BGIOSGA004232

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Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004232| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004232, complete gene.| tag = P0519D0...")
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Gene Name

BGIOSGA004232

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004232, complete gene.

LocusTag

P0519D04.18

Ensembl Transcript ID

BGIOSGA004232-TA

Ensembl Protein ID

BGIOSGA004232-PA

Length

3026

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31628069..31631094

Sequence Coding Region

31628069..31629605,31629869..31629894,31630363..31631094

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31628069..31631094 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31628069..31631094 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAGAGTCTTCTACCAACAGATTTTGTAAGAAGGTAGATTTAGAAGTTCTGCCAAGCAGAAGTGACGTTGGAGAATCATCTTACCACAAGCACTCCCTATGGATGGCACATTGGGCCAGATCAAGCATCAGTCCAGAACCTCAAAATGGCCAGAGCTGTAGCCCACTTAAGGAAATTGATGATGTTGGCTATTCAAAAGATTGCGGGGCTTTACCTTTTGAGCTCATGAAAGCTAGAGTAGCTGAAAGGTTGATGGTGGGAGTGAGCCATGGAGGTGTCTCTGCAGGAAATACTCGGCAATTCAGTACTAATATGAGGGGTGTAGCACGTGATGTTTGCCAAGAAGTTCAATGCAAGAATGTTGATCAGATGGGTAGCTCCTTTGAAAGTTCTGTGATGCAGAAAAATGTGAACTTATATGCTGCTAAGACGGTGGTATCTGAAAGATATTCTGTTCATAAGATATCTGATATATTGGTGGATTCTCGTAAACTTTGTGGCACTGAAAATCTGAGTTCAGAGTGGAATCACTTTCCAATGTTTGAAATCAACAGGAAAATCGACAGTATTCTTAACCCAAGGCGGTCTGCGTTGGTCACATCATCTGAAAAGATTTTTGTACCACAAAAATCAGTGAAGATAAATATGTCTACGTCTAATGTGATGTCATTTTCATCAAAGGAATATCAGCTGCACACACATCAGGTAACTGATGAGAATAGGCAATGCAAATCTGCAAGGGGCATGCTATCTCATCTTGATAATTACACTGGCCTCAATTCTGACCATGCAGGGAAAAAGCTGAAAGGCCATTTATCAATTGAAGAACCATGCTCTTGCAGCAAGGATGACACTGACTCATCATGTTCATTAGCAGACGAGCACCATGCTCGCCATTATATCCCAAATTCAAAGAAGTCACCTCATCGGTCTTGCAAGAACAGTTCTGTGTATTCAGCGAGCAAAATGGAAAATCAATTTGTTGAAGGTTCTTTGTTGGAACATAAATCAGAAGTGTATGGAGCATGCAAAAAGAAACAGCATTTAGAGGGAGTTGCTTTCCATGAGTCTGCACTGCATAGAGAACATGAAATCAAGTCAGTTAAAACTACTGCCATTACCAACGAGGGTGATATGGACACTAATGGCCATCATGTGGACTTTGGTAATTTGTTACAAAGTGATCAGCAGTATCTGAATAAACACACAGAAGATTCTGCAGTGAATTTGACAGAATCCTGCAAGACACCTGATGCAATTGATAGTGCAATGATACTGAAGAGCAAGGACGAATCCCTGGCCCAAGAAAAGAGAACAAACAACAAATTGATAGATAACAAACGGAAGGGTCCCTGCTTATTTGAAATGTTTACACAGCCTACGAAATCAAATGTCAAATGTTCCATAGATCGAACATCTTCAGGGAAATCTTGTGGTAACATGACCAGTGGTTTATTGGGAGCACAGAAACAGTTTTCAACTAAAACTGATACCTTTTACAGTGAAGCTCACCATGCATCAAAATCTACAGCAGGATTTGCTTCAGCATCAATGCAAAAGGACTTGGGTTATCCATTCTCTGCAAAAACTGAACAGTTAGTGACTTCATCAGTTAAAGGAGTATCAATCGGCAGTAAAGGAAATGAAGCAGTCAACACGAGTGCAGAACACCGCGACTTCTATCCAAAAGCAACTTGTGTCAACAATCAAGAATGGAGCATGTCAAAGACATCAAGCATGAACTTAGATTTAGTTCTTTTCCAAATAAGCAGACTGAAAAATCCAATTCCTAATGCTTTAAATGAGTCGCCAGCATGTCCAGATCCAAGTGAGAAGTGGCTGAAACGCCTGCAACATGATACCTCAGACTCTCATGTTCCTTGTTCCAAGAAACCAAAGGTTGGAGATGGTCCATTGGCTGGAGGAACATGTACTGTGTTTGGTCAAGTGTTTGACTGTGACAGCGACAGTACTGGCATGATCAACCATGTGAAGAACAAATTAATATGTAAAGGACTCACTGATCAACAAAGCCAAGAAGGTTCTCCTATGTCAGCAAAAAGTCTTAATCGTTGGATAGGAAGATGGTGCAGAGGAGGCACCCCTGTTTTTCATGGAACTTCAAATCTAGAAAGACAGGAAGCCAAGTCTGGCATGCCATCGGATGATCTTGAAGGTCAGTTTCCAAGCATCGCAGCAATGGCGATGATGGGGCGTGTAATGAACAAGCTCCGGCCATGTGAACTTCAGAAGAGGGGTCCCTCTGTAGTCTGGAGGACAGAGGGGCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MPESSTNRFCKKVDLEVLPSRSDVGESSYHKHSLWMAHWARSSISPEPQNGQSCSPLKEIDDVGYSKDCGALPFELMKARVAERLMVGVSHGGVSAGNTRQFSTNMRGVARDVCQEVQCKNVDQMGSSFESSVMQKNVNLYAAKTVVSERYSVHKISDILVDSRKLCGTENLSSEWNHFPMFEINRKIDSILNPRRSALVTSSEKIFVPQKSVKINMSTSNVMSFSSKEYQLHTHQVTDENRQCKSARGMLSHLDNYTGLNSDHAGKKLKGHLSIEEPCSCSKDDTDSSCSLADEHHARHYIPNSKKSPHRSCKNSSVYSASKMENQFVEGSLLEHKSEVYGACKKKQHLEGVAFHESALHREHEIKSVKTTAITNEGDMDTNGHHVDFGNLLQSDQQYLNKHTEDSAVNLTESCKTPDAIDSAMILKSKDESLAQEKRTNNKLIDNKRKGPCLFEMFTQPTKSNVKCSIDRTSSGKSCGNMTSGLLGAQKQFSTKTDTFYSEAHHASKSTAGFASASMQKDLGYPFSAKTEQLVTSSVKGVSIGSKGNEAVNTSAEHRDFYPKATCVNNQEWSMSKTSSMNLDLVLFQISRLKNPIPNALNESPACPDPSEKWLKRLQHDTSDSHVPCSKKPKVGDGPLAGGTCTVFGQVFDCDSDSTGMINHVKNKLICKGLTDQQSQEGSPMSAKSLNRWIGRWCRGGTPVFHGTSNLERQEAKSGMPSDDLEGQFPSIAAMAMMGRVMNKLRPCELQKRGPSVVWRTEGL</aaseq>

