BGIOSGA004274

From RiceWiki
Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004274| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004274, complete gene.| tag = OsI_034...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004274

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004274, complete gene.

LocusTag

OsI_03408

Ensembl Transcript ID

BGIOSGA004274-TA

Ensembl Protein ID

BGIOSGA004274-PA

Length

1681

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32296506..32298186

Sequence Coding Region

32296506..32297393,32297491..32298186

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32296506..32298186 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32296506..32298186 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACCAGCAAACGTTCTCTACGCTGCATTGCTTGTGCCAATGGTGCTGTACCTAGCCGTCACCCGGCGGCGCAGCCGCCGCTTGCCACCCGGACCGGCGGGGCTTCCCCTCGTTGGCAGCCTCCCTTTCATCGACCCAAACTTGCACACCTACTTCGCGGGCCTCGCCGCCAAGCACGGGCCCATCCTCTCCATCCGCCTCGGCTCCAAGGTGGACATCGTCGTCACTTCCCCGGAGCTAGCCCGCGAGGTGCTCCGTGACCAGGACTCCGTCTTCGCCAATCGGGTCATGCCGGACGCCGGCAACGCGGTCTCCTTCGGCGGCGTGCAGAACATCGTGGGCAACCCTGTCGGGCCCATGTGGCGCCTGCTCCGCCGCCTCTGCGTTCACGAGATGCTGAGCCCGTCGGGGCTCGCCAACGTGCACGATCTCCGCCGGCGCGAGTTCAGGTCGACCCTACGTTACCTCCACACGAAGTCCGGCGAGCCTGTCGATCTCGGCGCACAGATGTTCCTCAACACCATGAACGTGATCACGAGCGCCATGTGGGGAGGCACCATCGGGAGCGAGAGCGAGAGGGCGGCAGTGGGGAGCGAGTTCAGGGGCCTCGTCGCGGAGGTCACCGAGCTTCTCGGCACGCCCAACGTCTCGGACTTCTTCCCGGCGCTGGCGCCGTTTGACCTGCAGGGCATCCGGGGCAAGATGGAGCGGTTCAGGTCACGGTTCGACCTGATGTTCGCCAAGATCATACAGCAGCGGATGAAAGCCCAGCAGGACGGCGGCGAGACGGCGACGGACTTCTTGGAATGCATGCTCAAGATGGAGAAGGAAGGCGGCGACGGTAAAGCCCCCTTCACCATGGACAACGTCAAGGCCCTCCTCTTGGACATGGTGGTCGGCGGGACGGAGACCACGTCGAACACCGTGGAATGGGCCATGGCGGAGATGCTGCAGAACCCTCAGGTGCTAAAGAAGGCGCAGCAAGAGCTCGACAGCGTCGTGGGCCGGGACGAAGTGGTGGAGGAGTGGCACCTCCCGCAGCTCCACTATCTCCGCATGGTGATCAAGGAGACGCTCAGGCTGCACCCGGCGCTGCCCCTGATGGTGCCGCACAGCCCGAGCGCCGCCTCGACGGTCAGTGGCTACCACGTTCCCGAGGGCAGCCGCGTGTTCGTCAACGTCTGGGCGATCCAGAGGAATCCTCTGGTTTGGAACGAGCCACTCGAGTTCAACCCTGAGAGGTTTGCTGGGGACGAAGGCCACAAGTGGGACTTCACCGGTAGCCAGTTCGACTACTTCCCGTTCGGGTCCGGTCGGAGGATCTGTGCTGGGATAGCCATGGCGGAGAAGATGACGGCCTACTCGGTCGCCATGCTGCTGCAGGCGTTCGACTGGAAGCTGCCGCAGGGCGTTCAGCCTGACCTGTCCGAGAAGTTTGGGATCGTGATGAAGAAGGCCGCGCCGCTGGTGGCAATACCGACACCAGGTTATCTAAGCCTGAGCTGTACTATTAGTGAAGCCAGCTTTTACCTCGCAAAAAAAAGAAAAAAGCATGTCCAGCCGGCGCAACCCAATTCATAG</cdnaseq>

