BGIOSGA004264

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Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004264| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004264, complete gene.| tag = OJ1116_...")
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Gene Name

BGIOSGA004264

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004264, complete gene.

LocusTag

OJ1116_H09.32-1

Ensembl Transcript ID

BGIOSGA004264-TA

Ensembl Protein ID

BGIOSGA004264-PA

Length

5159

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32183287..32188445

Sequence Coding Region

32183287..32183596,32184665..32184807,32185229..32186008,32187045..32188445

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32183287..32188445 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32183287..32188445 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCTGGAGATCGTGGGCCGGCACGCGCTGCTGTTCGACGACGACCCGACGGCGGAGGTCGTCAACTCCGGCGGCTCCCTCGTCCCCTGGGCCGCCGTCGGCGCGGACGACCTCCTCCTCGACCGCCACGACGTCCGGCACCTGCTCGACCGCGTGCCTCCTCGCCCCCGCCGCTCCTACTCCGCGGCCCTCCTCTCTGCCCCCTCTCTGGATGGCGTCTCCGAGGCTGAACTCGACCGCGAGCGCTTCCTCGACCTCACCGCCGACGATTTCGGCGGCGAGGGCTCTCAAGATGCGGTCTCTTCAGGAAATGGGACAGATACAGGTCGGGCTGATTATAATTCTGTCCCTTTCTCATATGGGAGTACTGCTGGTTCAGATGATCCAAATAATTTGAGCACATATTATTGCCCATCTTTTCCCGTGCCTGACAGATTGTTGAATAAGCTGCCTCCTTCTGAGAAGGTTCATCAAATTATTGCAAGAACTGCTCTATTTGTCAGTGAGCATGGGGGCCAGTCAGAGATTGTGTTAAGGGTGAAACAGGGTAGTAATCCAACATTTGGTTTCTTGATGCCTGACCATCATCTCCACAGCTACTTCCGGTACCTTGTAGATCATCCTCAGTTGTTGAAAGATGGTCTAGATGCTGATTCAAACAAGGGCTGCAAAACTGCCAATAGTGAGAGTGGGCATGATGCATCATCAGGCGGGGCTTTGTCATTGCTTGGGGCTGTCTATGAGTCTGGAGATGAGGATGAAGGCATGCTTCCGCCTAGTCCAAAAAGCACGGTTCCTGGAAAAGACGTGGTTGTGCATGAGCAAGGTCATGAAAGCTCTGTATCTGCTATACATTGCAACGAAGAAGCACGGGATGGTCAGAAAGCAACGGCAGCAGCTACTGTTGCAGCTAAAGATAAATCTATTTTGACTAAGAAGAACCCAATGATTACTGGCAGCAGCCTTCTTGCTGCTCGCCTAGAGAAGGCCAAAGATGCCATGATGGCATCAAGTACGTCAGATGTTTCTGACACAAAAGTTGTGATTCTGGAACCACCATCTTTCTTGAAGCGTACAATGGAGAAAATAGTTGAATTTATTATCAGGAATGGGAAAGAGTTTGAAGGAAAACTCATTGAGCAAGACAGAACAACAGGAAGGTTTCCATTTCTTCTGCCATCTAATCCATATCACCCATATTATCTGAAGCTTCTCGAGGAAACTCAAGAGTCCAAGTCCCGTGGTGGTTCTTCAGAGCCCAAAGACAGAAAAAGCTCTTCAGAGCACAAAGACCGAAGAAGCTCTTCAGAGCAGAAAGACAGAAGAAGCCCTTCAGAGCGCAAAGGTAGTAATCATGGTAAGGGAGAAAGTAAAAGCAAGAAACGGTCAAGTACTAGCAAGGATGCCAGTTCTCCTGATAGAAGCTCTGCTGAGCCGTCAGAGAAGCAGCTCTATGACAAACACAAACAAGGGAAGGGAAAGTTCCACATGATCATTAGTGGGGCCAAGAAGGAACCTCCTCGGAATGTCACTGCGGATGAAGCTGCTGCTATTGTTATGGCAGCTACTCGTGGATTTGGCCCTGCCAATATTCAAACAAACACACTGAAGGACACTAGTGGAATTGGTCAGACCCGTGGAGATAATGGACATACTTCAAGCTTTGGAAGTTTCTCCTCTTTACAGGACCCAGATGTACCATCCAAACCTGTTTCAAATAGTGAGGCATGTACCTCACTCACAAGTAGTGGTCAGCCTAAAAATGAAGGCACTGGAATAATTGATGATGATTGGATTGCAAACACTATCGCAAAAGCTGCTGCTGTTGCAGCCTCTAAAGAAGCTGATTCTTCTGAAGCATCCATGACAAAAGAGCAGAAGCTGAAGGCTGAGAGGCTTAGACGTGCAAAGATGTTTACCTCTATTATTAAGAGTGGTGGCAGCAAGATGGCTGATTTGTCAACTTCAGCTGATCAAACTAATGAAGCTGGAAGGGCCTCTCCTGGTGATTTGAACTTATCTGAGTCTGATCCACAACCATCAGCTAAGGAACGTGAAGGTAGCTCTGTGCCATTTGAACGTGAAGGCTCTAATCTGGCCAAGCAGGAGAAAGACTCTGATGACGAACGGAACAGGGCAAGGAAGTATAGGAAAAAACATCACCCAGAATCTGACGAGGAGAACTATGATTCAGAGGAGAGCTATAAACACTCTAGGAAGAAGCACCGTTCAGAGGATTCAAGAGCTCATACTAGTGATGTTCACAAACATAAGCTCAAGAGACACTCCAAGGATCTGGAACCCAGGCATCATAGGCACCGTGATAGCTCTTCAGAAGATGAGCATGAGCACAGGAGCTCCAAGTCAAGGCATCGTCACAGGGATGACTATCACTATCACGAGGATGATGAGCATAGGAGTTCACATAGACACCAGAGGGACCACCGTTCCAGTTCAAAAAGGAAAAAGGACGATGACCGAGATAAGAGCAAACAAACTATAGTTCTCCCAGAAGTCTCCCAGAACCAGGAAAAGCCCCCTGGTGACACTGCTCAATCCTCCCAGGCAACAACTGAAGTGCCGAGTGAGTTGAGAGCAAAAATCAGAGCAATGTTGCTAGAAACACTGTAA</cdnaseq>

