BGIOSGA004233

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Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004233| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004233, complete gene.| tag = P0519D0...")
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Gene Name

BGIOSGA004233

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004233, complete gene.

LocusTag

P0519D04.22

Ensembl Transcript ID

BGIOSGA004233-TA

Ensembl Protein ID

BGIOSGA004233-PA

Length

3541

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31644578..31648118

Sequence Coding Region

31644578..31644703,31644808..31645005,31645085..31645187,31645922..31645992,31646077..31646181
,31646629..31646662,31646873..31646973,31647630..31647689,31647746..31647943
,31648026..31648118

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31644578..31648118 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31644578..31648118 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCTGCTCCCCGCCGCTGCTGCGCCGCCTCTTCTGCCGCGCCGCCAAATCCGCCTCCGCCGCCGGCGCCGGCGCCGGCGGCACTAGCAAGAAGAATATCGTCTTCTTGGGCTCCCCCCAGGTAGCCGCCTCCGTCCTGGAAACTTTGCTGGTGGCGTCGGAGTCGCCGGACTCCTCATTCCAGGTTTCCGCCGTCGTGACGCAGCCGCCGGCCGCCAAGAACCGGGGGAGGAAGCTGATGCCGTCGGCCGTCGCGCAGCTCGCGCTCGACCGCGGGTTCCCCGGCGACCTCATCTTCACCCCGGAGCGCGCTGGAGAGGAGGCGTTTCTGTCAGACCTGAAGGAGGTGAGACCAGAGCTCTGCATCACTGCTGCCTATGGAAACATTCTGCCTCAGAGGTTTCTTGATATCCCGCCTTATGGAACTGTTAACATACACCCGAGTTTGCTGCCTCTATATCGTGGTGCAGCACCTGTGCAGAGGGCATTGCAGGACGGTGTTGAAGAAACAGGTGTTTCCCTTGCATATACTGTCCGTGCCTTGGATGCGGGTCCAGTTATTGCTTCTGAAAAGTTTGCTGTAGATGAGTATATTAAGGCACCGGAGCTGCTTGCTATATTGTTCAACTTAGGATCCAAGCTATTGCTTCATGAACTACCCTCTATTCTTGATGGAACGGCTAAAGAAAAGGCAAAACCACAAGATGACTCCAAAATTACACATGCACCGAAGCTGAATTCTGATGAGTCATGGTTGTCATTCAACCAAGAAGCTAAATTGCTCCATAACAAGGTACGAGCCTTTGCAGGTTGGCCAGGAACTCGCGCAAAGTTGCAGCTTGTGAACCAAAATGGGGAATCCGATGTGCTTGAGATTAAGGTTATCAGCACGAAGGCTTGCGCATCCTGTGACAAAACCGGAGATGGAAATGAGGTACTCTTCTCGGGGAACTCATTGCTGATTCCTTGCGGTGGATCATCTTGTCTCGAGGTCGTGGAGCTTCAACTCCCTGGAAAGAAGGTGACGACAGCAAGGGACTTCTGGAATGGTTTGCGTGGTCAGAGGCTGCTGAAATCACCATAG</cdnaseq>

Protein Sequence

<aaseq>MARCSPPLLRRLFCRAAKSASAAGAGAGGTSKKNIVFLGSPQVAASVLETLLVASESPDSSFQVSAVVTQPPAAKNRGRKLMPSAVAQLALDRGFPGDLIFTPERAGEEAFLSDLKEVRPELCITAAYGNILPQRFLDIPPYGTVNIHPSLLPLYRGAAPVQRALQDGVEETGVSLAYTVRALDAGPVIASEKFAVDEYIKAPELLAILFNLGSKLLLHELPSILDGTAKEKAKPQDDSKITHAPKLNSDESWLSFNQEAKLLHNKVRAFAGWPGTRAKLQLVNQNGESDVLEIKVISTKACASCDKTGDGNEVLFSGNSLLIPCGGSSCLEVVELQLPGKKVTTARDFWNGLRGQRLLKSP</aaseq>