Gene Sequence

<dnaseqindica>1..1537#1801..1826#2295..3026#ATGCCAGAGTCTTCTACCAACAGATTTTGTAAGAAGGTAGATTTAGAAGTTCTGCCAAGCAGAAGTGACGTTGGAGAATCATCTTACCACAAGCACTCCCTATGGATGGCACATTGGGCCAGATCAAGCATCAGTCCAGAACCTCAAAATGGCCAGAGCTGTAGCCCACTTAAGGAAATTGATGATGTTGGCTATTCAAAAGATTGCGGGGCTTTACCTTTTGAGCTCATGAAAGCTAGAGTAGCTGAAAGGTTGATGGTGGGAGTGAGCCATGGAGGTGTCTCTGCAGGAAATACTCGGCAATTCAGTACTAATATGAGGGGTGTAGCACGTGATGTTTGCCAAGAAGTTCAATGCAAGAATGTTGATCAGATGGGTAGCTCCTTTGAAAGTTCTGTGATGCAGAAAAATGTGAACTTATATGCTGCTAAGACGGTGGTATCTGAAAGATATTCTGTTCATAAGATATCTGATATATTGGTGGATTCTCGTAAACTTTGTGGCACTGAAAATCTGAGTTCAGAGTGGAATCACTTTCCAATGTTTGAAATCAACAGGAAAATCGACAGTATTCTTAACCCAAGGCGGTCTGCGTTGGTCACATCATCTGAAAAGATTTTTGTACCACAAAAATCAGTGAAGATAAATATGTCTACGTCTAATGTGATGTCATTTTCATCAAAGGAATATCAGCTGCACACACATCAGGTAACTGATGAGAATAGGCAATGCAAATCTGCAAGGGGCATGCTATCTCATCTTGATAATTACACTGGCCTCAATTCTGACCATGCAGGGAAAAAGCTGAAAGGCCATTTATCAATTGAAGAACCATGCTCTTGCAGCAAGGATGACACTGACTCATCATGTTCATTAGCAGACGAGCACCATGCTCGCCATTATATCCCAAATTCAAAGAAGTCACCTCATCGGTCTTGCAAGAACAGTTCTGTGTATTCAGCGAGCAAAATGGAAAATCAATTTGTTGAAGGTTCTTTGTTGGAACATAAATCAGAAGTGTATGGAGCATGCAAAAAGAAACAGCATTTAGAGGGAGTTGCTTTCCATGAGTCTGCACTGCATAGAGAACATGAAATCAAGTCAGTTAAAACTACTGCCATTACCAACGAGGGTGATATGGACACTAATGGCCATCATGTGGACTTTGGTAATTTGTTACAAAGTGATCAGCAGTATCTGAATAAACACACAGAAGATTCTGCAGTGAATTTGACAGAATCCTGCAAGACACCTGATGCAATTGATAGTGCAATGATACTGAAGAGCAAGGACGAATCCCTGGCCCAAGAAAAGAGAACAAACAACAAATTGATAGATAACAAACGGAAGGGTCCCTGCTTATTTGAAATGTTTACACAGCCTACGAAATCAAATGTCAAATGTTCCATAGATCGAACATCTTCAGGGAAATCTTGTGGTAACATGACCAGTGGTTTATTGGGAGCACAGAAACAGTTTTCAACTAAAACTGATACCTTTTACAGTGAAGCTCACCATGCATCAAAATCTACAGCAGGTGAGACTTGCTATTATACAATTTAGTCTCAGTTAAGACTTTTTTTTTTTGGAAAGTCTTAGTTAAGACTTTGAGCCCCCCCCCCCCCCCCCCAGGGCTCACATGGATGGTGAAAAAGCCAAAAACTATTTTCTCCAGGCTATTTTTGTGTCACATGTTGCTACTTGTTAATGTCAAAATGCAGTTTAATTCAAATGAAGAATATATTGTAACAGCTTTAATCAAATATTAAATGATATGATTGTTATGTTTTCTTTTTGTAGGATTTGCTTCAGCATCAATGCAAAAGGTATTAGCACTCCACAAGTCCACATTACATTTTGTATCAGCTTAGTTTATGCAACTATAAACAAGTTCAGGCAATCAGTGAAAAATATCATGTGGGAAAGCATGAAATATTTTAAAATCCATGAAGAGAATGTGTCTTACTTTGTACGTGCCTGCAACATAAATCAACATTCCAATGTCTACCTTCAAGAATACAACTCAATTTGCTTAGTCGCAAGTTAATCAGCTTATTCCATTTCAGAGTTTAAAAGCATTGCAGGCTCACAAGTGTGTTGCCTTTATGGATGTTGCAGTTTCTTATTATGAAATAACCTAAAGTCCTAAAATACGTCGATAAGATCACAAAGCCAGTTATACTCTCAAACGGTTTTGTCAGAATCTGAACATATGTAGATGTGTTGATGCGCAACATATCCTAAACTTTATACTCTTTTTTATATGTTATCAATATGTAACAATTTTTCCACAGGACTTGGGTTATCCATTCTCTGCAAAAACTGAACAGTTAGTGACTTCATCAGTTAAAGGAGTATCAATCGGCAGTAAAGGAAATGAAGCAGTCAACACGAGTGCAGAACACCGCGACTTCTATCCAAAAGCAACTTGTGTCAACAATCAAGAATGGAGCATGTCAAAGACATCAAGCATGAACTTAGATTTAGTTCTTTTCCAAATAAGCAGACTGAAAAATCCAATTCCTAATGCTTTAAATGAGTCGCCAGCATGTCCAGATCCAAGTGAGAAGTGGCTGAAACGCCTGCAACATGATACCTCAGACTCTCATGTTCCTTGTTCCAAGAAACCAAAGGTTGGAGATGGTCCATTGGCTGGAGGAACATGTACTGTGTTTGGTCAAGTGTTTGACTGTGACAGCGACAGTACTGGCATGATCAACCATGTGAAGAACAAATTAATATGTAAAGGACTCACTGATCAACAAAGCCAAGAAGGTTCTCCTATGTCAGCAAAAAGTCTTAATCGTTGGATAGGAAGATGGTGCAGAGGAGGCACCCCTGTTTTTCATGGAACTTCAAATCTAGAAAGACAGGAAGCCAAGTCTGGCATGCCATCGGATGATCTTGAAGGTCAGTTTCCAAGCATCGCAGCAATGGCGATGATGGGGCGTGTAATGAACAAGCTCCGGCCATGTGAACTTCAGAAGAGGGGTCCCTCTGTAGTCTGGAGGACAGAGGGGCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004232