BGIOSGA004255

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Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004255| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004255, complete gene.| tag = P0431H0...")
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Gene Name

BGIOSGA004255

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004255, complete gene.

LocusTag

P0431H09.25

Ensembl Transcript ID

BGIOSGA004255-TA

Ensembl Protein ID

BGIOSGA004255-PA

Length

5404

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32043755..32049158

Sequence Coding Region

32043755..32043844,32044025..32044094,32044293..32044390,32045258..32045396,32045472..32045599
,32045729..32045821,32045936..32045986,32046634..32046699,32046797..32046862
,32046953..32047033,32047129..32047206,32047477..32047656,32047731..32047806
,32047889..32048016,32048796..32049158

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32043755..32049158 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32043755..32049158 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGCTGCAGAGCTGGCGCAAGGCGTACGGCGCGCTCAAGGACACCACCACCGTCAGCCTCGCCAATCTCAACTCCGACTTCAAGGATCTGGATGTGGCGATTGTGAAGGCCACGAACCACGTCGAGTGCCCGCCCAAGGAGCGCCACCTGCGAAAGATTGCAGCGGCGACGTCCATCGCTAGGCCTCGGGCGGATGTCGCCTACTGCATCCATGCTCTTGCTCGTCGCCTCGCCAAGACCCGGAATTGGATTGTTGCACTGAAGACACTTGTGGTGATCCACAGGCTTCTCCGGGATGGTGATCCTACATTCCGTGAAGAGTTTCTTACTTTCACACAAAGAGTGCGGATTTTGCAATTATCAAACTTCAAGGATGACTCCACCCCTGTTGCTTGGGACTATTCTTCATGGGTTCGTACATACGGTTTGTTTTTGGAGGAAAGACTGGAATGCTTCAGGGTCTTAAAGTACGATATTGAAGCTGAGCGTTTGTCGAAGCAGGGTCAAGGGCCTGAAAAGGGCCACAGTAGAACCAGAGAATTAGATTCTCCGGACTTGCTGGAGCAATTACCAGCACTGCAGCAGTTACTCTATCGACTTATTGGATGTCGGCCAGAAGGAGCTGCAAATAGCAATTATTTGGTGCAGTATGCTCTAGCTCTGGTTCTTAAAGAAAGCTTCAAAATCTATTGTGCAATAAACGATGGAATTATCAACCTTGTTGACAAGTTTTTTGAGATGCCAAGGCACGAAGCACTCAAAGCCCTTGAAATTTACAGGAGAGCTGGACAGCAGGCTGGAAGCCTATCGGACTTCTATGAAAACTGTCGGGGATTAGAACTTGCAAGAAATTTCCAGTTTCCTACTCTGAGGGAGCCACCACAATCATTCCTTTCGACCATGGAGGAGTATGTGAGAGAGGCTCCACGCATGGTTCCAATTAAGGAACCTTTGGAGTTTCCTGAGAGACTCCTCCTGACATACAAACCAGAAGAATCAGAAGAGATTCCTGAGCCTGTTTCTGCTGAGGAGGAAAAACCACAAATTGAAGAACCTGCTGTTGCAGTGCCATCTACTGAAGTAGTTCCACCACCACCTCCTAAACCTGAGGTCGTAGACACCGGTGATTTATTGGGATTAAGCGATCCAACCCCTAGTGTATCAGCAATAGAGGAAAGCAATGCTTTGGCCTTGGCTATTATTCCTACAGGTGGTGAGACGTCAACAAGTGGCACAGCTACACTGCAAGATAAAGGATTTGACCCTACAGGATGGGAACTTGCTCTTGTTACTACCCCGAGCACCAACACAAACTCAATGGCCATGGACAGTAATTTGGGTGGTGGATTTGACAAACTCATTCTGGACAGCCTATACGACGAGGGAACCTACAGGCAGCAGATGCAGCAGCAGCAGCTGTATGGTTCAGCTGCCCCCAACCCTTTCATGGCGAGTGATCCTTTCGCTATGTCGAATCAAGTAGCTCCCCCACCATCAGTTCAAATGGCTAGCATGACTCAGCAACCCCAGCAGATGCCTATGATGATGCAGCCAAATCCCTTCGGGCCACCACTACAGCCGCAGCATGCAGGCATTGCTCAGGCACCCAACCCCTTCCTCGATGCTGGGTTCGGCCCTTTCCCAGCATCAAATGGGATGCACCCGCAAGCCAACCCGTTTGGAACCGCCCAACTTTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MSALQSWRKAYGALKDTTTVSLANLNSDFKDLDVAIVKATNHVECPPKERHLRKIAAATSIARPRADVAYCIHALARRLAKTRNWIVALKTLVVIHRLLRDGDPTFREEFLTFTQRVRILQLSNFKDDSTPVAWDYSSWVRTYGLFLEERLECFRVLKYDIEAERLSKQGQGPEKGHSRTRELDSPDLLEQLPALQQLLYRLIGCRPEGAANSNYLVQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEALKALEIYRRAGQQAGSLSDFYENCRGLELARNFQFPTLREPPQSFLSTMEEYVREAPRMVPIKEPLEFPERLLLTYKPEESEEIPEPVSAEEEKPQIEEPAVAVPSTEVVPPPPPKPEVVDTGDLLGLSDPTPSVSAIEESNALALAIIPTGGETSTSGTATLQDKGFDPTGWELALVTTPSTNTNSMAMDSNLGGGFDKLILDSLYDEGTYRQQMQQQQLYGSAAPNPFMASDPFAMSNQVAPPPSVQMASMTQQPQQMPMMMQPNPFGPPLQPQHAGIAQAPNPFLDAGFGPFPASNGMHPQANPFGTAQLL</aaseq>

