BGIOSGA004259

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Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004259| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004259, complete gene.| tag = OS01G06...")
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Gene Name

BGIOSGA004259

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004259, complete gene.

LocusTag

OS01G0695700

Ensembl Transcript ID

BGIOSGA004259-TA

Ensembl Protein ID

BGIOSGA004259-PA

Length

5807

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32087048..32092854

Sequence Coding Region

32087048..32087206,32087810..32088031,32088141..32088379,32089010..32089535,32089626..32089899
,32090006..32090645,32090731..32090959,32091193..32091459,32091542..32091805
,32092210..32092854

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32087048..32092854 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32087048..32092854 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGAGAAAGGCAGTCGGCACGCATTCGATCCTTGTACCTCGAAGCGATTCTCACACAAGACATTGCATTCTTTGATGTGGAGATGACAACTGGAGAAGCTGCTTCTAGAATATCTGCAGATACCGTACTGATCCAAGATGCCCTTGGTGAGAAGGTAGGAAAATATATACAGGTTTTGACAGCCTTTGTAGGTGGTTTTGTCATCGGATTCATAAGAGGCTGGATGCTGGCTCTTGTTGTGATGGCTTGTATACCTCCAAGTATTTTCTCTTTTGCATTAGTCTCTCGATTACGGGCTCAAATATCTGGAAAGACGCATGTATCATATAGCTATGCGGGGAATGTTGTTGAGCAGACCATTGGATCTATACGAATGGTTGTCTCCTTCAATGGTGAGAAGAGAGCAATTACAATGTATAATACTCTCATAAAAAAGGCATACAAGGCCACTATCATGGAAGGGATTATCAGTGGTTTTGGAATAGGCTCTATCTTTTTTGTTGTTTACTGCAGTTACTCTCTTGCATTTTGGTATGGTGCCAAGTTAGTCATTAGCAAAGGCTACACTGGAGGGCAAGTCATCAATGTCGTATTTGCAATTTTGACTGGTTCAATGGCTATAGGTAACGCATCACCCTCTATTTCTGCTATTGCAGAAGGCCAATCTGCAGCTCATAGGTTATTCGAAATAATCAATAGAAAACCAAATATTGACATCACTGGAACTTCTGGAATAATATTAGAAGATATCAAGGGGAATGTTGAACTCAAGGATGTGTGCTTTAGCTACCCCGCAAGGCCTGAACAGTTGATACTAGATGGCTTATGTCTACAAGTACCTAATGGTACTACAATGGCAATAGTTGGGCAAAGTGGAAGTGGTAAATCAACAATAATTAGTTTGGTAGAGAGATTCTATGACCCACAGGATGGTGAAGTGTTAATAGACGGAATTAACATCAAGACCTTGAAACTCCACTGGATAAGAGGAAAAATGAGTCTTGTTAGCCAAGAGCCATTGCTTTTTATGACCTCCATCAAAGATAACATAACCTATGGTAAAGAAAATGCTACAGATGAAGAAATCAAGAGAGCAGCTGAGCTTGCAAATGCAGCAAACTTCATTGATAAGTTGCCTAATGCATATGACACAATGGTGGGTCAACATGGTGCTCAGCTTTCTGGGGGACAAAAGCAAAGGATTGCCATTGCAAGAGCTATCCTTAAAAATCCAAAAGTCCTCCTGTTGGACGAAGCTACTAGTGCATTGGATGTAGAGTCTGAGAGGCTAGTTCAAGAGGCACTAAATAGGGTCATGATAGGGAGAACTACACTCATTGTGGCCCACCGTTTGAGTACAATCAAGAATGCCGACTGCATAGCAGTGGTTCACCAAGGAAAAATAGTTGATCAAGGTTCCCACGATGAGTTGATCAAGGATCCCGATGGAGCTTACTCTCAACTTATTCAGTTACAACAGACTCATACTGAAGAAATGCATGATGTACAATATAGTGAGGTGTCAACTTCAAGACTTAAAAGTAGAAGTTTGTCTTTGGAACAATCAATGATCAATGATTCTCCTAGAAATAGAAGAAAAAACTCTTTAGCAAAACATATTGGCTCATCTGGATCCGATGGATTGCACAAGCATGGTCTTACAGATGAACCTGAAGATAAAGAATGTGGTGACAACAAGGATATTAATAAAGCACCAATCAGGCGACTTTTTAATCTCAACAAGCCAGAAGCACCTATTCTACTATTAGCTATTATAACTGCTTTTGTGCATGGACTTCTTTTCCCGATATTTAGTATAATGATGTCTGGTGGTATAAGAACTTTTTACTATCCACCACACCAACTTCGAAAAGATTCTAGGTTCTGGGCTTTGATGTGCATTCTAATGGCAATCATTTCTCTGGTATCGATTCAATTAGAATATTTCTTATTTGGAATGGCTGGTGGAAAACTTATAGAACGTGTCCGCTGTTTGTCTTTCCAAAGCATCGTCCATCAAGAAGTTTCTTGGTTTGATGATCCTTCCCATTCTAGCGGATCACTTGGAGCAAAGTTGTACATTGATGCTTTGAACATCCGACGCCTTGTGGGAGATAACTTAGCCATACTAGTGCAGTGCATTGTAACGCTTATTGCAGGATTTACTATAGCATTTGCTTCTGACTGGAAGCTCACATTGACCATCATGTGTCCGATCCCTTTGGTGGGTTTGCAAAATTATGTACAATTGAAGTTCTTGAAAGGGTTCAGTGAAGATGCTAAGGTGATGTATGAAGATGCAAGTCAAGTTGTAACTGAAGCAATTGGTAGCATTAGGACTGTAGCGTCTTTCTGTGCAGAGAAGAGAGTGATTAAAACATACAACCAAAAATGTCAAGCTTCAATGAAAGAAAGTATTAGAAGTGGAATGGTTGGAGGCCTAGGTTTCAGCTTTTCATATTTAATGGTGTATCTCACATATGCTCTTTGTTTCTATGTTGGTGCACAGTTTGTACATGGGGGGAAATCAACCTTTAAAGATGTCTTCAGAGTTTACTTTGCTTTAGTTTTCACAGCTTTTGGAATTTCTCAAACAAGCGCAATGGCATCGGATTCATCAAAAGCCCATGAATCCGCAGCTTCAATATTAGCAATCATAGACAGAAAGTCCAATATTGACTCAAGCATTGATGAAGGAATCATACTAGAAAAGGTTAATGGCACAATAGAATTGAATCATGTGAACTTCAAGTACCCATCTCGCCCAGATGTCCAAGTTTTATGTGATTTTACCTTAGGCATCCCCTCCGGAAAGACTGTTGCACTTGTTGGAGAGAGCGGCAGTGGAAAGTCCACAGTAATTGCTTTGCTGGAGCGATTCTATGACCCACATTCTGGCACAATCTCACTAGACAGAGTAGAACTTAAAAACTTAAAATTGAGTTGGTTAAGAGATCAAATGGGATTGGTAAGCCAAGAACCAATACTTTTCAATGACACAATTCATGCCAACATAGCATACGGGAGGAAAGGACAAGTAACCGAAGAAGAGATTATAGCTGTTGCTAAGGCAAGCAATGCTCATGAGTTCATATCAAGCTTGCCTCAGGGATATAACACTACTGTCGGAGAAAGAGGAACACAACTATCTGGTGGGCAAAAGCAACGGATAGCTATAGCAAGGGCCATCTTGAAGGACCCAAAAATACTTCTGTTGGATGAGGCTACAAGTGCCCTTGATGCTGAATCAGAGCGCATTGTTCAAGATGCACTAGATCAAGTTATGGTAAGCAGGACCACCATTGTGGTAGCACACCGTCTGTCCACGATTAAAGGGGCAGATGTGATTGCAGTCATCAAGGATGGTTCAATCGCTGAAAAGGGACAACATGACTCTCTCATGAGGATCAATGGTGGAGTCTATGCATCGTTGGTAGACCTACACTCAAAGACAACATAA</cdnaseq>

