BGIOSGA004246

From RiceWiki
Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004246| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004246, complete gene.| tag = P0034C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004246

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004246, complete gene.

LocusTag

P0034C09.18

Ensembl Transcript ID

BGIOSGA004246-TA

Ensembl Protein ID

BGIOSGA004246-PA

Length

4028

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31855092..31859119

Sequence Coding Region

31855092..31855172,31855410..31855556,31855669..31855736,31856415..31856472,31857118..31857228
,31857312..31857362,31857952..31858095,31858214..31858309,31858425..31858496
,31859036..31859119

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31855092..31859119 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31855092..31859119 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTGGGATCTGTGGATCTCTAAGTTGAAGGAGGGCCAGCACCTCGCCGAGCACGAGCTCCAGTCCCTCTGCGAATACGTGAAGGAGATCCTCATCGAGGAGTCCAACGTGCAGCCAGTGAACAGCCCGGTGACCGTGTGCGGAGACATCCATGGGCAGTTCCATGACCTGATGAAGCTCTTCGCGACTGGGGGGCATGTGCCCGAGACGAATTATATTTTCATGGGTGATTTTGTAGACCGCGGCTTCAACAGTCTGGAGGTCTTCACCATTCTGTTGCTACTAAAAGCGAGGTACCCTGCACACATAACGCTTCTGCGTGGAAATCATGAAAGCAGACAGTTGACACAGGTGTATGGTTTCTACGATGAGTGCCAAAGGAAGTATGGGAATGCGAATGCATGGCGGTATTGCACCGATGTTTTTGACTACCTTACTCTTTCAGCAATCATTAATGGCACGGTTCTTTGTGTTCATGGTGGACTTTCTCCTGATGTGCGCACTGTTGATCAGATTCGGACGATTGATCGCAATTGTGAAATTCCTCATGAAGGTCCTTTCTGTGATCTAATGTGGAGTGACCCTGAAGAAATAGAGACATGGGCTGTTAGCCCTCGTGGAGCAGGTTGGCTTTTTGGATCACGAGTGACAGCTGAGTTCAACCATATTAACAATCTCGATCTAGTTTGCCGAGCTCACCAGCTGGTTCAGGAAGGCTTAAAGTACATGTTTCAGGACAAAGGCCTTGTAACTGTGTGGTCCGCTCCTAATTATTGCTACAGATGTGGAAATGTTGCTTCTATACTAAGCTTCAGTGAGACAATGGAAAGAGAGGTCAAATTCTTCACAGAGACAGAGGAGAATAACCAGATGCGAGGACCGAGGACTGCTGTCCCATATTTCCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MDWDLWISKLKEGQHLAEHELQSLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFATGGHVPETNYIFMGDFVDRGFNSLEVFTILLLLKARYPAHITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIINGTVLCVHGGLSPDVRTVDQIRTIDRNCEIPHEGPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTAEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFSETMEREVKFFTETEENNQMRGPRTAVPYFL</aaseq>

