BGIOSGA004299

From RiceWiki
Revision as of 11:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004299| Description = cDNA clone:J023135J09, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA004299, complete gene.| ta...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004299

Description

cDNA clone:J023135J09, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA004299, complete gene.

LocusTag

P0692C11.36-1

Ensembl Transcript ID

BGIOSGA004299-TA

Ensembl Protein ID

BGIOSGA004299-PA

Length

2861

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32607624..32610484

Sequence Coding Region

32607624..32607717,32607828..32607886,32608122..32608310,32609502..32609672,32610332..32610484

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32607624..32610484 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32607624..32610484 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGAGGTGTTCGAGGGCTACGAGCGGCAGTACTGCGAGGTGTCCGCCTCCCTCTTCCGCAAGTGCACCACCGCCTCCGCCCTCGATGGAGAGAAAAAGAAGCAGAAGCTGTCCGAGATTCAGTCCGGCGTGGAGGAGGCTGAGTCGCTGATTCGGAAGATGGACCTGGAGGCGAGGAGCCTACAACCGAGCGTGAAGGCCGGTTTGCTTGCGAAGCTGAGGGAGTACAAATCTGACCTCAACAATCTCAAGAGTGAGCTTAAGAGGATCTCGGCGCCCAATGCAAGGCAGGCTACACGGGAGGAGCTCCTTGAGTCAGGCTTGGCTGACACTCTCGCGGCGTCTACTGATCAGAGGGGAAGATTGATGATGACAACAGAAAGACTGAATCAGTCCAATGATAAGATTAAAGAGAGCCGAAGAACCATATTGGAGACAGAAGAACTTGGTGTGTCAATTCTTCAGGATCTTCATCAACAACGGCAGTCACTGCTGCACGCTCATACTACTTTGCATGGGGTTGATGATAATGTTGGCAAGAGTAAAAAGATCCTGGCGGCAATGTCAAAGAGGATGGACAGGAACAAGTGGATCATTGGGGGGATAATTGCAGCTCTTGTTCTAGCCATCCTTCTCATACTGTACTTTAAGCTCGCTTATTGA</cdnaseq>

Protein Sequence

<aaseq>MSEVFEGYERQYCEVSASLFRKCTTASALDGEKKKQKLSEIQSGVEEAESLIRKMDLEARSLQPSVKAGLLAKLREYKSDLNNLKSELKRISAPNARQATREELLESGLADTLAASTDQRGRLMMTTERLNQSNDKIKESRRTILETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNVGKSKKILAAMSKRMDRNKWIIGGIIAALVLAILLILYFKLAY</aaseq>

