BGIOSGA004282

From RiceWiki
Revision as of 11:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004282| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004282, complete gene.| tag = OsI_034...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004282

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004282, complete gene.

LocusTag

OsI_03423

Ensembl Transcript ID

BGIOSGA004282-TA

Ensembl Protein ID

BGIOSGA004282-PA

Length

3978

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32427937..32431914

Sequence Coding Region

32427937..32428080,32428701..32428777,32429296..32429335,32429693..32429833,32429933..32430019
,32430262..32430378,32430472..32430560,32430805..32430856,32430963..32431058
,32431131..32431175,32431298..32431387,32431460..32431531,32431786..32431914

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32427937..32431914 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32427937..32431914 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGTGGTGGCGAACGGCGCGAGCGGCGACTCCTCCAAGGCCGCGTTCGCGGAGATATACAGCAGGCTCAAGGAGGAGATGCTCGAGGACCCGGCCTTCGAGTTCACCGACGAGTCGCTCCAGTGGATCGACCGCGAAGGGGGGCACAAAATTCTTGTTGAGTATTTTGATCTTTGCCTAAGTACATCTTTTGGAATATTTAGATCGATAAGATGGATAAAGGAGTTGAGGGTGGCCCAAAGTGCCACAAAGATGCTGGATTACAATGTGCTCGGAGGAAAGTGCAACCGCGGGATCTCTGTCATTGATAGTTTCAAGATGTTGAAGGGCACTGATGTTCTGAATAAGGAGGAGACATTTCTTGCCTGCACCCTTGGTTGGTGCATTGAATGGCTTCAAGCTTATTTTCTTGTGCTTGATGATATTATGGACAACTCTCAAACACGACGTGGCCAGCCTTGCTGGTTTAGGGTGCCTCAGGTTGGGCTCATTGCTGTAAATGATGGTATTATCCTTCGCAACCATATTTCACGAATTCTTCAACGCCATTTTAAAGGAAAGCCGTATTATGTTGATCTCATTGATTTGTTCAATGAGGTTGAGTTTAAGACTGCTTCAGGTCAATTGTTGGATCTTATTACTACTCATGAGGGAGAAAAGGATCTCGCAAAGTACAACTTGACAGTTCACCGCCGCATTGTTCAGTACAAGACAGCTTACTACTCATTCTATCTTCCGGTTGCATGTGCTTTGCTGCTATCTGGTGAGAATTTGGATAACTTCGGTGATGTTAAGAACATTCTTGTGGAAATGGGGACATACTTCCAAGTTCAGGATGATTATCTAGATTGTTATGGTGATCCTGAGTTTATTGGCAAGATTGGAACGGACATTGAAGACTACAAGTGCTCATGGTTAGTTGTGCAAGCTCTCGAGCGTGCTGACGAGAACCAAAAGCACATTCTATTTGAAAATTATGGGAAGCCAGATCCTGAATGTGTTGCAAAAGTGAAGGATCTGTATAAAGAACTTAATCTGGAGGCCGTATTTCATGAATACGAGAGGGAGAGTTACAATAAGCTGATTGCCGACATCGAAGCACATCCGAACAAAGCAGTTCAGAATGTATTGAAATCCTTCCTGCACAAGATCTACAAGAGGCAGAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAVVANGASGDSSKAAFAEIYSRLKEEMLEDPAFEFTDESLQWIDREGGHKILVEYFDLCLSTSFGIFRSIRWIKELRVAQSATKMLDYNVLGGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKPYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLAKYNLTVHRRIVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNKLIADIEAHPNKAVQNVLKSFLHKIYKRQK</aaseq>

