BGIOSGA004212

From RiceWiki
Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004212| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004212, complete gene.| tag = P0019E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004212

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004212, complete gene.

LocusTag

P0019E03.36

Ensembl Transcript ID

BGIOSGA004212-TA

Ensembl Protein ID

BGIOSGA004212-PA

Length

3416

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31406772..31410187

Sequence Coding Region

31406772..31406928,31407471..31407829,31408183..31408262,31408345..31408396,31408490..31408531
,31408619..31408697,31408860..31408891,31408971..31409039,31409126..31409200
,31409281..31409397,31409486..31409536,31410044..31410187

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31406772..31410187 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31406772..31410187 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCCGCTCCACGCCGCCCCGCACCATGCCGCGGCCGCGGCCGCGGTCGTCTCCTCGCCCTCATCCGCGCCGCTCCTCCTCCGCGCCAAGCCTTACCACCCCAAGGCGGCGGCTTGCTCCTTCACCGTGACCGCCACCACTCCGTCGAGGAAAGCTTTCCTGTCGTGCCCGGATCACGGCCAGGCGGCGGCGGGGGCGGCGCCGCCGCGCTCCGCCCCGGCGTCGTCGCCGGCGCTCATCTCCTCCGTCCAGGACCTGTACGACTTCATCTGCAGCGGCCCGCTCGTGGACAGGATCGGGTACACCAAGGAGAAGATCGCCGGCTCCATCGACCGGTGGCTGCGCTGCGGTGTGCAGGTGGCCCGGCTGTTCCGCCTCAACGAGCTCCACCTCTCGGAGGCGGAGAAGGCCAGGATATACCACTTCTACATCCCCGTCTTCCTCTGGTGCGAGGACCAGGTCACGGAGCACAGGGCCAAGTACAAGGACGGCGACGAGATCCCTCCATTAGTGATTGGGGTCAGCGCTCCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCACTTGATTATCTTTTTCGGGTTGCTGGTAGGAATGCCGCTACATTATCTATCGATGACTTCTACTTGACGGCAGCAGAACAGGGTAAATTGAGGGAAAGAAATCCTGGAAATGCTCTTTTGGAGCTTCGTGGAAATGCTGGAAGCCATGATCTCCCGTTCTCAGTTGAAACACTTGAATCGCTGCTTAAACTAACTAAAGAAGGTTTGAAGATGAAGCTTCCACGGTATGACAAGTCTGCTTTTGGTGGAAGAGGTGATCGGGCTGATCCTTCAACATGGCCAGAGGTTGAAGGGCCCTTAGAGGTTGTTCTTTTTGAAGGATGGATGCTTGGATTCAAACCTCTTCCAAATGAAGTCGTAAAAGCAGTGGACCCTCAGCTTGAGGTGGTTAATAAGAACCTTGAGGCATACTACGATGCATGGGACAGGTTCATTGGGTCATGGATGGTCATAAAAATAAAGGAACCTAGTTGCGTGTACCAGTGGAGACTGCAGGCAGAGATAGCTATGAGAGCAGATGGGAAACCAGGAATGTCTGATGAGGAGGTCATGGATTTTGTGTCGCGCTACCTACCAGCATACCACGCATATTTGCCCACTCTATATAAAGAGGGACCAAACGGCTCGAACCCAGACCACCTGCTGGTCGTTGACATAGACGAAAAGAGGAATCCTATGTGGGGTAGATGA</cdnaseq>

Protein Sequence

<aaseq>MTPLHAAPHHAAAAAAVVSSPSSAPLLLRAKPYHPKAAACSFTVTATTPSRKAFLSCPDHGQAAAGAAPPRSAPASSPALISSVQDLYDFICSGPLVDRIGYTKEKIAGSIDRWLRCGVQVARLFRLNELHLSEAEKARIYHFYIPVFLWCEDQVTEHRAKYKDGDEIPPLVIGVSAPQGSGKTTLVFALDYLFRVAGRNAATLSIDDFYLTAAEQGKLRERNPGNALLELRGNAGSHDLPFSVETLESLLKLTKEGLKMKLPRYDKSAFGGRGDRADPSTWPEVEGPLEVVLFEGWMLGFKPLPNEVVKAVDPQLEVVNKNLEAYYDAWDRFIGSWMVIKIKEPSCVYQWRLQAEIAMRADGKPGMSDEEVMDFVSRYLPAYHAYLPTLYKEGPNGSNPDHLLVVDIDEKRNPMWGR</aaseq>

