BGIOSGA004218

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Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004218| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004218, complete gene.| tag = P0478H0...")
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Gene Name

BGIOSGA004218

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004218, complete gene.

LocusTag

P0478H03.8

Ensembl Transcript ID

BGIOSGA004218-TA

Ensembl Protein ID

BGIOSGA004218-PA

Length

3381

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31478527..31481907

Sequence Coding Region

31478527..31478628,31478914..31479173,31479367..31479654,31479802..31479912,31480232..31480322
,31480563..31480631,31480821..31480898,31481045..31481134,31481305..31481355
,31481458..31481676,31481788..31481907

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31478527..31481907 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31478527..31481907 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTGCTTGTTTGTATGCCAGCTTTGAACCCAATAAACTCCCATATGACAAAGACAAAATTATTAGTCTTGTCAAGTCTTATCCCAGTGAATTCTCAAACTTTGATTTGGCACTTGAGGCGTCAGAACACAAAGGGTAAAGATCCTGGGTTTGCCACTGGCTGGGGTGGATCTGGTGTGACGCAGATACCCCAAAGCACTGAGAAGCCATTGAGGAAGCTCACTCTTGAGGACACGCGCCCCTTTGGCTGCACTAGCACAGATTTCGCAAGAACAGAGAAGAGTGAGGAGAGCAATGGAACAAGAAGCAGCAACAGCTTTGGCAGCCAAGCAAGAGGAAGTGGCGCAGCTCGGGGAGGAGATGAAGTGGGGTTCTTGCACCCGACACAGTTCCAGTCACTAGAACACAGCCAGACTAGTAATTGGACATTTGAAGTACCTGAATGTCCTCAGAGATACCTGTGGTGCAAAGACCATAAGCTTGCCATATCCACGGAGATCTTACCTAAGCTCTACCGTGCTGCACAGCATGCATACTCCAATTCAGCAGCAGCCAAGGATGGTTCATTCATGGAAACTGATCTGATGAGGCACAGCAAGGCACTGCTCATTCTTTGCCCTGACATGCTCACCGCATGGAACTCAAGGAAGATAGTGCTATCAGTGAATTATGATTTCACTAAGCTCAAGGATGAGCTGCAATTGTGTGCTCTGATCCTTTCATACTCACCAAAAAACGAAAGCACCTGGAGCCATAGGAGATGGGTGATCAAGAAGGTTTCAGAGCACAACCAGGATGTGTCGGAGCTTATAGAGATGGAATCTGTACTAGTGAAACAGATAGCAGAGAAATCAAAGATGAACTACCGTGCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTTCTGAATGAGTTAAAGAAATCTACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTTCACTACCGACGGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAAGATTCCCTTTATAGGAAGTCAGAAGTTCATTTACTGTGGAAGGAGGAACTGACGTGGAATGAGAAACTTATCAGGCGCTACCAAGGGAGAGAGTCTTTGTGGATCCATCGTAGGTTCCTCTCACAATGGTGGATGAAGTTCTTGGTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGAATGCCCCTGCCGATGAATTTGGTGAGGCGTGTGTCCAATCTGAGCTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCGGAGAGAAGTAGATTGTGGACGCATTTGATAGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MALLVCMPALNPINSHMTKTKLLVLSSLIPVNSQTLIWHLRRQNTKGKDPGFATGWGGSGVTQIPQSTEKPLRKLTLEDTRPFGCTSTDFARTEKSEESNGTRSSNSFGSQARGSGAARGGDEVGFLHPTQFQSLEHSQTSNWTFEVPECPQRYLWCKDHKLAISTEILPKLYRAAQHAYSNSAAAKDGSFMETDLMRHSKALLILCPDMLTAWNSRKIVLSVNYDFTKLKDELQLCALILSYSPKNESTWSHRRWVIKKVSEHNQDVSELIEMESVLVKQIAEKSKMNYRAWRHRCWLIPYMTREQVLNELKKSTRWNELHVADNCCFHYRRSLLLALLDSCHVEDTEDSLYRKSEVHLLWKEELTWNEKLIRRYQGRESLWIHRRFLSQWWMKFLVSSEETECAAGTSLVDLFLVQEIYLLSDCLNAPADEFGEACVQSELAALYILWISKQVPAVKLKLEERLHSLGSLEDVLARACPERSRLWTHLIA</aaseq>