Protein Sequence

<aaseq>MAGERQSARIRSLYLEAILTQDIAFFDVEMTTGEAASRISADTVLIQDALGEKVGKYIQVLTAFVGGFVIGFIRGWMLALVVMACIPPSIFSFALVSRLRAQISGKTHVSYSYAGNVVEQTIGSIRMVVSFNGEKRAITMYNTLIKKAYKATIMEGIISGFGIGSIFFVVYCSYSLAFWYGAKLVISKGYTGGQVINVVFAILTGSMAIGNASPSISAIAEGQSAAHRLFEIINRKPNIDITGTSGIILEDIKGNVELKDVCFSYPARPEQLILDGLCLQVPNGTTMAIVGQSGSGKSTIISLVERFYDPQDGEVLIDGINIKTLKLHWIRGKMSLVSQEPLLFMTSIKDNITYGKENATDEEIKRAAELANAANFIDKLPNAYDTMVGQHGAQLSGGQKQRIAIARAILKNPKVLLLDEATSALDVESERLVQEALNRVMIGRTTLIVAHRLSTIKNADCIAVVHQGKIVDQGSHDELIKDPDGAYSQLIQLQQTHTEEMHDVQYSEVSTSRLKSRSLSLEQSMINDSPRNRRKNSLAKHIGSSGSDGLHKHGLTDEPEDKECGDNKDINKAPIRRLFNLNKPEAPILLLAIITAFVHGLLFPIFSIMMSGGIRTFYYPPHQLRKDSRFWALMCILMAIISLVSIQLEYFLFGMAGGKLIERVRCLSFQSIVHQEVSWFDDPSHSSGSLGAKLYIDALNIRRLVGDNLAILVQCIVTLIAGFTIAFASDWKLTLTIMCPIPLVGLQNYVQLKFLKGFSEDAKVMYEDASQVVTEAIGSIRTVASFCAEKRVIKTYNQKCQASMKESIRSGMVGGLGFSFSYLMVYLTYALCFYVGAQFVHGGKSTFKDVFRVYFALVFTAFGISQTSAMASDSSKAHESAASILAIIDRKSNIDSSIDEGIILEKVNGTIELNHVNFKYPSRPDVQVLCDFTLGIPSGKTVALVGESGSGKSTVIALLERFYDPHSGTISLDRVELKNLKLSWLRDQMGLVSQEPILFNDTIHANIAYGRKGQVTEEEIIAVAKASNAHEFISSLPQGYNTTVGERGTQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERIVQDALDQVMVSRTTIVVAHRLSTIKGADVIAVIKDGSIAEKGQHDSLMRINGGVYASLVDLHSKTT</aaseq>