Gene Sequence

<dnaseqindica>1..126#231..428#508..610#1345..1415#1500..1604#2052..2085#2296..2396#3053..3112#3169..3366#3449..3541#ATGGCGCGCTGCTCCCCGCCGCTGCTGCGCCGCCTCTTCTGCCGCGCCGCCAAATCCGCCTCCGCCGCCGGCGCCGGCGCCGGCGGCACTAGCAAGAAGAATATCGTCTTCTTGGGCTCCCCCCAGGTACCCCCACCCCCACCCCCCAGGCTGTTCTCCACCTCTCGGTTCGCCAACTCCCGTGCTCCGGTCTGTGGTCTGATCCAAGAGCTCGGCGTGTCGCGCCTCAGGTAGCCGCCTCCGTCCTGGAAACTTTGCTGGTGGCGTCGGAGTCGCCGGACTCCTCATTCCAGGTTTCCGCCGTCGTGACGCAGCCGCCGGCCGCCAAGAACCGGGGGAGGAAGCTGATGCCGTCGGCCGTCGCGCAGCTCGCGCTCGACCGCGGGTTCCCCGGCGACCTCATCTTCACCCCGGAGCGCGCTGGAGAGGTACTACCTTCTAAATCGTTCTCTGGGAAAACTCGCATTGAGGCTACAATGGTGTTGAGTTGCACGAGGATTAATGCAGGAGGCGTTTCTGTCAGACCTGAAGGAGGTGAGACCAGAGCTCTGCATCACTGCTGCCTATGGAAACATTCTGCCTCAGAGGTTTCTTGATATCCCGCCTTATGGTACGTCTGCCTGCCAAAGCATCAGCTTAGCCAATTCTCTCGTACTGTTTGATTGCTCTGGTGCGCAACGAACATGTACCGTCTCATGCTCAAGCAGAAATAGTTCTCTTGGCTCCTTTCAAAAAAAGCTCTCTTGGAAATTTACTGGTACTCGTAAAGGAAGTCGTTTAGTACAGCGACACGGTCTTTAAAACATAACTTTGACTTCTTGTTTCTATAAAAATATTTATTGAAAAGTGATATATGTATACTTTATGAAAGTATTTTTCAAGACAAATCTATTCATATAATTTTTACATTTTCAAACTCAACAACTTGAGAGTTATTCATGATTTTTATTCTTAAGGTTTGACTTAAACATTGTCCTAAACGACTTCCTTTACGAGTACGGATGGAGTATTGACTAAGCAACTGGGGACTTCTGCTTTCCTGCTACAATCCATGTTCAGTTGTCTGTGAATGGCTTATATTCCTTGAATACGCACTTGTCAAATTAGATGCAAAGTAACAAACCAAAACTGGATAACTTATAGGAGAACCAATGTTAACCGGTTGGTCTTCTGTTTCCAGTCTATAAATTGCCAAAACCAAACGTGATAACTTCTGAGTTCATAGTCAACCTTATAATTGGTGCTAAAAGCAGCCTACTTTGCCACAAATCAATATGGGACATGTTGAATTTTGTCTACTGAGTGCTGAACATTGACTATTTGGCATTTCTATCTTCATACCAGGAACTGTTAACATACACCCGAGTTTGCTGCCTCTATATCGTGGTGCAGCACCTGTGCAGAGGGCATTGCAGGTTTTAATGATCTACCTGTTACAACTATGATCCAGTGAAGCTATTAGCTGTGGAATATTTTATATTTATCAATTTTAACTGCAGGACGGTGTTGAAGAAACAGGTGTTTCCCTTGCATATACTGTCCGTGCCTTGGATGCGGGTCCAGTTATTGCTTCTGAAAAGTTTGCTGTAGATGAGTATATTAAGGTAGGTGGTTCTAACTGTCTTGCTGGTTTTATTATCATCTTGACAGTTTAAATTTATAGAACAGAAGTCAACCATTGCTTGAATGAAAATATACATGGGCCTCTCCATGCTATTCAGTCATATAACATAAGCAAGACTATATGTAACTGCACTTTTATTGTAAGTTTCTAGTTAATGAAAATGCATGAGAACTCATGGTAAAAAAAAAGAAGCATGACAATGTTGATAATTTTGGTCCATTATAGACTATTGCTATGTGGTTGTAATTTTAGTGATGATGAATATGAACAATCGCTTGGCCATTATTCAAGTAGCATACTACGCTGATACCTCCACAATTTTCCTCAATATTTATTAAAGGAGCTCGTTTAGTTCAAATTATAAACTGGAGATAATTTAAGTGTCATAAAATATACTGATCGTTTTTGTAACTTTCTTCATATGCAGGCACCGGAGCTGCTTGCTATATTGTTCAACTTAGGTAAAGACTATAAACTAATCACTATGTGTTATTAATGGTCATATTTCTAGACAGCTTATTCCTAACTCTTTTTCTGGTAACTATGATTAGTTGATTATACCTACCAAGGAACAGACCTTATTTCAAATTTTTGATACTATCTTTTTCTAAATATGGTTCTGAGCTATATGATTTTGAGATTTTTGTAATTTGGATTCTTGTGTTAAATAGGATCCAAGCTATTGCTTCATGAACTACCCTCTATTCTTGATGGAACGGCTAAAGAAAAGGCAAAACCACAAGATGACTCCAAAATTACACATGCACCGAAGGTATGCATAGGATGGCAATATTGAATTGGAGGCCACCGAATTCAGACTTAGAACTATAGCAGTGAGAATTATACGAAAAATCACTGCTATAATTCTCACTCAACTGAACATGCGCAAAACAAATAAGAACACTTGAGCATAGCTACATGAGCCTTTGTCATACGTCCTGCCTGCAGTTTAGTTTTTATTTTACATTTGATACTTCATTTGAAACTGCTTAAATCTATCATAGTTTATTTTCAAATATTTATACCGATTTGTTGCATTTATTTATTCCCTCTTTTCTTACAGTTTGTATGCCATCATTTTGGGAACTCCACCCTGCATTTCTAATGTTGATATACACTTTCTAGGATTGTGCTATACTGAAGCTTATATTTCCTTTTATATTTGGCTTTGTATATGTTTATGAAATCTGAATCACGCTGTTGAACCCTCTACTATAAATGAGACCTGGAGCCCAAAATTCCAAAGTTATAAGCACTCTGCAGGAAATTCCAAATCTACACTCAAATGGTTCTCTGCAGATAGTTATACCTAGCTAATTTATCATGATGGCCTCTGTTTTCCATCTGAATTTTAGGAGTCCAGCATTCAAATGATACTGTACACTTCGGATATCCCAAGGTATTTATTATGGAAGTTCTGTTTTCCAGCTGAATTCTGATGAGTCATGGTTGTCATTCAACCAAGAAGCTAAATTGCTCCATAACAAGGTGAGTTCCTTATTTCCAGCATACTCATCCATGCTATTGCCAACCAACTCTGGTAGGTACGAGCCTTTGCAGGTTGGCCAGGAACTCGCGCAAAGTTGCAGCTTGTGAACCAAAATGGGGAATCCGATGTGCTTGAGATTAAGGTTATCAGCACGAAGGCTTGCGCATCCTGTGACAAAACCGGAGATGGAAATGAGGTACTCTTCTCGGGGAACTCATTGCTGATTCCTTGCGGTGGATCATCTTGTCTCGAGGTTTGTATTCCAGCTTACAGGTTACGAATATGTTTCTTTCCTTGTGGCCTTCTCCAAGTTCACTCTGATGTTTTATGGTTAGGTCGTGGAGCTTCAACTCCCTGGAAAGAAGGTGACGACAGCAAGGGACTTCTGGAATGGTTTGCGTGGTCAGAGGCTGCTGAAATCACCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004233

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004233&oldid=41957"