Gene Sequence

<dnaseqindica>1..102#388..647#841..1128#1276..1386#1706..1796#2037..2105#2295..2372#2519..2608#2779..2829#2932..3150#3262..3381#ATGGCGTTGCTTGTTTGTATGCCAGCTTTGAACCCAATAAACTCCCATATGACAAAGACAAAATTATTAGTCTTGTCAAGTCTTATCCCAGTGAATTCTCAAGTATGTACATTATGAGACTTCGTTTCATTTTAATAACTTCGTTGAGGATATGCGAAGTGACAAGAGGTTCAAGGCGTAAAGATTGGTAAATTCATTTAATAACTTCACTGAGAGAGTCTTTTTTTAAGATTAGTGATTACCGACTATGTGATCGAGCGTTTCTGTGCTATGGAAAAGCGCCACAGTGATAAATGTGATTAAATTTCATCGTTTGTGCTATGTAAAACTTGATTCTAACTGTACTTTTCATAAATTAAGACCTTTGTTGTATTTATGTGCATGAAGACTTTGATTTGGCACTTGAGGCGTCAGAACACAAAGGGTAAAGATCCTGGGTTTGCCACTGGCTGGGGTGGATCTGGTGTGACGCAGATACCCCAAAGCACTGAGAAGCCATTGAGGAAGCTCACTCTTGAGGACACGCGCCCCTTTGGCTGCACTAGCACAGATTTCGCAAGAACAGAGAAGAGTGAGGAGAGCAATGGAACAAGAAGCAGCAACAGCTTTGGCAGCCAAGCAAGAGGAAGTGGCGCAGCTCGGGGAGGGTATCCTCCACCACTTTGAGCAAATCCTCCATCAAGACTCCCTCATGTAATCACATTTGGTTTCTCCATTCAAATTTCTCCCTGCACGCATTTTCTTGTCCTCACTTCTTGCATTCTGCAACACAATTTTTTTTTTGAAATTCAATTTCCTGCGTAATTTGGCTGTTTTTAACTCTCTGATGCATTCATGCAGAGATGAAGTGGGGTTCTTGCACCCGACACAGTTCCAGTCACTAGAACACAGCCAGACTAGTAATTGGACATTTGAAGTACCTGAATGTCCTCAGAGATACCTGTGGTGCAAAGACCATAAGCTTGCCATATCCACGGAGATCTTACCTAAGCTCTACCGTGCTGCACAGCATGCATACTCCAATTCAGCAGCAGCCAAGGATGGTTCATTCATGGAAACTGATCTGATGAGGCACAGCAAGGCACTGCTCATTCTTTGCCCTGACATGCTCACCGCATGGAACTCAAGGTAATGCTGTCAACCTATCACGGTATCGCTAAAAGATTGCATCTTTCATAGCTAGAAGGATGTGACTTTGATTAAGTTGGAAATAAGGTTCATCACTGCCTGGAAGGGATTCCACGTGGTTGTTTTATGCTTCTTTTCTTTTGGCAGGAAGATAGTGCTATCAGTGAATTATGATTTCACTAAGCTCAAGGATGAGCTGCAATTGTGTGCTCTGATCCTTTCATACTCACCAAAAAACGAAAGCACCTGGAGCCATAGGTACAGCTTGTCTTTTCACTTGTCAAGTTGTCAAATTATGGAATTTGGGGAAACTCTTTCAGGTCACCTCTTAAATAATTTAGGGATTTTTTAGGAAAAAAATGGATGCCTATGACCAACAGGTATGATAATCTTGAGATATATGCCCCATGATTATTTATGAGTTCATCTACATTTCAATACCTCCCATTCTTCCGAGGACCGCTGTAAAAAACTCGTTGGGGCTGGATTTTATTTGGGCAGCACAGAAATATTATGTTGATTTTGCCCATGCCCACACAGTTTACAGTTTAAACTTTAAATTGATTGCCTACTACAGGAGATGGGTGATCAAGAAGGTTTCAGAGCACAACCAGGATGTGTCGGAGCTTATAGAGATGGAATCTGTACTAGTGAAACAGATAGCAGAGGTCATACTTATAAATATTTACTTCTTTGGGATGTTAATAGAATTATTCCCATCTACTTTTCGGAACCTTCATTTCCTAGCAGATAATTATCCGAACTCATCATATTAGCATTTCACACAGTTCCTTATTTAACTGGTTATTAAATTACTTTTTTTTGCCGGGTGGTTATTAAATTACTTTGACATTTCACACTTGTAGTGATAAACAGTGTACAACAAGATAGTTTGATCCTTTATGCAGAAATCAAAGATGAACTACCGTGCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTATGGGTAAAGGAAAATCAAGCTGCTAAAAATTCTTTGTCCACTTTTCTTAATCTTATGTGCAAACTTCTGAGCACCACCATGGTAGCTAGGTTAGGACTTTTGTTATATTGCAAAAACCTTACAAAATTTCTGCCTGTCTGTTATCAGTTCATGCTTATCCTCATCAGCATCTAATTTCTGTTAAAGGTTCTGAATGAGTTAAAGAAATCTACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTTCACTACCGACGGGTTAGTCCCTGCCCTTATTTGTGTAGCTAGTACTAATTACTACTTCCAAAGCAAACTTGTATCCCACTCAACATTTGCATATTGAACAATTCTGTGGCATATCGTTTGAGCTGTCTCAAACATGTCATTTTATTGATTGTTTGCAGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAAGATTCCCTTTATAGGAAGTCAGAAGTTCATTTACTGTGGAAGGTATGTTGTATTTCATTAAAATCTATACCTGCTTCACTATGGTTCCCCTTGTGCCATCTTTCCCTCTGTTTTTCATTGTACATCTGTTACAAAGGAAAAACTCGCCTGTGCATTTCATTTTATTTGAGAAACACAAATTACTCTGGTGCTTGAGTAATTGCATCTGACAGGAGGAACTGACGTGGAATGAGAAACTTATCAGGCGCTACCAAGGGAGAGAGGTTTGAAGTTTGCCCATCATGATTGTGACATTTTTATGTTAGTGCCATAATTTCTAGTGAATGTTGTTCCCCTATGTTGATTGTGCTAGTGTGTTGGTGTAGTCTTTGTGGATCCATCGTAGGTTCCTCTCACAATGGTGGATGAAGTTCTTGGTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGAATGCCCCTGCCGATGAATTTGGTGAGGCGTGTGTCCAATCTGAGCTTGCAGCCCTCTACATTCTCTGGATATCAAAGGTAACCCCATATAAACGTTTGAAACTAAAACAAGTGATATATCCTCCTCTTCACGAATGATCAACATTTGAAAAAAAAAAAAACTAAGCATGGGCATGTTGTTACTTGCAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCGGAGAGAAGTAGATTGTGGACGCATTTGATAGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004218

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004218&oldid=41942"