Gene Sequence

<dnaseqindica>1..90#271..340#539..636#1504..1642#1718..1845#1975..2067#2182..2232#2880..2945#3043..3108#3199..3279#3375..3452#3723..3902#3977..4052#4135..4262#5042..5404#ATGTCGGCGCTGCAGAGCTGGCGCAAGGCGTACGGCGCGCTCAAGGACACCACCACCGTCAGCCTCGCCAATCTCAACTCCGACTTCAAGGTCCGCGTCGAGCTTTTGCACCCTCCCCCAATCCAGTGGCGCAAACTGGTTCAGTTCATCCGATTTGCCGCAACCGACTGGGGGACGAGGAGTCCAGGAGGGGGAGGCGTTTGGATCTGTGTTGTACGCATCCATTGGGATTTATTTTAGTTTGCGATGTTTTTCTTTTCCCCTCTGTAGGATCTGGATGTGGCGATTGTGAAGGCCACGAACCACGTCGAGTGCCCGCCCAAGGAGCGCCACCTGCGAAGTACGTTGATTCGTCCTCACTACCAATCTGCCAATCTCCTATACCCTCGCTTGCGATTTTCTGCTTAATTTAGTTCAGTGTGTGTGGAATCAGATTTGAGAATTGAGATTGTTCGGTGGGATGGAGGGTACTTGCTGTTGGGGTTTTCCCCATTCTCTGTTGGGTTTGGTGTTTGATGGGTTGGTGGTTGTGTTGCAGAGATTGCAGCGGCGACGTCCATCGCTAGGCCTCGGGCGGATGTCGCCTACTGCATCCATGCTCTTGCTCGTCGCCTCGCCAAGACCCGGAATTGGATTGTAAGCACCGTGCACTCCTGTTGAGATTTTTCGTGTTTATGTTTTATGTTTGTATCTTTTATGCTTAGGTTGCGTTGAGCGCTTGCCATACTGTAGTCGAGTAACAGGCGGGTTGCAAAACTGAAATTTTTGCAGTATATAAATGTAGTCATTTATGTAACTGCCGCAGTGTAAGAAGTTAGGATACTGAGCTTGAGCTTTTTGTGGTTTAGCGGTGGTACAGTGGTGCTAATGTGGGCATCCAACCATCCAGGATAGTAGAATGTACATTTAAATTATGTTACCGCTTATGCCCTCGATATATCTCAAACTTGAAATATAACTTAACTCAATTGATTAACATTCTCTCCTCTATATCTGAGATGGTCTGCATTTTTCTGGTCTTTCTTGTTGATTTTGATAGCCTTTTGTTCACCATCCATGGTTTCTCTATTTTTCTGGTTGCCCTGAATCATGTTTTTCGATTCTGTGATGTTCTGTCTCATATTAAATGCTTGCTTTGATCTGGATCTTTTTTGGCTGATTTGGTGAAACTCAATGTGTTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTTCCACATTCATATTGATGTTAATGAATCCAAATAGATATATATGTCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTAAATCGGCTTGGTCCCAAACAAGTTTTTCTGATTTATGGTTTTCGTGCCACCACTTCAACAGCAGATCAGCAATACTTCAGACACTCTTCAGTGTTCTGTTCTATTTGCAAGTATTCGCTGGTCCACATCTGGAGCCAATTAATGTAACATTCATTTCATGCACTATGTAGGTTGCACTGAAGACACTTGTGGTGATCCACAGGCTTCTCCGGGATGGTGATCCTACATTCCGTGAAGAGTTTCTTACTTTCACACAAAGAGTGCGGATTTTGCAATTATCAAACTTCAAGGATGACTCCACCCCTGTTGGTTAGTAGAGCACATCAATTTTCTTTAGTATCACCTCCTAAATTCCCATTGTTTCTAATACAACTTTTTATCCAGCTTGGGACTATTCTTCATGGGTTCGTACATACGGTTTGTTTTTGGAGGAAAGACTGGAATGCTTCAGGGTCTTAAAGTACGATATTGAAGCTGAGCGTTTGTCGAAGCAGGGTCAAGGGCCTGAAAAGGTTTGGTTATTATCAATCTCATTTGGTTATTGTAGTCAAATTAGCTACCATGATTATAATTAGAGTTACAACATTTTGTCAATTATTGGTTTCTATCTTGCTGAATTCTTCATATTGTGACTTTTTCAGGGCCACAGTAGAACCAGAGAATTAGATTCTCCGGACTTGCTGGAGCAATTACCAGCACTGCAGCAGTTACTCTATCGACTTATTGGATGTCGGGTGATTTTCTCTTTTGCCAGTTTGGACTAATGGGGGAAATAAACATTCTAAAATCTAATTTTCCAGTCTGTTTTTTGTGAAGATAACCTGACAGCTTTCTTTCTTCTTATGCAGCCAGAAGGAGCTGCAAATAGCAATTATTTGGTGCAGTATGCTCTAGCTCTGGTAAGCTATGTTTTTTCTTTTACACCAGTGTTTTTCTTCTTGTGGATGCAGATGTGTTTCTTTTTATTACCCAATCGCTCCATTGCAAACATCTTGGTTGCCTTGGCACTTCATAATTTGTCAGGATGAAGAGCCATATCCTGCTATTACTGATATAATTGAGCAGTTCCTTCTCTGGACTAGAGTCTATTCTTAGAATAAGGGCATCTTTTGTGCAACATTGTATCTGTGCTATCTTTTCGCTCATGTCATTGCTTGCTTGTACAGATCTTTTGCAATATTTTGTAGAGCAAACTATGATCAGGTGGTGATGCCTTAGTAGAGTACATTCCTAGAAATTTTCCTTTGTTAAAATGGTTTTATATCTATATACTATCTTAGGACATTTGGACAGTTCTTTTTTCAGAATTTAAATCTTTTGGGGCATTCTATTTTGTGTTGATATCCTTAGTCATATAAGGAAATAAAAGTTTCTTTGGTGTTTTTTGTAATAACATTCTGGTCATAAGAAAACAAAAACGATCACTGTCCTTTTATGAATTAAATTTCCAGTTAGTGTTATGAATTAAATTTCTTGATAGTTTTAGTAATTTAATTTTATATTAGTTTAACTTGGTAAGTTGAGTGAATCTCCTTGCTTTGCACAGGTTCTTAAAGAAAGCTTCAAAATCTATTGTGCAATAAACGATGGAATTATCAACCTTGTTGACAAGGTAATTTGTTTTTATATTGACAGCACTATACTGTTTATTTTTGTTCTGGCAAGTTGTGCATACTAATATTTTCTTTTGTTGCTCGAAAATGATGCAGTTTTTTGAGATGCCAAGGCACGAAGCACTCAAAGCCCTTGAAATTTACAGGAGAGCTGGACAGCAGGTGATTCTAAGATTCTGAAGGATGGTTATCTGAAATTTGTGGTATTTCAAAGATGATGATAATGGTAGAAATAACACTGTTATGCTCTAGGCTGGAAGCCTATCGGACTTCTATGAAAACTGTCGGGGATTAGAACTTGCAAGAAATTTCCAGTTTCCTACTCTGAGGGAGGCAAGTATTTTTGTGCTAACTGTACAACTTCTTGTATTGTAAATCAGAATCAGATAAATCATTGTCATCACTTTCTTTTTCTATATTTGTTCCAGCCACCACAATCATTCCTTTCGACCATGGAGGAGTATGTGAGAGAGGCTCCACGCATGGTTCCAATTAAGGAACCTTTGGTCAGTTCTTAGTTAAAATGACCTGCTATTTCTTTTAAAAATGCCTTCTACGTTTCGATATGCCTCCTTTATATTATAATAATCAAGCAGCAGCCCTGATGATGATGTTTGTGCAATATTTATCTTCAATTGAAATTTGAAACCATAGCAAAAGAAGAATCACATCTGTTGTGTCACCACAGTAAAATAATCACATGTTGATTTGTACTAAAATAATCATTCGATCTATAAAACGGATTCTTAAACTCTTAATAATTGTTATTTCACCAGGAGTTTCCTGAGAGACTCCTCCTGACATACAAACCAGAAGAATCAGAAGAGATTCCTGAGCCTGTTTCTGCTGAGGAGGAAAAACCACAAATTGAAGAACCTGCTGTTGCAGTGCCATCTACTGAAGTAGTTCCACCACCACCTCCTAAACCTGAGGTCGTAGACACCGGTGATTTATTGGTAAGTAGAAGAAACCATTTACTGCATGCTGCACTGGTTCATTTATCACAATTTAATGATATGTATGCTCCTAGGGATTAAGCGATCCAACCCCTAGTGTATCAGCAATAGAGGAAAGCAATGCTTTGGCCTTGGCTATTATTCCTACAGGTATTTTGTCATCCTTCAATCCAGTGATGCCTATCATGAACCTTGTGTTAGATAATTCTGAAAATTGTGTGCAATATAACAGGTGGTGAGACGTCAACAAGTGGCACAGCTACACTGCAAGATAAAGGATTTGACCCTACAGGATGGGAACTTGCTCTTGTTACTACCCCGAGCACCAACACAAACTCAATGGCCATGGACAGTAATTTGGTGGGTTTTCTTACTCTTTCTCTGAGGATATTTATGGTTAGTATAATGTCCCGCTTTGGATTTGGAAACTGTTATTCTGCTGTTAGTGGCTCCTGCCAGCTTGTCTTGGTTTTGGATCGGACGGGGTTTTAGCCATAGCTCCCAAATCAATCTGGCTGGAAAAGCTTTGCTGGTTCATTGTTGGTGAAAACAGGGAGCACAACTACTCATATATATCTGTTTATCAGAAAGCATTTAAGTGAGAAAAAATGATAACTTTGTAATTGGTGTGAATTGCAAGTAAATGATTTATTTCCTAGAATTAATGGACCTCATGGAGTCTTGGGCTAATCTAGAAAGTGGTTGTAACAAACTTGGTTAAGGTTAAGTCCATGAAAGACCTGCTGACATGCTCTGCTTCTCAAAGAAAAAGTTCATTATGCTAGCAAATTCTGCAATATCTCATCCTAATAGTGATTAACTTTGGGCTTGGACTTTTCCTTTTGCGTTTTCAATTTATTTGGGCAAAAGTGTCCCCAAACTCAACTTTCAGGTGAAAATCACACTTTTCATAGACAGTCTTTGGATTTGCTTCTAAATTTTAATGACTGAGCTGATAGTTGGCATCTTTACAATTTGTTCTACTTTTATACTTATGATCTCATAATGGTAATATTTAAAATTTTGAACTGTTGAGTGATTCGGGTTGGGTTCAGTAACCATGTGATTTTTTACTCCATATTTGCCATTATTGGTCTAGCTGATCAGGCCAAAATTTATTCTCTTGTTTTTGTCTGCAGGGTGGTGGATTTGACAAACTCATTCTGGACAGCCTATACGACGAGGGAACCTACAGGCAGCAGATGCAGCAGCAGCAGCTGTATGGTTCAGCTGCCCCCAACCCTTTCATGGCGAGTGATCCTTTCGCTATGTCGAATCAAGTAGCTCCCCCACCATCAGTTCAAATGGCTAGCATGACTCAGCAACCCCAGCAGATGCCTATGATGATGCAGCCAAATCCCTTCGGGCCACCACTACAGCCGCAGCATGCAGGCATTGCTCAGGCACCCAACCCCTTCCTCGATGCTGGGTTCGGCCCTTTCCCAGCATCAAATGGGATGCACCCGCAAGCCAACCCGTTTGGAACCGCCCAACTTTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004255

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004255&oldid=41979"