Gene Sequence

<dnaseqindica>1..159#763..984#1094..1332#1963..2488#2579..2852#2959..3598#3684..3912#4146..4412#4495..4758#5163..5807#ATGGCTGGAGAAAGGCAGTCGGCACGCATTCGATCCTTGTACCTCGAAGCGATTCTCACACAAGACATTGCATTCTTTGATGTGGAGATGACAACTGGAGAAGCTGCTTCTAGAATATCTGCAGATACCGTACTGATCCAAGATGCCCTTGGTGAGAAGGTAACAAGACTAAAAAGTACACTAGACTAGTCTAAATGAAACTAGAAGAAAACTTCCATTAGAGCACCATTTGAAAAGATGCACATGCATTGAGAATTTTTTTCTTTGGAAATAGCATTAACTAGAAAGATGTGTTTTTAGTGTTACTGGGTTATATACTTATATAGTTCATCCCCACAAAATATAGTTAATGTTATTTCTCTCTTCTCTTATGAAGCCACATCATCATAATTATTTGTAGTCTTTAGATAATAGATCTATGGTACAAATTGTCTCTTCTTTCTTCTCTCACAATAATTAGTATCAATTATACATAAAATATGCTCACCGTGCACTATATTTGCAACCACGTGCAAATTATATAAAACATTAGAAGTCATTTTGTTTTGGTTTAAAAAAGCATACTGCAACTTATTTGTACATATTAGGCAACTTAATTTCTCACAGCAACATGTCAGGGTAATTATCTAGTTTATTAATAGTACGACACTCTGTTTTTCTAAAGAGGGGGGGGGGGGTCCAATTTCAGTACATAGATTTCCATGCTCATGACATAATGCAAAGATCTGATGTAACACTAATAATTTGACTACTCATGTTCAGGTAGGAAAATATATACAGGTTTTGACAGCCTTTGTAGGTGGTTTTGTCATCGGATTCATAAGAGGCTGGATGCTGGCTCTTGTTGTGATGGCTTGTATACCTCCAAGTATTTTCTCTTTTGCATTAGTCTCTCGATTACGGGCTCAAATATCTGGAAAGACGCATGTATCATATAGCTATGCGGGGAATGTTGTTGAGCAGACCATTGGATCTATACGAATGGTATGTTCTAATTATTTCAATTTATGACAAATAATAATGCTTAGTTTTGTACATCAATAATAATGCTTACTTGCAACTATTTAACATAAAAAAACATTTAAAAAAACAGGTTGTCTCCTTCAATGGTGAGAAGAGAGCAATTACAATGTATAATACTCTCATAAAAAAGGCATACAAGGCCACTATCATGGAAGGGATTATCAGTGGTTTTGGAATAGGCTCTATCTTTTTTGTTGTTTACTGCAGTTACTCTCTTGCATTTTGGTATGGTGCCAAGTTAGTCATTAGCAAAGGCTACACTGGAGGGCAAGTCATCAATGTCGTATTTGCAATTTTGACTGGTTCAATGTGAGTTTCCTAATTGTTGACTCTGTAACATGATATGCTAGAGCACACTAGTACATATACTAAACATTTTGATATAGTTTCTCAGCTACCATGTTATTATCAAGTAAAAAGACTGAGGCATACTAGGCACTTGATGCCTACTTCTACAATAGTTAGAATTAACCACATTACAATATAATACTCCTTTGCCATATGCCAAAATCAAGACGAATAATGCTAAAAAAATAAATTAAATTAAATTAAATAACATGACACAACTATTTTGTTACAAGTATAGATTTTGTAAAGCTTTATAATTTTTCATCATATATGTAGGAATAGGGTTTGCAACTCCATGCCTAGGTATCCAGTTCTCTTTAAAAAGATTTCTTGTTATTGATACAATTGTTATTTCACCCAATTATCTAATTATTATGGTATTAACCTATGATTATACTAAATACCATATTTCTCAACAGTGTTACTTTTGAAGCATAAGATAATATGAAACTTGTTCAACTCAACAAGAAGACCCAAACTTCATGTGTCAAATAACTATGTAGTGATGATCTGCACTATTTGGTCAACTACAAAAATAGGTTTTTTTTCTTCTTTTTTTTTGACACTAAATGCATCTTTTGTTTGTAACAGGGCTATAGGTAACGCATCACCCTCTATTTCTGCTATTGCAGAAGGCCAATCTGCAGCTCATAGGTTATTCGAAATAATCAATAGAAAACCAAATATTGACATCACTGGAACTTCTGGAATAATATTAGAAGATATCAAGGGGAATGTTGAACTCAAGGATGTGTGCTTTAGCTACCCCGCAAGGCCTGAACAGTTGATACTAGATGGCTTATGTCTACAAGTACCTAATGGTACTACAATGGCAATAGTTGGGCAAAGTGGAAGTGGTAAATCAACAATAATTAGTTTGGTAGAGAGATTCTATGACCCACAGGATGGTGAAGTGTTAATAGACGGAATTAACATCAAGACCTTGAAACTCCACTGGATAAGAGGAAAAATGAGTCTTGTTAGCCAAGAGCCATTGCTTTTTATGACCTCCATCAAAGATAACATAACCTATGGTAAAGAAAATGCTACAGATGAAGAAATCAAGAGAGCAGCTGAGCTTGCAAATGCAGCAAACTTCATTGATAAGTTGCCTAATGTAGTTCCTAGATACGCCATTTGTTTCCAACAGTACCATATATACTAGTGTATTAGAATTAACTATCCCTTTTATCTTCACATGATATAGGCATATGACACAATGGTGGGTCAACATGGTGCTCAGCTTTCTGGGGGACAAAAGCAAAGGATTGCCATTGCAAGAGCTATCCTTAAAAATCCAAAAGTCCTCCTGTTGGACGAAGCTACTAGTGCATTGGATGTAGAGTCTGAGAGGCTAGTTCAAGAGGCACTAAATAGGGTCATGATAGGGAGAACTACACTCATTGTGGCCCACCGTTTGAGTACAATCAAGAATGCCGACTGCATAGCAGTGGTTCACCAAGGAAAAATAGTTGATCAAGGTAAGCCATACTTCCATACCCATTACTTGGTATTTTCTCCGTACTAAATAATCATTGTGAATCAGAGGTAGTTCAATTTGTTTCTCCAAAAATGAATGTCCCACAGGTTCCCACGATGAGTTGATCAAGGATCCCGATGGAGCTTACTCTCAACTTATTCAGTTACAACAGACTCATACTGAAGAAATGCATGATGTACAATATAGTGAGGTGTCAACTTCAAGACTTAAAAGTAGAAGTTTGTCTTTGGAACAATCAATGATCAATGATTCTCCTAGAAATAGAAGAAAAAACTCTTTAGCAAAACATATTGGCTCATCTGGATCCGATGGATTGCACAAGCATGGTCTTACAGATGAACCTGAAGATAAAGAATGTGGTGACAACAAGGATATTAATAAAGCACCAATCAGGCGACTTTTTAATCTCAACAAGCCAGAAGCACCTATTCTACTATTAGCTATTATAACTGCTTTTGTGCATGGACTTCTTTTCCCGATATTTAGTATAATGATGTCTGGTGGTATAAGAACTTTTTACTATCCACCACACCAACTTCGAAAAGATTCTAGGTTCTGGGCTTTGATGTGCATTCTAATGGCAATCATTTCTCTGGTATCGATTCAATTAGAATATTTCTTATTTGGAATGGCTGGTGGAAAACTTATAGAACGTGTCCGCTGTTTGTCTTTCCAAAGCATCGTCCATCAAGAAGTTTCTTGGTTTGATGATCCTTCCCATTCTAGGTTTGTTACTCAAATGGATTTATAAGTTTCATTCTTATATCTAACACTTTTTTTGAATGTCAATTCACCCTTCTAAATTTTACAGCGGATCACTTGGAGCAAAGTTGTACATTGATGCTTTGAACATCCGACGCCTTGTGGGAGATAACTTAGCCATACTAGTGCAGTGCATTGTAACGCTTATTGCAGGATTTACTATAGCATTTGCTTCTGACTGGAAGCTCACATTGACCATCATGTGTCCGATCCCTTTGGTGGGTTTGCAAAATTATGTACAATTGAAGTTCTTGAAAGGGTTCAGTGAAGATGCTAAGGTGAAAACAAAGTCCCTAGTATGAACAAAGCAATTTCTACCATTTCTGTTTTTTATATAAAAAATTCACAGACAATCCTGACACTTTCCACATTTGATGAAGATGTGTGTTTTGTTAGATGACACCTAATTTGGTATTACAACTGACATATTTCATGATTGGCATCGCATAATGAATTTTTTTCTTGCAATATTAGTAAATATTGTTTTGCTAACTGCTAGCGATTTCTACAGGTGATGTATGAAGATGCAAGTCAAGTTGTAACTGAAGCAATTGGTAGCATTAGGACTGTAGCGTCTTTCTGTGCAGAGAAGAGAGTGATTAAAACATACAACCAAAAATGTCAAGCTTCAATGAAAGAAAGTATTAGAAGTGGAATGGTTGGAGGCCTAGGTTTCAGCTTTTCATATTTAATGGTGTATCTCACATATGCTCTTTGTTTCTATGTTGGTGCACAGTTTGTACATGGGGGGAAATCAACCTTTAAAGATGTCTTCAGAGTAAGAGATACACATTTGGCATCACTTATATAAGGTTGTTTTTATTCAATGACAATATGTCAATCTTGTAATCGCTTTGCAGGTTTACTTTGCTTTAGTTTTCACAGCTTTTGGAATTTCTCAAACAAGCGCAATGGCATCGGATTCATCAAAAGCCCATGAATCCGCAGCTTCAATATTAGCAATCATAGACAGAAAGTCCAATATTGACTCAAGCATTGATGAAGGAATCATACTAGAAAAGGTTAATGGCACAATAGAATTGAATCATGTGAACTTCAAGTACCCATCTCGCCCAGATGTCCAAGTTTTATGTGATTTTACCTTAGGCATCCCCTCCGGAAAGGTACAGTTAACTTGGTACTTTTAATTGTTTTTCCTTTACTTCTAAGGGTAAAACATTTAGATGTTGTGCACCCAAAAAAAAAGCAGCAAACTAGGAGCGCATTATTTTTGGAGGAAATATCTTGCTTCCTACAACTATTGTGCTTGTACGCTCTTAATATAGGGTGTGCACTCAATTGTTACAAATATGAGTTCCTATGCACTAAGGTTTGCCTTTTTAAACTTGATAGTTCCTACAGTATGTTGGATTGCCCTGATCCTTGTCTTCTCATCCTCATTGAGCAAGGCAAGAGAACTAAATATGCCTTTCAAATGAAAATTACCAATAATACAAATTTCTCTATATTTATTTTCCTTTATAATTAAACTTGTACTGACATGCTATAAACCAATTGTCATATGCAGACTGTTGCACTTGTTGGAGAGAGCGGCAGTGGAAAGTCCACAGTAATTGCTTTGCTGGAGCGATTCTATGACCCACATTCTGGCACAATCTCACTAGACAGAGTAGAACTTAAAAACTTAAAATTGAGTTGGTTAAGAGATCAAATGGGATTGGTAAGCCAAGAACCAATACTTTTCAATGACACAATTCATGCCAACATAGCATACGGGAGGAAAGGACAAGTAACCGAAGAAGAGATTATAGCTGTTGCTAAGGCAAGCAATGCTCATGAGTTCATATCAAGCTTGCCTCAGGGATATAACACTACTGTCGGAGAAAGAGGAACACAACTATCTGGTGGGCAAAAGCAACGGATAGCTATAGCAAGGGCCATCTTGAAGGACCCAAAAATACTTCTGTTGGATGAGGCTACAAGTGCCCTTGATGCTGAATCAGAGCGCATTGTTCAAGATGCACTAGATCAAGTTATGGTAAGCAGGACCACCATTGTGGTAGCACACCGTCTGTCCACGATTAAAGGGGCAGATGTGATTGCAGTCATCAAGGATGGTTCAATCGCTGAAAAGGGACAACATGACTCTCTCATGAGGATCAATGGTGGAGTCTATGCATCGTTGGTAGACCTACACTCAAAGACAACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004259