Protein Sequence

<aaseq>MDLEIVGRHALLFDDDPTAEVVNSGGSLVPWAAVGADDLLLDRHDVRHLLDRVPPRPRRSYSAALLSAPSLDGVSEAELDRERFLDLTADDFGGEGSQDAVSSGNGTDTGRADYNSVPFSYGSTAGSDDPNNLSTYYCPSFPVPDRLLNKLPPSEKVHQIIARTALFVSEHGGQSEIVLRVKQGSNPTFGFLMPDHHLHSYFRYLVDHPQLLKDGLDADSNKGCKTANSESGHDASSGGALSLLGAVYESGDEDEGMLPPSPKSTVPGKDVVVHEQGHESSVSAIHCNEEARDGQKATAAATVAAKDKSILTKKNPMITGSSLLAARLEKAKDAMMASSTSDVSDTKVVILEPPSFLKRTMEKIVEFIIRNGKEFEGKLIEQDRTTGRFPFLLPSNPYHPYYLKLLEETQESKSRGGSSEPKDRKSSSEHKDRRSSSEQKDRRSPSERKGSNHGKGESKSKKRSSTSKDASSPDRSSAEPSEKQLYDKHKQGKGKFHMIISGAKKEPPRNVTADEAAAIVMAATRGFGPANIQTNTLKDTSGIGQTRGDNGHTSSFGSFSSLQDPDVPSKPVSNSEACTSLTSSGQPKNEGTGIIDDDWIANTIAKAAAVAASKEADSSEASMTKEQKLKAERLRRAKMFTSIIKSGGSKMADLSTSADQTNEAGRASPGDLNLSESDPQPSAKEREGSSVPFEREGSNLAKQEKDSDDERNRARKYRKKHHPESDEENYDSEESYKHSRKKHRSEDSRAHTSDVHKHKLKRHSKDLEPRHHRHRDSSSEDEHEHRSSKSRHRHRDDYHYHEDDEHRSSHRHQRDHRSSSKRKKDDDRDKSKQTIVLPEVSQNQEKPPGDTAQSSQATTEVPSELRAKIRAMLLETL</aaseq>