Gene Sequence

<dnaseqindica>1..157#700..1058#1412..1491#1574..1625#1719..1760#1848..1926#2089..2120#2200..2268#2355..2429#2510..2626#2715..2765#3273..3416#ATGACGCCGCTCCACGCCGCCCCGCACCATGCCGCGGCCGCGGCCGCGGTCGTCTCCTCGCCCTCATCCGCGCCGCTCCTCCTCCGCGCCAAGCCTTACCACCCCAAGGCGGCGGCTTGCTCCTTCACCGTGACCGCCACCACTCCGTCGAGGAAAGGTTAGCAACTCAGACATCATTAGAAAAAAAAAAACCATCTAATATCTGCGTGCGTGCGTACGACGAGAGGTCACGGCGGCGCACTGTGGCAACCAACTAGGAGTACTTTGGCTCGTCTGCGCTGGTCTGTGCCGCTGTGCGCGCACTGTTTCTCTTCTCTTGTTTATTGCTTGCTTGGCCTTTTCCGTGCTCGCGTAAGCGGATGAGTGTCGTGTCCCATGGTGTTTTGCAAGCGTACACCTGCCCCTGCGTCTGACTCGACGAGCCGTTTCTTTATCCTTTTTTTTTTTAGCTGCAGAGAGCAATGTTTGATCATCCATATAAAACTCTCGCGCATCCGTTTTTCTCTCTCTTGCTGGGGTCAAGAGGTCAATACACAGTTCGGTCCTTCAAAGATTTGGTCCTTTTTGCTATAGTTTAGATCGTCGATTTCTCAGGTTCTTGGCACCGCATGGATGGTAGGATCAAGAAAGGCATTGCCGCGCAAGTCACGATTCCTCTCGCCATTTTAACTGATCGCCCTGTTTCTTTCTTTGCGCCAGCTTTCCTGTCGTGCCCGGATCACGGCCAGGCGGCGGCGGGGGCGGCGCCGCCGCGCTCCGCCCCGGCGTCGTCGCCGGCGCTCATCTCCTCCGTCCAGGACCTGTACGACTTCATCTGCAGCGGCCCGCTCGTGGACAGGATCGGGTACACCAAGGAGAAGATCGCCGGCTCCATCGACCGGTGGCTGCGCTGCGGTGTGCAGGTGGCCCGGCTGTTCCGCCTCAACGAGCTCCACCTCTCGGAGGCGGAGAAGGCCAGGATATACCACTTCTACATCCCCGTCTTCCTCTGGTGCGAGGACCAGGTCACGGAGCACAGGGCCAAGTACAAGGACGGCGACGAGATCCCTCCATTAGTGGTATGCACATGAAACATTTTTCTCTTTATCATAGAAGAAGCTGATGAAATCTGACATGTAGCTTTGTCCACTAGTGCCTGATAGCATCCATTCCAAACCTCTCATGGCATGTTCCATCAGGTGGACATAGCAGAACATATTCCTCTGCATTATGAGTACATCGCACAAAATATTTCATCATGAAGCATCTATTGCTTTAATCAGCATGACACGCACTCATGGATCGTTTTATCACGAAGGGATATATTAATTATACCGAAATGGGAACTGTGAATATCAAGTCACAAGAACGGACAAGTCTTTATCTGATTCTAATTCACATTTTGTAAATGAATCGTCTTTGTGTGATGTAGATTGGGGTCAGCGCTCCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCACTTGATTATCTTTTTCGGGTTGCTGGTAGGTGAGTTCTTCTTGTCATTCTAGTCATGTTATGTTTACCCGTATCAATGAAATTTAAAAGACAAGACTTTTCCGTGCCTTAGGAATGCCGCTACATTATCTATCGATGACTTCTACTTGACGGCAGCAGAACAGGTGTGAGTCTTCAAATATTGTGCAATTATCCGTTCTGTTTTACTACTCCAAGTACTTGGCAAATTAGTGAAAACAATTAATGAATATTTCCAGGGTAAATTGAGGGAAAGAAATCCTGGAAATGCTCTTTTGGAGGTACAAAGAACACCCCAGATCCAATATACACTGTTTTGGTTCAAGTATTGTATTGTGAACTGAGAGTAAATAACCAAAACTTTACAGCTTCGTGGAAATGCTGGAAGCCATGATCTCCCGTTCTCAGTTGAAACACTTGAATCGCTGCTTAAACTAACTAAAGAAGGTACTAATTTTTGACAAGTATATATATCCTCTTCAGACCAATTTTATTATATTTGAACAGCCTTGCACATAGTATATTTTTTATTTTGGAGAATTTATTGAAATGATATGCATCCTAGTTTCAATGTAAAATAGTTTGTCACTGATATTACAATATATTTAGGTTTGAAGATGAAGCTTCCACGGTATGACAAGGTAAAAGGTTGCAGTTATCGTCGCCTAGATGATTTTTATAATTGAGTAGCTGCATGATACATGTCACATGTCCATGTAGTCTGCTTTTGGTGGAAGAGGTGATCGGGCTGATCCTTCAACATGGCCAGAGGTTGAAGGGCCCTTAGAGGTAAGCTCATGTTGAGCTGTAGGGCTTTTTGAGATGAGAAAATTGTAATTTTTGAACATTTTCTATGTCTGTTTTCTCTGTCCTAGGTTGTTCTTTTTGAAGGATGGATGCTTGGATTCAAACCTCTTCCAAATGAAGTCGTAAAAGCAGTGGACCCTCAGGCGGGTTTCCGATATTACCACATTATCTGATTTCTTTGTTTCTCTTTTACTTAATATGACTTGCCTTTTTTCATCTTCAGCTTGAGGTGGTTAATAAGAACCTTGAGGCATACTACGATGCATGGGACAGGTTCATTGGGTCATGGATGGTCATAAAAATAAAGGAACCTAGTTGCGTGTACCAGTGGAGACTGCAGGTCATTACCAGATTTATCTGAGTAACTAATGGTGTCAGAAAATGCACAACCATGAATTGCAATTTTCTTATGTTATTTGGATTTACAGGCAGAGATAGCTATGAGAGCAGATGGGAAACCAGGAATGTCTGATGAGGAGGTTTGTTTCTCACATAGCTATGCATTCATTATAACATCCTATTGGCTTCCTTTCCGTCCTAGTTTGATAATTTGCTAATGCCTTGCTGTTACTAACCGTCAAGTAAAGTAGACAAATTGCCACCAATTAGGAATAGCTCCCACTGAATTCAGTTGTGGCCAAACTGAGTAAGTACACCACTCACATCAGTACATTTGAGTAAAATCTTCAGGGACGCAAAAGTACTTGCTACTCAGTGAATCACCTCTAAAAACCTATTCATGTAACAGACTGGTTTTCCGTGTTGAAAATTGAAAGAAAACAGGGAATTCCCGTGATTGGAAAAAGAAAAAAACTGCATCACTTCACCTGAAAGTTGAGCAACAAGAACTGTTACTAGTATTGAATTATCTGATGTATTCTTCAGTGAACAATTTTATGCTATTCACTGAAGTTCATTCGAGTCTTGGATTCTCTTTCTAATGCATTTGATGAGCTAGGTTAACATGCTTCTGGTAATTCTTGCAGGTCATGGATTTTGTGTCGCGCTACCTACCAGCATACCACGCATATTTGCCCACTCTATATAAAGAGGGACCAAACGGCTCGAACCCAGACCACCTGCTGGTCGTTGACATAGACGAAAAGAGGAATCCTATGTGGGGTAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004212

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004212&oldid=41936"