Protein Sequence

<aaseq>MAPANVLYAALLVPMVLYLAVTRRRSRRLPPGPAGLPLVGSLPFIDPNLHTYFAGLAAKHGPILSIRLGSKVDIVVTSPELAREVLRDQDSVFANRVMPDAGNAVSFGGVQNIVGNPVGPMWRLLRRLCVHEMLSPSGLANVHDLRRREFRSTLRYLHTKSGEPVDLGAQMFLNTMNVITSAMWGGTIGSESERAAVGSEFRGLVAEVTELLGTPNVSDFFPALAPFDLQGIRGKMERFRSRFDLMFAKIIQQRMKAQQDGGETATDFLECMLKMEKEGGDGKAPFTMDNVKALLLDMVVGGTETTSNTVEWAMAEMLQNPQVLKKAQQELDSVVGRDEVVEEWHLPQLHYLRMVIKETLRLHPALPLMVPHSPSAASTVSGYHVPEGSRVFVNVWAIQRNPLVWNEPLEFNPERFAGDEGHKWDFTGSQFDYFPFGSGRRICAGIAMAEKMTAYSVAMLLQAFDWKLPQGVQPDLSEKFGIVMKKAAPLVAIPTPGYLSLSCTISEASFYLAKKRKKHVQPAQPNS</aaseq>

Gene Sequence

<dnaseqindica>1..888#986..1681#ATGGCACCAGCAAACGTTCTCTACGCTGCATTGCTTGTGCCAATGGTGCTGTACCTAGCCGTCACCCGGCGGCGCAGCCGCCGCTTGCCACCCGGACCGGCGGGGCTTCCCCTCGTTGGCAGCCTCCCTTTCATCGACCCAAACTTGCACACCTACTTCGCGGGCCTCGCCGCCAAGCACGGGCCCATCCTCTCCATCCGCCTCGGCTCCAAGGTGGACATCGTCGTCACTTCCCCGGAGCTAGCCCGCGAGGTGCTCCGTGACCAGGACTCCGTCTTCGCCAATCGGGTCATGCCGGACGCCGGCAACGCGGTCTCCTTCGGCGGCGTGCAGAACATCGTGGGCAACCCTGTCGGGCCCATGTGGCGCCTGCTCCGCCGCCTCTGCGTTCACGAGATGCTGAGCCCGTCGGGGCTCGCCAACGTGCACGATCTCCGCCGGCGCGAGTTCAGGTCGACCCTACGTTACCTCCACACGAAGTCCGGCGAGCCTGTCGATCTCGGCGCACAGATGTTCCTCAACACCATGAACGTGATCACGAGCGCCATGTGGGGAGGCACCATCGGGAGCGAGAGCGAGAGGGCGGCAGTGGGGAGCGAGTTCAGGGGCCTCGTCGCGGAGGTCACCGAGCTTCTCGGCACGCCCAACGTCTCGGACTTCTTCCCGGCGCTGGCGCCGTTTGACCTGCAGGGCATCCGGGGCAAGATGGAGCGGTTCAGGTCACGGTTCGACCTGATGTTCGCCAAGATCATACAGCAGCGGATGAAAGCCCAGCAGGACGGCGGCGAGACGGCGACGGACTTCTTGGAATGCATGCTCAAGATGGAGAAGGAAGGCGGCGACGGTAAAGCCCCCTTCACCATGGACAACGTCAAGGCCCTCCTCTTGGTAATTACTCGTTCCTAACATACCGTTGAGCAAAGTTCCTAGTACAGCAAGCCTAAATTAAAATGCTTCCACTAATCACCATGTACGTCGTCAACAGGACATGGTGGTCGGCGGGACGGAGACCACGTCGAACACCGTGGAATGGGCCATGGCGGAGATGCTGCAGAACCCTCAGGTGCTAAAGAAGGCGCAGCAAGAGCTCGACAGCGTCGTGGGCCGGGACGAAGTGGTGGAGGAGTGGCACCTCCCGCAGCTCCACTATCTCCGCATGGTGATCAAGGAGACGCTCAGGCTGCACCCGGCGCTGCCCCTGATGGTGCCGCACAGCCCGAGCGCCGCCTCGACGGTCAGTGGCTACCACGTTCCCGAGGGCAGCCGCGTGTTCGTCAACGTCTGGGCGATCCAGAGGAATCCTCTGGTTTGGAACGAGCCACTCGAGTTCAACCCTGAGAGGTTTGCTGGGGACGAAGGCCACAAGTGGGACTTCACCGGTAGCCAGTTCGACTACTTCCCGTTCGGGTCCGGTCGGAGGATCTGTGCTGGGATAGCCATGGCGGAGAAGATGACGGCCTACTCGGTCGCCATGCTGCTGCAGGCGTTCGACTGGAAGCTGCCGCAGGGCGTTCAGCCTGACCTGTCCGAGAAGTTTGGGATCGTGATGAAGAAGGCCGCGCCGCTGGTGGCAATACCGACACCAGGTTATCTAAGCCTGAGCTGTACTATTAGTGAAGCCAGCTTTTACCTCGCAAAAAAAAGAAAAAAGCATGTCCAGCCGGCGCAACCCAATTCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004274