Gene Sequence

<dnaseqindica>1..310#1379..1521#1943..2722#3759..5159#ATGGATCTGGAGATCGTGGGCCGGCACGCGCTGCTGTTCGACGACGACCCGACGGCGGAGGTCGTCAACTCCGGCGGCTCCCTCGTCCCCTGGGCCGCCGTCGGCGCGGACGACCTCCTCCTCGACCGCCACGACGTCCGGCACCTGCTCGACCGCGTGCCTCCTCGCCCCCGCCGCTCCTACTCCGCGGCCCTCCTCTCTGCCCCCTCTCTGGATGGCGTCTCCGAGGCTGAACTCGACCGCGAGCGCTTCCTCGACCTCACCGCCGACGATTTCGGCGGCGAGGGCTCTCAAGATGCGGTCTCTTCAGGTATACGTCTGTTCCCGCTCCTCTTGACCTGCCTATGCACTCTTTCCCTATCCTCTATCCTGTATTGCAACTATTCTGCGTATCCATCAGCTGCCCTTTCACCTTTAGTTGCAATTGGGCGATGCGAGCTCTAAGAATCCAGTGTTTATCATCTTAAGAGTGCTAGCAAGAAATTAGACTCTCAACAACACCGCCTGATGTATCATGTAGTAGAGGTTAGAAACCAAACAGTTTTTTCTAGTCCCCTTTGCTCTCACTGGGATCCACAGAGAATAAAAATCTGCTGTAGGGATCAAACAAGAGTGAAGGACTGAAGGTACCAGACAATATGTTGTTGATCTGTGTGCAAGAGTTGCCTCTGCAATTGTAAGGACATACAGCAAAGATAATTTGTTATGTCATAATGTTGTTTGGTTTCAGTTGTGTGAATTTTCACCATCACGGATTTGTTTCAAGTCTTACTGAGGCTTCATTTGGATGGGTTCAAATGACATCATTCTGAACCCACCAAATGAAACCTTGCTGAGGTTAAGTCCATGAAATGGGAGGGAACTTACATCGTTCTGACTTTTGAGCCCATCCAGATGAAGCTAAGTACATGGACTGTAGATATTCGATCTTCTTGGTTAGAATATTATTTTAGTTCAATCTTCTGAAACATCGCCCTTGAATGGATCTCAGTTGTTTAAAAGTTCTTTTGTTTGAATGTTAGTAGCAAAATTAAGCTTCTCTCTGTTGAATTCCTGCAGTAGCTATTCTTCTAGCAACCAAACTAGGAAATAGTTACATTGTTATGGAGCTCGATATAGTGAGAGTGAGCAATACTTGCACAAGTAGCACAACTAGCAATGCTAATTGGACCCAAACATTTTTTTGTTGTACCTTTTGTAAGTTTGCAGGAAGGATGCTTGAATTTAGTTGATGAGCATCTTTAATCAGTTCAAGTAAGGGACTTCTATTTCTTCTAAGATGCATATTTGCATCTACACGTCTTCCTCTACATTCAACACTATATTTTATGTTGCTTGTGGTAAACAATGTTACATCTGACATCTTTTCTTTATACAGGAAATGGGACAGATACAGGTCGGGCTGATTATAATTCTGTCCCTTTCTCATATGGGAGTACTGCTGGTTCAGATGATCCAAATAATTTGAGCACATATTATTGCCCATCTTTTCCCGTGCCTGACAGATTGTTGAATAAGCTGGTAAGTACATGGACTATGGAGTCTGTCTGACTGCTTACATCGAACTTCTTTTAATAAATTGGAATTTTATTTCTTTATGCATTTTTGTATTAATATTCTTCAGCTGATCCAGCCATAATTATCCAAGGTGCATATGTTCTTCTAAGGATTAAATGCCTATTTCAGATGGTTGGAGCAGAGATGAGGTTCCTACTAGTGATGCACATTGTTTCCTTACATATATCATGATGTAAGGAATAGGCAGGTGGGATTAGAATGATGTAAATGTTACACACAACAGAAAAAAGTACTGGCATGGGATAGCTGTTCTTATGATATACCAGCTAAATTCATTTGAGCTTTGATCATAATCTTGTACTTCCATGCACTCAGACCCTTACTGAGACAATGTTTTCGCCCCCATATTTTTTTTCATTTGCAGCCTCCTTCTGAGAAGGTTCATCAAATTATTGCAAGAACTGCTCTATTTGTCAGTGAGCATGGGGGCCAGTCAGAGATTGTGTTAAGGGTGAAACAGGGTAGTAATCCAACATTTGGTTTCTTGATGCCTGACCATCATCTCCACAGCTACTTCCGGTACCTTGTAGATCATCCTCAGTTGTTGAAAGATGGTCTAGATGCTGATTCAAACAAGGGCTGCAAAACTGCCAATAGTGAGAGTGGGCATGATGCATCATCAGGCGGGGCTTTGTCATTGCTTGGGGCTGTCTATGAGTCTGGAGATGAGGATGAAGGCATGCTTCCGCCTAGTCCAAAAAGCACGGTTCCTGGAAAAGACGTGGTTGTGCATGAGCAAGGTCATGAAAGCTCTGTATCTGCTATACATTGCAACGAAGAAGCACGGGATGGTCAGAAAGCAACGGCAGCAGCTACTGTTGCAGCTAAAGATAAATCTATTTTGACTAAGAAGAACCCAATGATTACTGGCAGCAGCCTTCTTGCTGCTCGCCTAGAGAAGGCCAAAGATGCCATGATGGCATCAAGTACGTCAGATGTTTCTGACACAAAAGTTGTGATTCTGGAACCACCATCTTTCTTGAAGCGTACAATGGAGAAAATAGTTGAATTTATTATCAGGAATGGGAAAGAGTTTGAAGGAAAACTCATTGAGCAAGACAGAACAACAGGAAGGTTTCCATTTCTTCTGCCATCTAATCCATATCACCCATATTATCTGAAGCTTCTCGAGGAAACTCAAGAGGTAATGTGAACCACGCTTGTTTATACTTTCAGATTGCAATATTTCCTTTATTATCCCCCTTTCTGTTTGCTGTTTGGTACACTAAGTTTTATTAATCCCTTATGATATATGCATTGTTTCAATGTATATATTCATTATCTTTACAAGTTTACCCAGTGTTTTATGACTGAACTTCTCTCAAAATTTCACGCGCTCAATCCTTTCAATTGATTGTTCATCAATAATGTTTTGGTGAAACCGCACTAGGCATCAACTGCTAGATATGTTCATATAAAACCTCTTGTGATGATGGGCTGATAGAAATCCAAATTTTCTTCATTCGTTGGTTCATTTGATTGTTCTTTTTGGACAAGCATGTGTTGATCTACCTTATGTTTCTTTTTTTTTTTTTGCTCTTTTTAATTCTTCAGCACTTTTTTTGTGCTAGTGCCTGAAATGCTAATGGCTTTTCTATACCAAGCTTTCCTCCTGTTTGTTTCTTTAGTGCACATGATGTCTTACACTTGATCTCTGAACTTCAGGTAAGTTCATATGTGGACATATTTCATTGCTGATGCACTACCTACCTTTCCCCCCTTATTTTTTTGTTGATAATTCCAGTCACTAATAAAATATTTGGTTTCATTTTCTAGCATTGGTAAACAGCAGATTAATTTTAAGTTTTTCTTGTTGTTTTGGAGAGTCTTGTGTTACCATTTCCATACTTGATTTACTTCCCAGTATGTTTGTTTGTAAATTCCTAGTTGCTTTGTTCTACTTTTTTTCTCAGTACTGATTTTATTGGCTAATTGAAATGCATACCATCTATGTTGATGTACTTGCATTCTGCGTATTCTTGCTTTTTGAGAATAAATCTCGAACTTCCAGAGCGTGTTTGGTTGCTATTTTTTATTTGCGTGGAGAATATTATTATATGTATATGCAATGTTTCTGAACTTGTCTGTTTGAGGTGTTTTGTAGGCCTCCCCATACCAATAAACAAATGGAAAATTGTAAATGCACTTAACTGTGATTTAAATTCTGAATGATTTTGCAGTCCAAGTCCCGTGGTGGTTCTTCAGAGCCCAAAGACAGAAAAAGCTCTTCAGAGCACAAAGACCGAAGAAGCTCTTCAGAGCAGAAAGACAGAAGAAGCCCTTCAGAGCGCAAAGGTAGTAATCATGGTAAGGGAGAAAGTAAAAGCAAGAAACGGTCAAGTACTAGCAAGGATGCCAGTTCTCCTGATAGAAGCTCTGCTGAGCCGTCAGAGAAGCAGCTCTATGACAAACACAAACAAGGGAAGGGAAAGTTCCACATGATCATTAGTGGGGCCAAGAAGGAACCTCCTCGGAATGTCACTGCGGATGAAGCTGCTGCTATTGTTATGGCAGCTACTCGTGGATTTGGCCCTGCCAATATTCAAACAAACACACTGAAGGACACTAGTGGAATTGGTCAGACCCGTGGAGATAATGGACATACTTCAAGCTTTGGAAGTTTCTCCTCTTTACAGGACCCAGATGTACCATCCAAACCTGTTTCAAATAGTGAGGCATGTACCTCACTCACAAGTAGTGGTCAGCCTAAAAATGAAGGCACTGGAATAATTGATGATGATTGGATTGCAAACACTATCGCAAAAGCTGCTGCTGTTGCAGCCTCTAAAGAAGCTGATTCTTCTGAAGCATCCATGACAAAAGAGCAGAAGCTGAAGGCTGAGAGGCTTAGACGTGCAAAGATGTTTACCTCTATTATTAAGAGTGGTGGCAGCAAGATGGCTGATTTGTCAACTTCAGCTGATCAAACTAATGAAGCTGGAAGGGCCTCTCCTGGTGATTTGAACTTATCTGAGTCTGATCCACAACCATCAGCTAAGGAACGTGAAGGTAGCTCTGTGCCATTTGAACGTGAAGGCTCTAATCTGGCCAAGCAGGAGAAAGACTCTGATGACGAACGGAACAGGGCAAGGAAGTATAGGAAAAAACATCACCCAGAATCTGACGAGGAGAACTATGATTCAGAGGAGAGCTATAAACACTCTAGGAAGAAGCACCGTTCAGAGGATTCAAGAGCTCATACTAGTGATGTTCACAAACATAAGCTCAAGAGACACTCCAAGGATCTGGAACCCAGGCATCATAGGCACCGTGATAGCTCTTCAGAAGATGAGCATGAGCACAGGAGCTCCAAGTCAAGGCATCGTCACAGGGATGACTATCACTATCACGAGGATGATGAGCATAGGAGTTCACATAGACACCAGAGGGACCACCGTTCCAGTTCAAAAAGGAAAAAGGACGATGACCGAGATAAGAGCAAACAAACTATAGTTCTCCCAGAAGTCTCCCAGAACCAGGAAAAGCCCCCTGGTGACACTGCTCAATCCTCCCAGGCAACAACTGAAGTGCCGAGTGAGTTGAGAGCAAAAATCAGAGCAATGTTGCTAGAAACACTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004264