAGGAGATAGAGTCGCTTGTGAGAAAGAAATACGGGCAAGAAGCTTTTACAATTTTTAGGCTATTGGTCAGAGAACGCGGTCCAGTTGAGACAGATAAAATTATTGACACAACAATTCTTGACAAGCAGATTGTTCATGGAACTTTGTATAAGCTTTGGAAGGACGACTACATCGATACAGAGAGAATCCTTTCTGGAACAGGAACAGGGAACACACAATATTTTGTATGGAGAGTGAAAAATACATTCCGGGAACAGTTCATCGATAATCTATGTCATGCTGCTTTAAACCTGCGGCAAATGGTCAATTACATAGCTGAACTCCTACTCGAGGGCTCAAAGGATGACACAAAGTTGCGGAATAGAAAAAATATTTTGATCTTAGCCCTGACTAGACATGACGATTCTCTCATGCTGTTTCAGGATTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MVSQHGILLAVAIISDHFGSLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQHNCVQAFNAPRGNGDKTVTHYLAIFDNIVHRQRFSKFLSIIRADIPESEALLEGLLQNGRLTFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPEPFFDPLVDEQSTSSRKRAPKTVEIALSIDKKVVNSAALSDAERFSEIPYIMEDASNANDSPRSSISGAKRKHNALEGDAELDSTIAENEVLWRANFEKFTFCLKKKFCADRKKPKLKVGTHPIWEAFFEASLMERDNNSVTSPINGIMERLGQKEGDLSRIVEASRNEEIESLVRKKYGQEAFTIFRLLVRERGPVETDKIIDTTILDKQIVHGTLYKLWKDDYIDTERILSGTGTGNTQYFVWRVKNTFREQFIDNLCHAALNLRQMVNYIAELLLEGSKDDTKLRNRKNILILALTRHDDSLMLFQDF</aaseq>

Gene Sequence

<dnaseqindica>1..69#208..352#442..548#1714..1801#1962..2110#2557..2703#2900..3010#3431..3530#3997..4047#5181..5218#5332..5424#5628..5711#6956..7105#7762..7860#ATGGTGTCGCAGCACGGGATCCTCCTCGCCGTCGCCATCATCTCCGACCACTTCGGCTCCCTCGTATCCGTAAGCCTTCCCCCCTTCTTTTGGGCCTCTTCCCTTTCATTGGTCGGTTTGGTACTCCCCCCCCCCCCCCCCCGGGCTGGGTCTGGGTCTCCTGCTGCTTGTATGCCCTAACCGCCGCCGCCCGATCCCCTCTCGCAGAAGGTGTGCCGCTGCCTGCTCCGCCACGGCGCGCTGCCGCTGCAGGAGATCGTCCGCCGCCTCGAGCTCTCGCCGGGGCAGGTGAAGAACTCGCTCCTCGTCCTCATCCAGCACAACTGCGTGCAGGCCTTCAATGCCCCCAGAGGTGAGCCCCATCTGCAAATCCGCTTGCTTGTATGACCTGATTCGGTGCGCTGATTGTATCATATGTGACTCCATTGTCTGGGTTGTTAGGAAATGGTGATAAGACGGTAACGCACTACCTGGCCATCTTCGACAACATCGTGCACAGACAGCGTTTCTCAAAGTTCCTTTCTATCATCCGTGCAGACATCCCAGAGGTCCTTGCTTGTTTTTGGTTTTACTTTATGCAGTATTACATGGTTAAAATTGAAATTGACCCTAAAAGCTGCCATAGTTTGCAAAATGCTGATATGTGATTTCAATGTAGTCAGATTGTACTTGTTTTTGGTTTTACTTTATGCAGTATTACATGGTTAAAATTGAAATTAACCTTAAAAAGCTGCCATAGTTCTCGAAATGCTGATATGTGATTTCAATGTAGTCAGATTGTACTTGTTTTTGGTTTTACTTTATGATGGTTAAAATTGAAATTAACCCTAAAAGCTGCCATAGTTCTCAAAATGCTGATATGTGATTTTAGTGTAGTCAGATTGTACTGTAAATCTTGTTCTCCACTTTTGTAATGTGGGAGTTAAATGCATCCTGACCATGATTAATGTTCCAGAGTGGATGGAATGCGGCTCTTCTTATTAGCACGCTAATGTTTTTGTATTTCAAAATAATCTAGTATGTATGCACACATAAGTTGTCTTTGGTTGTCCTTGTCATAATTTTTACCATTCATAGCACTAGAAGTGCCACTAATGCAACAGGATAGCTAATACTTTATATCTGGAGTTTGTTATTCAGCACTGTCAAGCTATTGTACTGCTGATCTGATTTTTTTCTTACTCCATTAAGGAGCATACCTGCTTTTCACTGCTAAACCCCTCTCTTGTACACAATGTTTTCCATCTCATATTCCCCATTTGTTGAGGTTTGTAGATGTAAAGTTTGACCTAATGTTTTATTTGTATTGTCGGTACATCATTATAAAAAAATGATAACTGGTAGAAAACATTATGAGTTTTTAGTAATTTACTGTAGAAATTTCTGTATCAAGCCTACATGTTTAACTTGATTAATGAAAGACCTTAGTACCTTACTATGTTGGTTGTAAGAAACAAAATTATATGATCCCCATCCTGAATGTTTGGTTTTTCTGTCAGTTGGTAAGTAGGCCAGCAATTATTGGTTTTTAATATTTATATCCAAATATCTTAACTTATTTTCTGATAGTCTATGCTAGTTTACCCACAAATTTTATCAGTTCATTCTCAAAGCTGAAGAATCTGCTTGAATACCCACTATTTTGTGGTTTCGTGACTCAATTCTTGTGACTTAGTTTGATGACCTTATGCATGCATCTTATATTTCTTTCAGTCAGAAGCGCTGCTTGAAGGATTGCTTCAGAATGGTAGGCTAACATTTGGCCAACTTGTGGAGCGAACAATTTCTAAAGTACCAGAAGGCGAGTCCCATTATTCATGTTGCTATTCCTTCGCCCTTGGTTCCTTTTTTATTAGTGTTCTCTTTCATTTTCTTCTTCTAAACTTCTCTTTTTCTGTGGCCACAACTGACCATTATAGTTTTTTTTTTCTTTCTCAACAATGGGTCATTACATGTTCCAGGCAGTATCACACCAGCAAGGGAGGAAATACGAATGAACTTCAACAAACTTGTATTTGCACATTATGTGGAGCGTTGCCCGAAACCTGAACCTTTCTTTGATCCACTTGTAGATGAACAATCTACATCGTCAAGGAAACGTGCTCCAAAAGTAAGTTAATCATTAGTTCCTAGCATGGGCATTGATTTGTTTAGGTTTTTGGAGTTTCAATCATCTACTTCTACTTTCTAGTTTCATCTTATTTATGGTTTTCTTTGTTTGGTCCGTTGGCCAATGGAAGATTGGTAGAAAATGACTAGACTTCTATTAGTATAGTACTTTTGTGTTTGTAGTTAGATCACCTAAAAATGATAATTTGTTACCTGCAAATGTGTTAGCTCAGTGGTTAAGGAATTTTGTATCCTGCTTTTATGTTGGCTGTCACTAAAACATATCTCTTTTTTTACGTATATAGATATTCAATATTTAAAAGTGGTTATCTACTAAATCCAAGACCTTGATGCTTCGAAGTGTTCCTGTCTTTTCTTCTCTTGATGCGTTCTGTGTATGATGATCGGGTGGGTGAGCTTCGCCTGACTAATATCTCTTTGGAACAGACTGTCGAGATTGCTCTTTCAATTGATAAGAAAGTTGTCAATAGTGCAGCTCTTTCTGATGCAGAAAGATTTTCTGAGATCCCATACATCATGGAAGATGCATCCAATGCTAATGATTCTCCACGTTCTTCTATTTCTGGTGCTAAGGTATTGCACTCTTGAACCCCCTCCAAGAGGTGTATTGGTTCTGCCATTCTGTTAAACTAGAAAAACAAAATGGCATTCATAGATTGATTGTTTTATCAATATGTTATATGCAAGTATTGATGGCCAATGAAGAACCTATTTGAGAAATTTATATACTTTGGTCATCAGCTAATTCTATGTACTGTTATTTCATCAGAGGAAACATAATGCCTTAGAAGGAGATGCAGAGCTCGATTCAACAATTGCAGAGAACGAAGTACTTTGGCGGGCAAATTTTGAGAAATTCACATTCTGTCTAAAGAAGAAGGTTTGCTGCTTTACCTATATATAACATTACTTTCAATAGCCAATTTATGTAGGTGCATGTTTTCATTTTTTTTTCCCTGTAGTGGTGCTATGCTATTTTCTGTATTTGCAAAAGGGAATTTTGAAGCAGCAGCCTTATTTTGCTTGGTGCAAGCTCAATGCATTTCTCATATTGCTACTTGATATGATATTTTTAACAAACAGTAGAAAGGATCCTAATGAAAAAATTATAAGTATATGCACAGAGAAGCATAAAGAGGAGATAAGAAATCCCAGGGCCTTCTTGAACAGTCTCCATCTTGAAGAAGAGAATTGCCAGTTTTTTAAGTATCTGTCTCTGCATGTATGCATGATGCAACTGAATGCAAGGCAATGAATTTTGTTATCGCCTACAATTGAATTCTTTCTTCTCGTATTCAAGTTTTGTGCAGACCGAAAGAAACCTAAGTTGAAGGTTGGCACACATCCTATCTGGGAAGCATTTTTCGAGGCCAGTTTAATGGAAAGGGACAACAACTCTGGTAATAGCCATATAAGTATATCAAGTAATCTTTCAATATTAGAGCCAGAAAATACCTCAATATTATGTTATGGCTGTAGCTTATCATTTATATGTCTGAACATAATTATTTTTGTTTGTTAGGAAGCTTATATAGTTATATAGAGGTCATCAAGAAAGATCAGGCATGTTTTGTGTTGTTTTCTACTGTTGACCAAATTGCGCTAGCTGTTCATTCGAACTGCTTTTTTAGTTATGTTTATGCAATGACAACTGATCTTCTATGAGCAAGATGAGAATGACAGTGGTAGTTTTTTTTTAATTAATTTTCTTATCTCCTCTTCCTTTGTACTTTCTGTTTTCCTTTAGATTTTTCCATTTGAAGGGAAATTGGTAAGATAGATATACTGGCACAATGACATCTTACCATTTAAAGTAGTGGTTTAGTTTAATTCAAGTATTTACCAGTAGATTTTCTATTTATTCAGTGACATCTCCAATAAATGGTATTATGGAGAGGCTAGGACAGAAGGAAGGAGGTACATCGATGACACTTGATCATATAACGAGAGTTTTGGAGGAGTTGAATTGTAGTCCTTCCTCGGAGGACCCAGATTCATTCATTTTGGGTAAGAGATTATTAAATGTTATGTTATTTTCTGTTACTATGGTATAGATATAATTCATCAAAGCGACAATTCATTTATAGCACTTGGTAAATAGGAGACTAGAGTATCCAAGCAGTAATAGTCTAGTTTTGAACTTGACTCTGGTCATTGATTTGATTCCTTGATATATTACAAAATAATGTCAAATGTAACAGTTGATTTGCTTATGGACCTAATGGTGTAGAGAAGAAAATATAAAGCTGCTGCTATCTTATTCAACGTTTCCTATCCTTACTCAATATGAATGCAGATTGGTGATTTTTGGTGCTACTCTTCCTGTCTTCCTGATGCAATATTATTTTATCCTTGTTTTCTTCTTTTTTCCTTTTTAACTCTTCTCATGCTTTTCTTTATGTTCCCTTTCTTCATTTCTTTCATACGATGGCCAACTTTTTTAAGAAAAAGAATGGGAATACAATATCATATTCCCAGGTTTGTGGTGCCACAGCCATGTGGTTTGATATGTAGCCAAGTAGGCATTCTGTATTAGTGTTATCAATGGTGGGAAGGAAAGTGGGAATTGCAATTCTTGCATGTTCACTCAATTTGAAACTTTGATATGCCCCTTTATTTGGAGTTTCACAAATCTATTAACATATCATTAGATTTCCAACTCTATTGTGTTGAGTAATGAATGACCTAGAGTTGACTTTTGGTGATACCTTTGCTGTATGGTTTCTCTTGGGGGTTGGTACCTAGTGCAGAATATCTATACACAGAAAAATGCAATGGTAGCTAAGAGACTAAAATGTTTTTGTCTTTAAATATTTGTAAAAAAAAAAATTAGAACAATGGTTCATATGCTCATCAACTTGATCGGGCACACTAGATTATTACAAGTAAAAACATAATCAAATACACGAGTTTGCAAAATATACTTTTACATGTGGATAACGAGTTATTTTAAAAAAAAATGTCGCGCGTAAAATTTGTCGCAACCTTGAATAAACATCAGTGCTTCCTTTTGTAAGATTCTTAGATGACAGTGGTACTACTCTTTGTAGATTTAAGCAGAATTGTTGAAGCATCTCGAAATGAGGAGGTACATAATTGCTTCACAGTTTTATGTTCTATTTGTTTGAAAGCTACTATTATACCATTTTACTTGGCGTATAAAGATGACAGCATATTTGTTCCTGTATTTGTGCATAATAGATAGAGTCGCTTGTGAGAAAGAAATACGGGCAAGAAGCTTTTACAATTTTTAGGCTATTGGTCAGAGAACGCGGTCCAGTTGAGACAGATAAAGTAAGTATCTCCTACAGCGAGCAAATTTTAGAATTCTAATATATCAGGTTTTCAATTCATTGCTGTTATGAAAGCATCTAGGCCTTTTCATGCTTTATCTTTATTACATGCTGGTCTTCCTATTTTACGATGTTTGGTTGGCAAAATGGTTTCCTGTTATGAACTGCAGTAAATAACACTGGACATTTGGTCGCACCTTGCAGATTATTGACACAACAATTCTTGACAAGCAGATTGTTCATGGAACTTTGTATAAGCTTTGGAAGGACGACTACATCGATACAGAGGTCCGTTACATAATCTACAGAGAAGTTACATATGTTGCTTGGAGTATGGACTTCCTCTAGTTTACTCCCTCCGTTTCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACAGAGGAAGTATATTCTAGAGTAAAGAGAAGGCAGCAAACCGCTTTACATGTTAATGAGGGTTTACACCTTACCATACCAGCCAGACAACCCTTATTAGTTTTAGAGATGCATCAGGATATATTGTGTTTATTTCCAGCCTAAATTTATAGAGATTAGCTACCATTAAGAAGGCTGTTTAAGCATTGATGCAAAGCTTTGAACCTGCCATAAAATTGATTGTGATACTAAACATAGGGATTACTGACTTAAATGTGGCTTGACCCCAGAAGAACTTACATGCAAAGAGCAGCCTAATATGTTTCAAAGGCATTTCTGGGATGCTGGCTCTTTTCTGAATAGTGCTCCAAACACTAATGTATGCCAGTCAAAAAAGACTGTATTTTGGAACATTTAGGTGTTCTAGAGGCACTTATATTTGATATTTGATCCAGAGCAAACAATTTGTAAATTTTCATGCAACTAGCAAAAATGCACATACTTATTTGGAAATATGGTATTCACTTGATTCAAATGAATATTAGACTATTACATACTACTAGAAAAATATCAATGACTAATTTGTAAGACGTGCAAATGTAGTGGTGGTGGGTTGGCAGAACCACCACCACTATTGTATTTTATAGTAGTATAGATATAGATAGATGTTGCCCAAAAGGGGAGAAGTTTTTTTATCTGGCAGCTTTGAGCTTTTGCTTTTCTGGAGCAAAATTTTCACAACACCTATGTTAAGCCAAGGAATCTAGTCAATTGACCAATCTGTTATGAATCAAAGCTGATGACAATAACTCCTACACTATTATAGACATGTATAACCATGCAAAATATTTGTAGGGGTGACTGTGTCCGTGCAACTTTATAGTTACAATTTTTTTTATGTTTTCCCTCCCATATCATTCTCCCAAGTACACTTCCTCACCTGTAGGATAATTAGTGGAGTTAAAGTGCATAAATTTCATATGCATGCACCATGCCACTGAGATAGTTGTATATGGATGTTCTGTATGTTAAACAATAAAACTATGCTTCGTTTGAACTTCTATTGATGGTAATTTCATTGTGTTTGCAGAGAATCCTTTCTGGAACAGGAACAGGGAACACACAATATTTTGTATGGAGAGTGAAAAATACATTCCGGGAACAGTTCATCGATAATCTATGTCATGCTGCTTTAAACCTGCGGCAAATGGTCAATTACATAGCTGAACTCCTACTCGAGGTCACATACTGATCTTTAAAGCATTGCAAATTTACAATCTTCAAATAAGTCTTACCTTGCTTAAATATGTGCTTCCATTGTGGATCATCATAGTACATGCAACACCACATTCATGGCAAATCAAATTGTGGTGCATATATTTTAATCATGTTCTTATAAGCTTATTTGGTCAGGTCCAGGCTGTGCCTTTCACTAGTTAATTGCAAATTCAGAACAGGAATATAAGTAGCCACTAGAACATAGACATAGTCTCGAATTCACATGTTTGATCGTTACCTTTTCTACTCAGTTCTACAAAAATATTAAAAATCTAACTGCATGAAAGCATTTTTCATGACAAATCTACTAATGTCATTTTCAGATATTAAATCTTAATGTTGCATGTACTAATGTTTTAAAATAAGGTTTGGTTGTGCATATTCCAATATGTCATACTATTAGATATTCCAGAAATACCAACATGTAACAAATTATAATGTATTCAATGCTCTGTGGCTGTCATAACCAGAACTGGCTGTTCTGCATGGTTGATAAAACGATGTAATACTAAATTATGAATTGGGATGGCATTTATATTTGGTAGCTTAAAGGAGTTTTCACTCAAACTGCTATGTACTCAAGTGAACCTCACATTGTTTATACATAATGCATTTCAGGGCTCAAAGGATGACACAAAGTTGCGGAATAGAAAAAATATTTTGATCTTAGCCCTGACTAGACATGACGATTCTCTCATGCTGTTTCAGGATTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004202