Gene Sequence

<dnaseqindica>1..94#205..263#499..687#1879..2049#2709..2861#ATGAGCGAGGTGTTCGAGGGCTACGAGCGGCAGTACTGCGAGGTGTCCGCCTCCCTCTTCCGCAAGTGCACCACCGCCTCCGCCCTCGATGGAGGTAACCGACCGATCCCCTCTAGTCTAATCCCGATATGCCATCGAGATCTTACGCGGAGGAGTTTCCCCCTTTTCTTGGAGTACGACTAATCGGGTGTCCGATTTCTGCAGAGAAAAAGAAGCAGAAGCTGTCCGAGATTCAGTCCGGCGTGGAGGAGGCTGAGTCGCTGGTAAATATCGAACCCATTTCTTTGGGATCCCTAACCTGCATCATTATGAGGAGTACCATTCTAGTATTGACTTACATTCAGCGGTAGGTTAGCAGTTAAAAAAGGCTGGTGATTTTGATATGCGGATGCATACTTTTTAGTAGATACCTGCTATTTATAACGGTGTAAATGTATGTTTCATCTGGGGTACAGGTGCAGTATTTAACGTTTTATTTGTATGGGTTTGTGCATACAGATTCGGAAGATGGACCTGGAGGCGAGGAGCCTACAACCGAGCGTGAAGGCCGGTTTGCTTGCGAAGCTGAGGGAGTACAAATCTGACCTCAACAATCTCAAGAGTGAGCTTAAGAGGATCTCGGCGCCCAATGCAAGGCAGGCTACACGGGAGGAGCTCCTTGAGTCAGGCTTGGCTGACACTCTCGCGGTGAGCTCCATGATTTGTATTACTAGCTCAATTTGACCATATTGCAGATTTTAATAATTGGCAGCATCTAGTTTTGTTTGTCCATTGTGTTGCTGTAGTTTGTAGTTTTAATCTATATCACAATAGGTGTTTTACGTATGTCACGGGCACAAACGACTGACAGGTAGCATTCATGAGCTCATAATCACTGATACTAGCTGTACTTATATTTTTTAATTGTGATACTTGTTATTGGATGGTTAATTGAGGCTGAATTAATGGTGGTTATTTTCTTTTTTTTCCCCCAAATCTGTACCATTTATGTATGTATCACTGACAATTTAATGGTTCTTAAGTTCTGTATTGGTATGTGATTAATAGTGTTATGCTGAACTTCAGTTAGAATAAGGTATTTAAATATTTTAATATTTGTGCAATCTGGATTTTAGTTTTGTCATTGGATTTAAAACCTTTAAACAATGAGAGCTTCATTTTGTAACATGTTCTTGCCACTCTTAAGGTTTTTCCTATATGTGTTTTTTGTGTCTGTTACATGGCAACGTTGTAATTCAGTAGGAGTGTATATCATCAGTTTATTTCCAGTTGTGGTTTATTTTCAGATCTGGACCCTTACTGTCACCATTATCAACTGTACTACAGATTTCACACAATCTCAATGAGTTCTCTGTAACTATTTTGTTTTGAAATTTCCTACATAATTTTCTCATTCATTTGTTAATGTGGACACAATTGACAGATGTGTATTATACAAGATATTTCCATTCTGATCTTCATGGTACAATTCTGTAGTCACATGAGTAGTGAGAACTGTTTCTTGTCAAATTTGTGTGGTCCAATTTGGTCCTTGATGAATATCCGTTGTTCTGATTAAAAAAAAATGCTGATCTGTCAGGAGAATAGGAAATCGGAGTTAACACCCTCAGAAACTGTCCTTTCTACTTTCAGTAATCTGCTTAATGTTTTTGCGAAATGAATACATTATCCAGCCAATGTATTCCTGGATGTTGAAAAGCTTTTGGGAATGCTACCTTTGCATTCTTTGTCCGTCATATTTTTCTGCTGATATAATATCTTATATCATAATGCCTCAGCATTACATTGATTCTGATTTCTTAAACATTCTCTCAAAGTTAATGCCGTTTTTTCTTTTGTTGTTTTTCATGTTGTAACTGGGATTATTATGTAAATCAGGCGTCTACTGATCAGAGGGGAAGATTGATGATGACAACAGAAAGACTGAATCAGTCCAATGATAAGATTAAAGAGAGCCGAAGAACCATATTGGAGACAGAAGAACTTGGTGTGTCAATTCTTCAGGATCTTCATCAACAACGGCAGTCACTGCTGCACGCTCATACTACTGTACGTATTCTGTCATAACCTTTTTACACATTTATTGGATTTGCCTTCCTATTAATGTCATATTCATTCGTCTTCTGGGCATGTCTTATGTTTATTATTTGAACCATCCTGTGTTGTCTGGTTTTACAGGTAAATATGGCATAGGAATACTATTACTTAGGTTCTAGATTTGTTGCTTTGCTCTATCTTGGAGAATTGGCTTTTTAGCAAGTTAAGGTTGCCTTTTGCTTGGCTTTTAAAGTTGACCCAATTAATTCCTTGTTTGGTTTGGAGGTGATTCTACAATAGGTGTGAAATAAATCCTCTCCAATCCCTCCTCCCTCTTGGGGATTAACCGAACAAGGCCTAAAGGAACCTACCAACCACCACATCAAAAACCACTTACAAGTTAAAACAAAATATAAATACTTCATTGTTTATACTCTTGAATGCAAAGAGCAAACAGTAGACGATGCATATGCATGCAAAGCCATGGTCGACGATTCATTGTTGAAGTGAATACTGGAAAATTCCTGTATAAAAAATGTGCTATCCAAAATATTTGCAGCAAGATTCACATCATTAACAGTAATAGATTTAGCTGCAAGCTAATGGCAACAGTAATCATGCAATGCAGTCTACTTATTTCATATATGTTAATGGCGTCATTTTTCTCACAGTTGCATGGGGTTGATGATAATGTTGGCAAGAGTAAAAAGATCCTGGCGGCAATGTCAAAGAGGATGGACAGGAACAAGTGGATCATTGGGGGGATAATTGCAGCTCTTGTTCTAGCCATCCTTCTCATACTGTACTTTAAGCTCGCTTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004299