Gene Sequence

<dnaseqindica>1..144#765..841#1360..1399#1757..1897#1997..2083#2326..2442#2536..2624#2869..2920#3027..3122#3195..3239#3362..3451#3524..3595#3850..3978#ATGGCGGCGGCGGTGGTGGCGAACGGCGCGAGCGGCGACTCCTCCAAGGCCGCGTTCGCGGAGATATACAGCAGGCTCAAGGAGGAGATGCTCGAGGACCCGGCCTTCGAGTTCACCGACGAGTCGCTCCAGTGGATCGACCGCGTAATGCTCTCTTCCCCGTCTCGATCCTTTATGCTGGGAGGGATACGGATGTTGGTTTTTGATCTGGTTTAGCGAGAGGGGAGGGAGGGGGTGGCGTTGATGCCTACGTGCTCGCGTGACGCGTCAAAGGCTTTTGGAATTTCGCCGGGTTTTCTGGGCTTACGAGTGGCGCTTGGCTGGTGGATTCGCTCGGTTATTGGTATATGTGTTTCCTGATGGTAGAATGTTAGGAGTATGGAGTATGCGAGCAATGACTAGGGGGTAACGAAGTAAGTTTACGTCTCACATACAGATCGATATGGTGTGTTGAATTGCATAGTGGGTCTGAACTCTGAGCAACAGAGCGAGTAATCTCTCTCTCTTAGCTGTTAACAAGAGTAGGTGAACAAGGAAGGCAGGGCTTTTCTAGGCTACAGTGATTGATCGATCAACTTGTTAGGAAAAGCCGGACAGGAGTGTCTTTTTTTACCTACAGTCGCTGGTGAAGTAGATCATATAAAGTCACCTTATGAACTTTAAGCATACGGATTTCATTTCTGTTGTACAACAGATCCTTTAAAAAATTAGTAAAGCTAGCCTTTTGGACACCATGTTCTCTTTTATTTGTGTGTGTGTTGGAGGAAGGGGGGCACAAAATTCTTGTTGAGTATTTTGATCTTTGCCTAAGTACATCTTTTGGAATATTTAGATCGATAAGGTGAAAATGCTGTGGGTTTCCTTGACATAAAAGATGAACTCACCGTATGTTGAGTTGTTCTATATTGCAGCAAAAACGATCTATCAAAGCTGCATCTCCTTAACCGTGGAAAGTTAAAAAGAGCTAGTTGTTTTTACTACTTTGCATGTCAATATTTCAGATCCAAGCTGCATCTCCTTAACCGTGGAAAGATAAAAAGAGCTAGTTGTTTTTACTACTTTGCATGTTAATATTTCAGATCCCGTTGGTTAGACAGTATAAATATTACAGATGTTCCTTCAAAAATAGAGTAAATTTCACTTTGGGCCACCTTTTATTACTAATGTTTCGCTTTGGACCATCCTTTGACCAATGTTTTCACTTTAAACCAGGTAAATCTTGCCTCTGTTTCACTTTGGGACACCCCAACTCTCTTCTCAAGCATATGAATGACCTCGAGTATGCCGGCTCATACTCGTCAATAAACTCCCTCAGCTATATGTAGATCATTTCTTTGACATATGACAAATTGAATGCAGATGGATAAAGGAGTTGAGGGTGGCCCAAAGTGCCACAAAGGTAAATTATCCGGTCCAAAGTGAAAGCATTGGTTAAAGAGTGGTCCAAAGCGAAACACCAGTAATAAAATATATATAGGTGAAAAGCTGGGGAGCACAATACATTGTTCAGGTGTATTCTAAAAGTTTTACTACCTTTTACTGTTAATGACACAACAGTAGTAGCTAAGTGTAAATGATTGGTTGCTGATGGTTTGTTTCTGTTGTTTGATTTTTATCCTCTACCTATTACCATTTCCATTTCCATTTACCATTGTTATTTATTGTGTATTGATATCAGAATCATACCCACAGAAATTGGACATACAGTATATTTGAGTATGTTAAAGTAGTTGACATTTTTTTTTATCCGGAGCAGATGCTGGATTACAATGTGCTCGGAGGAAAGTGCAACCGCGGGATCTCTGTCATTGATAGTTTCAAGATGTTGAAGGGCACTGATGTTCTGAATAAGGAGGAGACATTTCTTGCCTGCACCCTTGGTTGGTGCATTGAATGGGTAATGTTTTCTCCAAATGCTATCTTGTAGGATGTTTGTTAGCCAAGTGAAGTTATATGCTAAGTGTGGCACCACTGATGGTTCTGCATAATTTTGCAGCTTCAAGCTTATTTTCTTGTGCTTGATGATATTATGGACAACTCTCAAACACGACGTGGCCAGCCTTGCTGGTTTAGGGTGCCTCAGGTCAGTAGCAGAACAATCATCCTTTGTACGCATCAATTTTTTTATATATATATTTTTTTATGACTGTATGAATTATAATCCAGAATTGCACAGGCATTGAGAAAAAAAGGTCATGCATTAAGTAATTGATTCATGTTCCCTTTTTTCAATCCTTGTAAGGAGTGTGATCAGATTAGCACAATGTTGAATTGCTATCTGTTACCTATAAAACTAAATTTGTGTATTTCATTGTTTTGCAATAGGTTGGGCTCATTGCTGTAAATGATGGTATTATCCTTCGCAACCATATTTCACGAATTCTTCAACGCCATTTTAAAGGAAAGCCGTATTATGTTGATCTCATTGATTTGTTCAATGAGGTAAGTTGTATCTTCTGACATGCACATATTGTTGGGAAAAAAAATACTGTACGCTTCTCCCTGATGCCCAGTTGTATGTTTTTGTTTTGTTAGGTTGAGTTTAAGACTGCTTCAGGTCAATTGTTGGATCTTATTACTACTCATGAGGGAGAAAAGGATCTCGCAAAGTACAACTTGACAGTGTAAGTTCATTTTGCATTTACGTGTTTGTTTCTTTCTTTCTTTGCATGATTTCCTGTCCATTTGTTTCTAAAAATAAGGTTCAAACAAAACAAAGGAACGGAAAAAATAGCAGATAGTTCCTTTTCTGCGTTCCATGTGTAGTTTCTAGAATGAGTTGTATTTGCACTATATTTTATTTTAGCGGTTCAGAATTGGGTTATGATCTTCATTTAATGGTGTTCTTTTAACTGACATATTGTGCAGTCACCGCCGCATTGTTCAGTACAAGACAGCTTACTACTCATTCTATCTTCCGGTAGGATTTACCATTCTCCTATGGATTTTTTTCCATCTTTAAACTCTCACTTCGGTAATCTGCGAATAGTTGTCATCACTAGCAATAATATTTTTCTTTATCCAAGGTTGCATGTGCTTTGCTGCTATCTGGTGAGAATTTGGATAACTTCGGTGATGTTAAGAACATTCTTGTGGAAATGGGGACATACTTCCAAGTTCAGGTACCTTTTCACCTTGTTGGTTGTGAATTTATATATTACTGGACTACCGCACTAATACGAGTTTTCTCACAGGATGATTATCTAGATTGTTATGGTGATCCTGAGTTTATTGGCAAGGTTAGTGTGCCCGTTGTGGTTGTACTAATCCCAATGAGTATGGCTACTGCCAATCGGTCCATTGCTGTCCAGGCTTATTTTATCTGTAGCTTATGATCTGATCAGTAGAAATCTTAATGCAGATTGGAACGGACATTGAAGACTACAAGTGCTCATGGTTAGTTGTGCAAGCTCTCGAGCGTGCTGACGAGAACCAAAAGCACATTCTATTTGTAAGTATTATTAACTTTGTAGTTTTTATCAGCCCATGGGCACCATCTGAATCCTTTATGTCTAATTGACAGGAAAATTATGGGAAGCCAGATCCTGAATGTGTTGCAAAAGTGAAGGATCTGTATAAAGAACTTAATCTGGAGGTTTGTCTTAACCGTTCTCTGTATTTATGTTCTGTGTATCATCATCACCTGAGTAAACATATGCAGACATCATACGCAGGTGTGAAAAAGAATAATTACCATCCCAACTCGATAAGGAACAAAACCTAGAACTCAGTTGTTTTTTTAAGAATAAGAAGGAACTCATTTGTTGAAGATGCTTGAAACAATAATTCAGAATTTCTCATTTATCCATTGCAAGACCTGAGGCACTGCTTTTATCTGTTATACTGCAGGCCGTATTTCATGAATACGAGAGGGAGAGTTACAATAAGCTGATTGCCGACATCGAAGCACATCCGAACAAAGCAGTTCAGAATGTATTGAAATCCTTCCTGCACAAGATCTACAAGAGGCAGAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004282

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004282&oldid=42006"