BGIOSGA004209

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Revision as of 11:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004209| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004209, complete gene.| tag = OsI_032...")
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Gene Name

BGIOSGA004209

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004209, complete gene.

LocusTag

OsI_03278

Ensembl Transcript ID

BGIOSGA004209-TA

Ensembl Protein ID

BGIOSGA004209-PA

Length

5247

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31334845..31340091

Sequence Coding Region

31334845..31334973,31335311..31335374,31335934..31336035,31336369..31336419,31336509..31336570
,31336793..31336883,31337116..31337180,31337311..31337505,31337605..31337724
,31337990..31338060,31338185..31338410,31338507..31338557,31338728..31338805
,31338905..31339133,31339356..31339495,31339963..31340091

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31334845..31340091 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31334845..31340091 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAACCTCATCTCGCTCGTCAACAAGCTACAGCGCGCGTGCACCGCCCTCGGCGACCACGGCGAGGAGAGCGCGCTGCCCACCCTCTGGGACTCGCTCCCGGCCATCGCCGTCGTCGGCGGCCAGAGTTCGGGTAAATCGTCAGTGTTGGAGAGTGTTGTTGGGAAGGATTTCCTGCCTCGAGGCTCAGCTCTTGTGAGGAAAGAGATTGCAGATGAAACTGAACGAGCTACCGGCCATAAAAAGCAAATATCACCTGTGCCCATTTATTTGAGCATATATTCACCAAATGTTGTTGACCTCACTCTTATTGATCTTCCTGGCCTTACTAAAGTAGCTGTTGAGGGACAATCTGACAGTATTGTGCAAGACATTGAAACCATGGTTCGCTCATTTATTGAAAAGCCCAACTGCATTATTCTTGCAATTTCTCCAGCAAATCAGGATCTTGCAACTTCTGATGCCATAAAGATTTCACGTGAAGTTGATCCAAAAGGTGAAAGGACCTTTGGCGTACTCACGAAAATTGATCTTATGGACAAGGGCACAAATGCTGTCGATATGCTAGAAGGAAGATCCTATCGACTACAATATCCATGGATTGGTGTTGTCAATCGTTCCCAGCAAGATATAAACAAGAGCGTTGACATGATTGCTGCCAGGCATATAGAGCGTGAATATTTTGCAAATACCACGGAATATAAATACCTTGCTCATAGAATGGGATCAGAGCACTTAGCAAAGATGCTTTCAAAACATTTGGAATCTGTGATTAAATCAAGAATTCCAGGGATCCAATCTCTTATAAGCAAGGCAATTGCAGAGCTAGAAGCTGAACTTCATCGTCTCGGAAAACCTATTGCTACAGATGCCGGAGGAAAATTGTACACAATTATGGAAATATGCCGCATGTTCGATGGTATCTACAAGGAGCATCTGGATGGAATGCGCCCAGGTGGCGAGAAAATCTACTATGTATTTGACAATCAATTTCCGGTTGCTCTCAAACGATTGCAGTTTGATAAGAATCTTTCAATGGAAAATGTAAGGAAGCTTATAACACAAGCTGATGGATACCAACCACATCTCATAGCTCCGGAGCAAGGGTATCGTCATCTTATAGAGTCTTGCCTAGTAAGTATCAGAGGTCCGGCTGAGGCAGCTGTTGATGCGGTCCATGCAATACTCAAGGAACTAGTTCGCAAGGCTATCAGTGAGACAGATTATGGGAAGACTATCAAGATCAAATCTATTGAGTCTCCTGCCTACAGGACTTTGGCATTTGTGTCATCGTTCAAACACGAGTTAAATCAATTCCCCACTCTCCGTGTGGAAATAAGCAATGCAGCTTTTGAATCATTGGACAGAATGCGGAATGAAAGCAAGAAAAGTACTCTGAAGCTGGTTGATATGGAGTGCAGCTATTTAACTGTTGATTTCTTTAGGAAGCTTCCTCAGGATGTTGAGAAGGGTGGAAATCCAACAAACTCTATTTTTGACAGATACAAGGATTCATACCTTAGACGAATTAGTACTAATGTTCTGGCATATGTCAATATGGTATGTTCAAGCTTGAGAAACTCCATCCCTAAATCTATTGTTTATTGCCAAGTCCGGGAGGCAAAGCGCACATTGCTCGATCGCTTCTGTACAGAATTGGGAGCACGAGAGATCAAGCACATTTCTAAGCTTCTTGATGAAGACCCCGCGGTGATGGAGCGTAGAGCTAACCTCGCCAAGAGGTTGGAACTATATCGGAGCGCCCAGGCAGAAATCGATGCGGTTGTGTGGGCCAGATAG</cdnaseq>

