Os09g0108600

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Revision as of 07:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0108600| Description = Similar to Aldose 1-epimerase-like protein| Version = NM_001069100.1 GI:115477939 GeneID:4346383| Length = 5202 bp| ...")
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Gene Name

Os09g0108600

Description

Similar to Aldose 1-epimerase-like protein

Version

NM_001069100.1 GI:115477939 GeneID:4346383

Length

5202 bp

Definition

Oryza sativa Japonica Group Os09g0108600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:764280..769481

Sequence Coding Region

765161..765172,767481..767607,768665..768769,768842..769464

Expression

GEO Profiles:Os09g0108600

Genome Context

<gbrowseImage1> name=NC_008402:764280..769481 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:764280..769481 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttacggttggagaatggcacttcaccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagtttactttaaatgataagcagtatagtctggctatcaacaaccctccaaacactcttcatggtggatttaaaggttttgacaaaatcatctgggaagttgctgaatatgtcaaaggggagaacccatcaatcaccttcaaatattacagtaaagatggagaggaaggtttcccaggagatgtttctgtcaccgctagatattctattctggcaagtacgacactgaagttggagatggaggctatacctttgaataaggccacacccatcagtttagcacagcacacctactggaacctggcaggccacaactcaggagatgtgcttgcacatactgttcagattttggggtctcagataacaccggtagatgaaacctcaatacccaccggtgagatgatgccagttagtggctcacccttcaatttcctgacagagaccacaattggcagcaggattgatcaagtccctggtggctatgatcacaactttgtgattgattgtggtgaagtgaagtcaggtttgtgccatgtggcgaaagtgacagacccttcaagctccagggtccttgacatttgggcagatgcacctggagtgcagttctacactggaaatttcctcaatggcattgtgggcaaaggaggcgcagtctatgggaagcacgccggcctgtgtcttgagacccaaggtttcccaaacgcagtgaaccaacctaattttccctcggtggtcgttcagcctggtgagaagtatagtcatacgatgttgtttgagttttcaacaaaatga</cdnaseq>

Protein Sequence

<aaseq>LRLENGTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNT LHGGFKGFDKIIWEVAEYVKGENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLK LEMEAIPLNKATPISLAQHTYWNLAGHNSGDVLAHTVQILGSQITPVDETSIPTGEMM PVSGSPFNFLTETTIGSRIDQVPGGYDHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDI WADAPGVQFYTGNFLNGIVGKGGAVYGKHAGLCLETQGFPNAVNQPNFPSVVVQPGEK YSHTMLFEFSTK</aaseq>

Gene Sequence

<dnaseqindica>882..893#3202..3328#4386..4490#4563..5185#aggcgaagccaaacccacataacgaacgcagcgctccctgcgaaagctgagaggagagctccggaggaaatggagcagcttgtgggagttcaccaccaccattcttcttcctcctccctctccccgcggactccatctccaacccacccactcccgcatctcctgcgcctcccttccagctccaaccggctccgcccaccggatcacccccactcctctcatcctgtctccaagctcctccgcgtcacccctcccttcttccttgtcctcctcgccgccgtctacctcctcgcctccttcactatcttctcctctcccgctgcctcgctccgccccaccaagaaccgccccaagctcctcctccccatgcccgccccctctccccctccccccgacctctttgagctccacggtggcaggatccgggcctggatcaccaatgtcggcgccaccgtcacctcgctcctggtcccagataacaatggtgctgcctcgctggatatttttgctcttcttgtcttctttcttgcgctgcttgggattgattcacggtgttgtttgagtttttgtcaggggttcttggtgatgtggtgcttggattcgattccctggatccttatcaggtcagttgctgatgcgtatttctagacgttaattagcctgttcgaggcttactttttttttttacatctttgtggtagtaagtgtgacgactaggctggagattttttcatcttttcacatgtcgatgtctagtagaattaaatactgatgatggggcacagtacatgagttttgtttgtttttcttttccaggagaaatgcagcacatttaatgatgcatgcctgaataacttgaagctggttactagtactagtaattacggttggaggtataatctgataattaaattatatgtttagtttgcagtctgtagcacttttacctgtctactggaagtaaactagtaaaaagaacattccacatcagttttgatcattacttgtcggagcttttaaatcgtccgtaagtatgaaagtgaagtataaaaagttactgaaataattaagtatccagttagtaattcccttcatatccattttgtacccctctaaaatatatttatggcatgcttattagtcacttctgagaaattctctccttaatcgaagaaaatttggtgataaaatcataggactgagttataacaactttgatctgatctctgcattgatcttgtttcatgtttgcttgctttcccaagttacaaattgtcaaaaaaggaaaattgatcaggaatgaggattgctcacatgggttcagctgcctaaagaaattccaaacatatattgggttaggaaacattaaatgcattcacttatcaattgtacctctcttttaatttaccttttcttcccttttgtaatgatcctttgatcatcatggggtaaacatccatcacagagagtttggttggtgacaacttgaagtcgagtggctttgtgaaggatttccccatttggggaggaatagattcagacaagatggccatgggaaagaccggcacttagagttttagggaccagggatttgtttatttatctttgtttggctaatagagatgattttctgatccttagaaaggggtaacttgactttcaagaagataatcttacaaatctaatcctatctctaaattaacgaaactaatattatagtacagtaacacgttcacacatggataatgcacattttctaacaagcagctctcgctagaaaggttagtgtgattcacagcatgtgaatttggcacataggaaaacatgttgtattcttaagtgtgtcggcatgttaccaattcctttttcatgtttttgattgtgttattcctattgaagtgtatggggagagatgtactgtgaatattggacgattgtatttagcctcggggtcccggtatatataggagtacatgtagaggagataaggaaggagtccatacaaatcaatcatatcctaatatatctctaattaccatattacaattccctatagctgataattcatattagcgcctttatgactgttctcttggactttgtaaatcatatggtttaaagtgatgatttcttcttttctattttcccatctaatcaatcaataaaagtatcagtgtatgggttagcgtctagcctactactacatcataaggctaatatcatcatcaatcatgctgttcacagcattgagttcataactaccaaattgtgctttttaagaaacttcagtatttgttctgctacattatgtattggcagcataactttggatggtagtctcatagcacataatctagaaattaacattcaaatgatacaacactcattgagttttcctaacattgttttgtggtcactaatttctaagtcataaaaaaaccaatatattagattgctgtatggatatttatgatgagttttacttcatcaatacttaattgcagaatgaggtggtgttctagcacttgttttataaataattaataaaattgtggccgtgcgacatgttacatgtcaattttttataggcagcccccaaaaaaatgcagcatagcaaacaccaattgcattttgtctaattaccctatggtggccagctgttacttcaagcacctgaaactgacctcacgagcctttattgttgaaacttctatgaatcttacatttggtctatgtttcgtctacaattgtgtgatcccttttagaactcttcgtggaacttgttaaaacaaggataaaaattccaaacatgcaaattcaacaacttcttgaaatttctggaaacctgcttctaactcctatggaacttgaagctattgtctgaaactcactgaaacatgcttggaaatatggctaggtccccatcgtttggcatattcatatgcttatcagccaaaatttgaattttcaacgttaaatttggagctaattttggggttttttcatcgaagtttatttttcagcctttgcttttagatctctaagaacacatatataaaagttttatttacaaattacttttcgtttgcaaatatgccatttggcttattccaccaatatgccaaacgatggcacccctattttttaatatgcttatataagttggtttggcactgatggtttgagttttcctatgatcagaatggcacttcaccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagtttactttaaatgataagcagtatagtctggctatcaacaaccctccaaacactcttcatggtaagacataaggtactctgcataaattcattgttttgtgcatatttcaggcatacatgcgtaagtaatagtgaactattgcctgtttgtccttgtgtgaatcatctgttgctgatcaagtgtacatgataatgatatttctgctggatttacttaatatccattttttattacctcctaatatttctaattaatcctagaggaactgtcccattaatactgagttaatgggattactagatccaccacccttgaaaaaactaaacctacttgttacttgatgtttctttatattacgaccaagtatggatatttaccttgtcgaatcatcagtacggtctattttctgtagcagtttgtgttagtgtagctgcccggtttggaaattattcttgttcggttccattcccttttgccaagccacaatagtaatctgttcttggagttcatattattgctccatgagttaccttattcaaaggtgtagtccccccaaaaagtacatttgaaagaaaattatgagttatttggccaatagtttacactcttacacctgatactagcaacagcaatgacaagcaaacagcaatatgaacagttggcttgctgtggtgaagatgactcacctgattagtcgctctattgaaatgattctctttctttttttgaatttatatccttaacaatgttagatattgagaaatgtttgacttgtaccattcactgaatttggatctggctgtgaatttccctgatacttttattccgtctcttatttgatacatctcatccatgttaatgcttcattcaagaaacatgcaaaaatgcatatttggtgtattgtgtggtgggcgggtgtagttcttaatttctcaacaagaatggctcatttgcattcaatctttcataacggaccttgcattttttcatattttcgtcctaatctaactgcacgcatgcatgcatagaggacaaaaactcaaaaagagatatatgccactgcagctatttcaatttggtcttctttaaactaatgcaactgaatatgggatctcaggtggatttaaaggttttgacaaaatcatctgggaagttgctgaatatgtcaaaggggagaacccatcaatcaccttcaaatattacagtaaagatggagaggaaggtattttaaaaacttccggaaaacaagcaactatgtaagtgccaggactgattttaatttttcacaaaacaggtttcccaggagatgtttctgtcaccgctagatattctattctggcaagtacgacactgaagttggagatggaggctatacctttgaataaggccacacccatcagtttagcacagcacacctactggaacctggcaggccacaactcaggagatgtgcttgcacatactgttcagattttggggtctcagataacaccggtagatgaaacctcaatacccaccggtgagatgatgccagttagtggctcacccttcaatttcctgacagagaccacaattggcagcaggattgatcaagtccctggtggctatgatcacaactttgtgattgattgtggtgaagtgaagtcaggtttgtgccatgtggcgaaagtgacagacccttcaagctccagggtccttgacatttgggcagatgcacctggagtgcagttctacactggaaatttcctcaatggcattgtgggcaaaggaggcgcagtctatgggaagcacgccggcctgtgtcttgagacccaaggtttcccaaacgcagtgaaccaacctaattttccctcggtggtcgttcagcctggtgagaagtatagtcatacgatgttgtttgagttttcaacaaaatgatccagttcttgtaggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0108600, RefSeq:Os09g0108600