Gene Sequence

<dnaseqindica>1..81#319..465#578..645#1324..1381#2027..2137#2221..2271#2861..3004#3123..3218#3334..3405#3945..4028#ATGGATTGGGATCTGTGGATCTCTAAGTTGAAGGAGGGCCAGCACCTCGCCGAGCACGAGCTCCAGTCCCTCTGCGAATACGTGAGCTTTCCTCCCCCCGCCCTGTCCCCCGATTGGTTCGGTTATTAGGGTTTTTGCCATGCCCCGTGCTCTCGCGCGGCGGCGGCGGCGGCGGCGCGCGTGCGGTTGCTAGGGTTCGTTGGTAGGGGGTGGACGTGGGGGGAAACCGTTGCCTTTTGCTTTCCGTACTGAACTTGAGTTTTGTTATGTATATGGGGTCGCGTGTAACCGCGGCTGATTTTCCGCTGATCCTTCCAGGTGAAGGAGATCCTCATCGAGGAGTCCAACGTGCAGCCAGTGAACAGCCCGGTGACCGTGTGCGGAGACATCCATGGGCAGTTCCATGACCTGATGAAGCTCTTCGCGACTGGGGGGCATGTGCCCGAGACGAATTATATTTTCATGGTGTGGCTTCTGGAGCATTTTGTGTTTATGTGTTTCTGTGTGTGTGAGCTTGTTGGTTGAGATGGTTCTGGATGATGCTGTGTTCCTGAATTCAGCTGTGCTTCACGTGCAGGGTGATTTTGTAGACCGCGGCTTCAACAGTCTGGAGGTCTTCACCATTCTGTTGCTACTAAAAGCGAGGTATTTGTCTACCTTTTTGTTTGGGATCGTGAATGTTCTGTTTGTTTGTTCGAAAGCTTTGACCTTTCTGGCACATAGCTGCAGCTGCTTCACTGTTCCGTTTGGTATTACAGTACTTCGATGTTATATTACCTTTTTCTACAGGGACATTACATGAAAAACGATGTGAATGGTTGCAGCAGTAGTTTACCTTCCTTAGATGTGAATCATGTTGTTGTATGGTCCTGCCTGTCGTTTGATTATATGCCAAATCCTGTTGTCTTTTCATTACTGCCTTCTCCCCTTATTTTGCCTGGATAACCTTGAGCAATGTATGGGGTCAATGTGTTGTTCTATACTTCTATATAATACAAATAGCTCCCAGGAGTTGAACTGAAATGCTGAATAGTTGTAGGATGAGACACACTGTGTGATCTAATTGTGGCTCGTGCAATTGAGCCTAGTTGGCTGAATTTTGAAATTGGTATTCCTGTTGTTGTTTCACAACTTGGACTGCTAATTTGAGTAGAATGGTTGCACTGTTAAGTAGTGAACAATTCCTGTAAGACTCCCTAGTCCTTGCTAGTTTCATTTGTTCTTGGTTGCACTCATTTTCTCAAGGATTCTGATTTATAGTTTGTACCCAAGTGTTACTATCTGTGGCTCATTCTTGCTATTGGGTTTCCTGATTGTGATTAGGTACCCTGCACACATAACGCTTCTGCGTGGAAATCATGAAAGCAGACAGTTGACACAGGTATTTCCTGGTGCGGACAATGTTTTCATTTATTATCCAATTTATTTCTTTTCTTGAGATTTGAGATACTTATGTTGCACTTTTAAGTGTTGTATCTCAACTGCTCTGATGATTTATATGTTGTATCTCAACTGTTGCATCCAAGAGGTCCTGTTTTAGTTGTTTGTTGGCCTGTACATGCATGTATGCTCATATCAAACATTTGTAGGTTTTATATTAATTATCTATGAGGGTATCATGCGTTGGACATAAATATGCATAGCTCCATTACATACTGTTCTGATTCTGGAGATGTATTAACTCGTATTGCTTTTCTGCCTGAGCAATGTCAAATAATCCGGTCATTATATCTATGATTTTCCCTTGGTTTCATGTTCGTTTCAGTGTATGCACATTGGAATGAAATACACGCACATGTTGCATACTAGTGTATCTTTAGTTCCTAATCAGCACCATATGATGAGCAACCTGTGTTGTCATCCTTAGATTTTGTTTAATGAGTTGGAATATGTTTTTTACATGGTTCCTTACGTTTCCTTTATTTGTACAGTTCATCCTCCTGACAGACTTTGTGCTCATATATCTGCACTACACATGTATTTGGTGCTTATGATGCAGTAACACATAGTATTTTTCTAATTTTAGGTGTATGGTTTCTACGATGAGTGCCAAAGGAAGTATGGGAATGCGAATGCATGGCGGTATTGCACCGATGTTTTTGACTACCTTACTCTTTCAGCAATCATTAATGGCACGGTAAGTTTGTTTGGACATTTTGTAAGTTGTCGGTTTATAATTTTTGTGCCAAATAATCATCAAACCATATGCTAAAAATCCAGGTTCTTTGTGTTCATGGTGGACTTTCTCCTGATGTGCGCACTGTTGATCAGGTTTGCTGAACTTCTTTTCTTGAAGTTTCATAAGCATCATTAAGTCTAAGTGTTGTTTATCAAACTCTAATTAATTGTAATACTAACATTATTATTTTGAGTTACTGTACTACACCTTGTCGATGCAACAATTAGTAGGTCTGGCACTAAGTTCAAAAGAATTAGATAATTCTGCCTTTTAAGTATGAATATCCTCAGTTGATCAGGTGATATCCGTTGAACCTTTTGAAGGGGTAAACAACTGGGTGTTGCCATTTTAGATAATTTGTTGAAATAGTGTATGCTATTTTCAGTGACACATATATCTCTGACCCATCCTTTAAAGAAAAAATAAATGGTTGTTCGCTAACTTAGTTGTGGTATACTTTTCTTTGTCGTTAAAATATATACTTTATATCTGACTGTGTACTATTAGAAATTAGTTGGTTCATAGCTTTGCATGTTCACAATTTTTTAGTAAGACATGATTCTGTGATTTGTTTTATCTTAAGATATATTGTTGTCAGATAAGAATTAAAAACCGTCTCAACGCAATATTACAATGAAATTAATCATGTGATTGAATATCCTTGTTAATTCTATTGACCAGATTCGGACGATTGATCGCAATTGTGAAATTCCTCATGAAGGTCCTTTCTGTGATCTAATGTGGAGTGACCCTGAAGAAATAGAGACATGGGCTGTTAGCCCTCGTGGAGCAGGTTGGCTTTTTGGATCACGAGTGACAGCTGAGGTATGTACAGTCATTTGATGATTTCTTACTCTATTTTTCAGAGAGTGTGTACAGTCACTACATTCTGGATCATCTATTAATTGTTTCCTTGTAAATGTTTTTCATCTACCTTTTGCAGTTCAACCATATTAACAATCTCGATCTAGTTTGCCGAGCTCACCAGCTGGTTCAGGAAGGCTTAAAGTACATGTTTCAGGACAAAGGCCTTGTAACTGTAAGTTTCTGTTCACATGTCAGTCCAGATAATCATAGCATTGTACTAAGCTTGTATTTCTTTTTTCAATACTGTTATATTGATGCTCACATACCCTGCAATACCTTTTTTCCAGGTGTGGTCCGCTCCTAATTATTGCTACAGATGTGGAAATGTTGCTTCTATACTAAGCTTCAGTGAGACAATGGTATGTTGTGCACCTGTGGTGGAAGCATTATGTAATTGCATCAAACTTCATATAGGAGTACTAGGATTTGCTAGTGCACTTGTGCACACACAATACAGAGATGAAACAGCGCTAGGCACCCAACTGCTTTTGTGTGCTCAACAATAACAAATGCCACCCCATGCTATCTATAATCTACTCAGCAATGAATTAACGATACACAGCACTTTGGTTTGACTACTGATTGGGGGAGACTTAAGTTGGACTCAAGAGCAACTAGCATATTCGTTTCTAGTTGTGTAACTGTGGCCACCTCAATAAACCATTCCTCAGGGAATAGAAGTTCCAATTGAACTTAGCTCATCTACAAGTACTGGAAGATTTCTTGCTACTAGTGTGAAATTGTTATCTTATCTGTGGTCTGACTCTTGCATTAGTTGATCTGAATATGTTAACATGTCTTCTTTTGCAAATACTGCTGTGAAGTATCTGATTTGTTTCATGAGCTCTAAGGCTCGCAGCTGATTCTGATCTTTTATATCCTTTGTCTAAAACATCAGGAAAGAGAGGTCAAATTCTTCACAGAGACAGAGGAGAATAACCAGATGCGAGGACCGAGGACTGCTGTCCCATATTTCCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004246

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004246&oldid=41970"