Protein Sequence

<aaseq>MENLISLVNKLQRACTALGDHGEESALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSALVRKEIADETERATGHKKQISPVPIYLSIYSPNVVDLTLIDLPGLTKVAVEGQSDSIVQDIETMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTNAVDMLEGRSYRLQYPWIGVVNRSQQDINKSVDMIAARHIEREYFANTTEYKYLAHRMGSEHLAKMLSKHLESVIKSRIPGIQSLISKAIAELEAELHRLGKPIATDAGGKLYTIMEICRMFDGIYKEHLDGMRPGGEKIYYVFDNQFPVALKRLQFDKNLSMENVRKLITQADGYQPHLIAPEQGYRHLIESCLVSIRGPAEAAVDAVHAILKELVRKAISETDYGKTIKIKSIESPAYRTLAFVSSFKHELNQFPTLRVEISNAAFESLDRMRNESKKSTLKLVDMECSYLTVDFFRKLPQDVEKGGNPTNSIFDRYKDSYLRRISTNVLAYVNMVCSSLRNSIPKSIVYCQVREAKRTLLDRFCTELGAREIKHISKLLDEDPAVMERRANLAKRLELYRSAQAEIDAVVWAR</aaseq>

Gene Sequence

<dnaseqindica>1..129#467..530#1090..1191#1525..1575#1665..1726#1949..2039#2272..2336#2467..2661#2761..2880#3146..3216#3341..3566#3663..3713#3884..3961#4061..4289#4512..4651#5119..5247#ATGGAGAACCTCATCTCGCTCGTCAACAAGCTACAGCGCGCGTGCACCGCCCTCGGCGACCACGGCGAGGAGAGCGCGCTGCCCACCCTCTGGGACTCGCTCCCGGCCATCGCCGTCGTCGGCGGCCAGGTACGGTGCCTCATTCCGCGCCGCCCGGGCTTTCCTCCCTCTTGGTAGTTACCATCATTTTGTTTTTGGTTCCCGTGCCGCAGTGGCCGCGTGCTGCCTGTAGTTTGATTTGATCGGCATTTGGGTGTAGGCTACTCGCTTGTTAGATCGGTTTTAAGAATGGGCCATTTCGTGGATTTTTGATCAAGTATTGTGCGATCGTCATGCTAGATTTGGTTTAAATATGTGTTCGTTGTGTGGCTGCTTGCGATGCAAATTGTGGAATCAGATACTACCAAATATTTTGGGTTTTGACATGAATGCCGTTTTCTTAATTCCATTTCGTGATGTATGGCAGAGTTCGGGTAAATCGTCAGTGTTGGAGAGTGTTGTTGGGAAGGATTTCCTGCCTCGAGGCTCAGGTATGGTCGGTCTCAGGATGATGAGCTCACAGAGGTTTAGCGCCAGCTTCCTGATTTGTCTAATTTGTGATGTTGGTTATGGACTTCTCTAGGAATTGTTACACGGCGCCCTCTGGTCCTGCAACTCCATAGGATTAATGGAGACAGAGAATACGCAGAGTTCATGCACAATCCCTACGGTTAAATATACAGATTTTGGTAATTCATCCCGGTTGTTGCTCATTTGCTTTGGTGGACAAATGATATAATGATATGAACATAATGATGCTGGGAGAGATGCATAATGCAAACTGAAGATCATATCGCTCTCACTATGCACCATCATAGTTGTAATTCTCAATAATGCAATCTAACCACATAAAACTAGTTTTTGATCATTCACCTTGCTGCACTACTTTGATTTTGGTCGTGTTTTGTTCCCTTAAATGTGGATTCGATTGTATATCTTCTGCCAGAGGCGCATGTTTTTTTATTCCTAAATTGTATGTAAAGTGCTTCTCTAAGTGCATCTTACTGATGCATGGCAAGTGATAAACTGATAACAGCTGCATTTTTACAGCTCTTGTGAGGAAAGAGATTGCAGATGAAACTGAACGAGCTACCGGCCATAAAAAGCAAATATCACCTGTGCCCATTTATTTGAGCATATATTCACCAAATGGTAATGCAATGCTGGTAATTTGTTTGTTCAGTTTATACTATTTGCAGCTATTCTCTGGCCAGCCCCCTCTTATAATCCTATCTTTTTTATATTAATATAATTTGTATATTGGAGTTTATTATGTACATTTTTGAAAACCACAAGAAAAACTGAACAAGAAAAATATGAGCGTGGAAAATACAAAGCCTACTCGTTTTGTTTTCCCTCAGTTTTGCTCAACTGACATGGATAAGGGATTGGGATATAAAGTCCTGATTGTTTACATTTTTGTTATGTTCATGTGATTTGGTTATTTTACCTCCTACCGTTTGCTAATGATTTTATTCATTTCAGTTGTTGACCTCACTCTTATTGATCTTCCTGGCCTTACTAAAGTAGCTGTTGGTAAGTTGCTTTCTTATCTTTAGATGCTATTTTCTCTGTTGTTGATGTGACAGTTAGTCTGACTAATGGTTTGTTGAGATGCTCAATAGAGGGACAATCTGACAGTATTGTGCAAGACATTGAAACCATGGTTCGCTCATTTATTGAAAAGGTACTGTTGAATAACCTGAACAAGTTTTTTTTATTACCATAGATGAGCATATGTAACAGCTTCAGCTGAATAAAGGGGGTGATGATGCACATCTTAAGTAATTTTGTCAACTGACATTATCTTATCCTTTCCCTCTATAAGCTATTATTTACCCATCATTTGTTATGCTTGTACATTGCATAAAAGATGTGCATAACAAATGCTCTAGTTTACTCTTTACAGCCCAACTGCATTATTCTTGCAATTTCTCCAGCAAATCAGGATCTTGCAACTTCTGATGCCATAAAGATTTCACGTGAAGTTGATCCAAAAGGTATGGCTCAACTAAAGGTACCAATTTAATGAAGAAGAGGACGAGTAAGTGATGCTGTGGCTACTGGTTAGAATTATTGGGAGTGTTCTTATGTAATTGTATGTAAAGTGAACTTAATGTGGCAATCTCATTCAGATCATGTTTTTTTGATATAGTTGCAACCTAGTATACCAATAAAAGAATTGTAAAATAATTGTGATATTCTATAGAATAGTAACTCTGTTGAATTCAGGTGAAAGGACCTTTGGCGTACTCACGAAAATTGATCTTATGGACAAGGGCACAAATGCTGTCGATGTAAGTTGTATATTGGTTATTATCTACTAGAACACTTGATAATTGTCTTGAACAAATAGGTTATTTGATTATTCTAGGTTATCCTACAACAGCTTGAACCTGAATTTTCCAACTGAGTTCTGTTATGCAGATGCTAGAAGGAAGATCCTATCGACTACAATATCCATGGATTGGTGTTGTCAATCGTTCCCAGCAAGATATAAACAAGAGCGTTGACATGATTGCTGCCAGGCATATAGAGCGTGAATATTTTGCAAATACCACGGAATATAAATACCTTGCTCATAGAATGGGATCAGAGCACTTAGCAAAGATGCTTTCAAAAGTATACTTAGTTTTATACTTATATGATGTGTCTCTGTGCAGTGTTTTTGGCTTATTTGTCTTGATGGTTTCATGACAATCTGTTATGCACTCCCTGCAGCATTTGGAATCTGTGATTAAATCAAGAATTCCAGGGATCCAATCTCTTATAAGCAAGGCAATTGCAGAGCTAGAAGCTGAACTTCATCGTCTCGGAAAACCTATTGCTACAGATGCCGGAGTAATTCTCTGTTTTTCTGTCGATGTATTTCATTTAATCTTCTCTAGGCCCCCAAAAGGCAAAAGTTAAAACCACTCATCCCCAAACAAATTACAAAATTATTAGTCCTACTGTGGTATTACCCTTCATTGTGTACTTTAGATTCTTTGCTTTGATTTATACTTCTAGTTTCCATTCAGATTTACGTCATGATATTACTATTATGTGTGCAATATTCTTTGCCTTCGAATATGTTAATTGCATGTTTCCTGTTCCTGATATGCAGGGAAAATTGTACACAATTATGGAAATATGCCGCATGTTCGATGGTATCTACAAGGAGCATCTGGATGGAATGTATGATTCAACAGATAGCTTTTCTGTGCACTGTCTTTGAAGAAGTCTTTCTTTCCTTTTTGTATCCATGATGCTTACCCACTCGGCCACTCCTATTTATCAAAGAATTACTCTTATCTTGCAGGCGCCCAGGTGGCGAGAAAATCTACTATGTATTTGACAATCAATTTCCGGTTGCTCTCAAACGATTGCAGTTTGATAAGAATCTTTCAATGGAAAATGTAAGGAAGCTTATAACACAAGCTGATGGATACCAACCACATCTCATAGCTCCGGAGCAAGGGTATCGTCATCTTATAGAGTCTTGCCTAGTAAGTATCAGAGGTCCGGCTGAGGCAGCTGTTGATGCGGTATGTTATATTTCTTCATTCTTGCTAATTTTTTTTGTTATTGATTACTACATTTCTCCTGTAGTTCAGAATCTGACACTTTTTGAGCATTGGTAGGTCCATGCAATACTCAAGGAACTAGTTCGCAAGGCTATCAGTGAGACAGATGTATGTTTTCTTTCTTCTTTTTCCATTGCTCCACTGGACAGTTTTGTTTTTTACACTTTATTAGTGAGTGCATTCAGTCACGTGAAATGTAATGCTTCTATTTTCTTGTATAAAGGGGGAATGGGTTAAAGTTCTGATTGAGTAAACTTACACTATTTTCACATATACAGTATGGGAAGACTATCAAGATCAAATCTATTGAGTCTCCTGCCTACAGGACTTTGGCATTTGTGTCATCGTTCAAACACGTACAATATTAGAATATATAGAGAGAACTGTTTAGAAAATTCTCTTTTTGAATAATCATTTTAAGGAGCATAGTAAATTGTTTGATCACTTTCTTGCAGGAGTTAAATCAATTCCCCACTCTCCGTGTGGAAATAAGCAATGCAGCTTTTGAATCATTGGACAGAATGCGGAATGAAAGCAAGAAAAGTACTCTGAAGCTGGTTGATATGGAGTGCAGCTATTTAACTGTTGATTTCTTTAGGAAGCTTCCTCAGGATGTTGAGAAGGGTGGAAATCCAACAAACTCTATTTTTGACAGATACAAGGATTCATACCTTAGACGAATTAGTAAGTTCTCATCTTCCCCTCAAAGAAGTTCTCATCTGTTTGGGTATTTACAGCCTTACAGGTTACTGATATCCTTACATAAAAGATTGTCTGGCCTGACTGGCCATATCCTATGAAGCTGTTATATTTGACAACTGATCCATGCGTTTACCATAACATCGTTGACTCATTGCTTAATGATTATTTAACGCATAACTTGCAATTGTAATTCTCAACTTCCAGGTACTAATGTTCTGGCATATGTCAATATGGTATGTTCAAGCTTGAGAAACTCCATCCCTAAATCTATTGTTTATTGCCAAGTCCGGGAGGCAAAGCGCACATTGCTCGATCGCTTCTGTACAGAATTGGGAGCACGAGAGGTGAGTTACTTAGCAATTTGATTGGTAATTTGCTTAGTGCCCAGGGGCGCTGAGGTTGTGCCCCTATATTCCTTCAACATTATTGTATAGTTATTATTATTATTTTCTGAATGAAACTAGCTCTTACCGTTCGAGTATTTAGTAATTGTCACGATTAGAATCCAATTCAAAGGTAGCACATATATACATAGAATCATGCCATCATACATGTTAGTGCCTATAATACTAGCTGCCTGAGAATTAGAATTATCGCCTTATGGATTGTCTGCATCTCTGCTCACCAAGCTGACCGAACATTTGTTTGTGTATTGTTATTATTATCCAGTAAACCATATTTTTCGTATGAACTGTCATCGTGGTGTGTATCGATCGGTGCGCACTATATAAATGGAAACAACCTAACTTTATGCATCATATAAGAACAATTATCGACTTTTTTACTGGTACTCTTGCCGTTTGTTGTGCAGATCAAGCACATTTCTAAGCTTCTTGATGAAGACCCCGCGGTGATGGAGCGTAGAGCTAACCTCGCCAAGAGGTTGGAACTATATCGGAGCGCCCAGGCAGAAATCGATGCGGTTGTGTGGGCCAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004209

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004209&oldid=41933"