BGIOSGA004335

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Revision as of 11:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004335| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004335, complete gene.| tag = OsI_035...")
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Gene Name

BGIOSGA004335

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004335, complete gene.

LocusTag

OsI_03516

Ensembl Transcript ID

BGIOSGA004335-TA

Ensembl Protein ID

BGIOSGA004335-PA

Length

5327

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33062701..33068027

Sequence Coding Region

33062701..33062730,33062870..33062990,33064093..33064164,33064559..33064604,33064880..33064984
,33065093..33065861,33066995..33067024,33067115..33067257,33067805..33068027

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33062701..33068027 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33062701..33068027 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGCGCAAGGGAAGGAAGCAGAAGCAGCTGTGGCCGAAGACGGTGCTTCGGAAATGGCTCAACATCAGGTCGCCGGAATCCGACTTCAGCGCCGACGAGGGCGAAGCCACCGGCGACGACGACACCGATAGCGAGTTCGAGTACGAAGAAATGTGCCATTGGGAGCGCCAACTATATGATGAGGAGAGGAGACTGCGTGGTTTGGGCGCTGAGACAATTGATAGCCAAATGGAGGGTGCTCCCTACAAGCTTAATAGAAGGCGCAAGGTCTGCGTAGGAACATGGAATGTTGCAGGAAGACTTCCACCTGATGACTTGGATATTCAAGATTGGTTGGATATGGAGGAGCCAGCTGATATTTATGTTCTTGGATTTCAAGAAATTGTTCCATTAAATGCTGGGAATATATTTGGTGCTGAAGACAACCGTCCTGTCGCAATGTGGGAACATATCATTCGTGAAACATTGAATAAGATTAGTCCTGATAAACCAAAATATAAATGTCACAGTGATCCTCCTTCTCCATCAAGGTTCAAGCCTTCTGACGATGTGGAAGATGAACTTGTTAGTGAATCTGACAGCGAAAGTGGCGGGGAAGTGCACCCATGGAATGAACAAGATTTTACCGTTGATGATGACAGTGTTCATAGTAATAAATATGAGCACTCTACTTCTGGTCCTACTGAAACTACCGTAAATGGAAACAACTTCAGCAGGGTGCCTTCAATGAAGATTTTCGATAGATCACACAACTTAAGTTTTAAAGACTATGTATCTAGTTTGGAAGAGCCAATCCATCAAAAAATGTTAACTAAAACACTCAGCTACTCAGAGAGGCTTGGAATGATTTGGCCTGAACAACCGTTGGATATATTGACCCAGCGTCTTCCAGACATCACGAAACCATTTATTTCAGAGAAGGCACTGAGGTCATGTTTGTCTTTCAAATCAGCACATGGAGATTCCAATGCTTTTCCAGATGATTGTTTAGTTCATGATTTTAACATCAAAAGTGCACTAGTCAAAACGAAAAGACCATACTTCGTAAGGATAATAAGCAAGCAGATGGTTGGAGTTTTTATTTCAATATGGGTACGAAGAAGCCTGCGGAAGCATATTCAAAATTTGAAAGTATCAACCGACTGGAATGGTTTGTTCCAGAATGACCAGCTAAAACGAGAATTTAAGAAAGGGCATTTATTTGATGGGTGGACTGAAGGAGTTATCAGCTTTCCCCCGACATACAAGTACAAGGTTAACTCAGAGAAATACACGAGTGATGAGCCAAAATCTGGAAGGAGAACACCTGCCTGGTGTGACCGAATTCTTTCCTTTGGCAAGGGAATGAGGCTGCAGGCCTACAGGACAGTTGATATCAGGCTATCCGATCACCGCCCTGTGACAGCTGTGTACACTTCCGATGTTGAGGTTTTCTGTCCCAAAAAGTTGCAGAGAGCTCTTACCTTCACCGATGCAGAGGTTGAGGACCAATTCTCATTTGAGGAAGAGAGCACTTCTGGAATCTTTAGCTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MRRKGRKQKQLWPKTVLRKWLNIRSPESDFSADEGEATGDDDTDSEFEYEEMCHWERQLYDEERRLRGLGAETIDSQMEGAPYKLNRRRKVCVGTWNVAGRLPPDDLDIQDWLDMEEPADIYVLGFQEIVPLNAGNIFGAEDNRPVAMWEHIIRETLNKISPDKPKYKCHSDPPSPSRFKPSDDVEDELVSESDSESGGEVHPWNEQDFTVDDDSVHSNKYEHSTSGPTETTVNGNNFSRVPSMKIFDRSHNLSFKDYVSSLEEPIHQKMLTKTLSYSERLGMIWPEQPLDILTQRLPDITKPFISEKALRSCLSFKSAHGDSNAFPDDCLVHDFNIKSALVKTKRPYFVRIISKQMVGVFISIWVRRSLRKHIQNLKVSTDWNGLFQNDQLKREFKKGHLFDGWTEGVISFPPTYKYKVNSEKYTSDEPKSGRRTPAWCDRILSFGKGMRLQAYRTVDIRLSDHRPVTAVYTSDVEVFCPKKLQRALTFTDAEVEDQFSFEEESTSGIFSF</aaseq>

Gene Sequence

<dnaseqindica>1..30#170..290#1393..1464#1859..1904#2180..2284#2393..3161#4295..4324#4415..4557#5105..5327#ATGCGGCGCAAGGGAAGGAAGCAGAAGCAGGTGAGCGCCGCGCTAGCTAAAGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGATCGGAGTTTCATTGCTCGGGGGCTAACTGATGCGTTTGGTCGGACGCGACGCGGGGCATGCACACAGCTGTGGCCGAAGACGGTGCTTCGGAAATGGCTCAACATCAGGTCGCCGGAATCCGACTTCAGCGCCGACGAGGGCGAAGCCACCGGCGACGACGACACCGATAGCGAGTTCGAGTACGAAGGTGATCTAGACCCTCTCCCTCTCTCTACCACATGGGCTTCATTATTGCAAAATAAAAATAAAAAAAAATCGAAACCAAAATTCGCTGTGAAGCTCAATGGATCGGGAAATGCATTCGGGTTTTGGTTCAACCACTGGTCCCTCGTCTCCAGAATTGATCTTTTTGTCCATCATAATTCTTTGGAAAAGAAAAGTTGTGGACCAGAAGAATGCATCGATTGGTTTGGTAGGTGGATGTTTTTGCTTACAACCAATAAAGATGAGAGCTTTGACGGTTGCTTCTTTCAACTTGAGCTGGTCCAGTTAGCACTTAGCACAACCGTAAGATTCTGGTATTTCAGGGGGGAAAAGGATAGGAAGTGGAAGGGGAGTTAACGAAATTTGGAGATGCCTTTCTAACCTTGCTCATTAGAGCAAGTTTAATAGTAGAGCTTACTCCTTACTAAATTCATTGTAGAACTAACATGTATAATATATTAGCTACGAGGTTAGCTCTATTTGTTTTCCTCCTCTTTCTTTCCCTCACCACGAAGTTAATGCATATTTTTGGAGCATGTTTAGAGCTAGCTTTTCTATGAGAGTCACTCAATTTTTTCTCTCCCTTCCACTTAAGCATATAGCTTTCTTATAACTCACTACTATCCTCCTCGCTCTTAAAAAAAGTAGAGGTGGACTGTATTGTTCTTTTGGTTTCTTGTGGTGGTGTATTCCCAACTCCTAGGCTATTCCTTTGGTTTGTTTATTCCTCCGTTTACCTAGAACAAAAAAACAAAATTAGACGTTGAATTCAAAGAATGTTAAAACCAATGTTTCTTTTGTTTAGTGAATTTCAAAACGACAAGCTCTCCCATCCTATTCCTAAGATAGTATACTAGTACAATCTTTCTAAAGGAAATAAGGAAAAAAAATGAAAGGACATCTGAATCTGACGGCCATAAATACATTTGCCGCACATGTATGCTGACAAAAAGCAGGCAGCTTTAAAAAAGGGAAAACAAGTGTAAATTTTGCACTTAAATTTGTTGGCTACGGCATATGCATGTTCAGTTCTTTTTCAAAAATTGGTTCTAATAATAGTTGAACTTATAATGGGATTTGTGCAGAAATGTGCCATTGGGAGCGCCAACTATATGATGAGGAGAGGAGACTGCGTGGTTTGGGCGCTGAGACAATTGGTATTTATTTGATTCGCATAATTATTGTGTTCAACACATTCATCGGCAAAAGGGTTATTGACAAAGCATCACATGAAAAATTTGAACTACATATCACCAACGAAATAAGTTACTATATTAATCACAGTAGCAAACTTCTTTTTTTCTGGATGCTTATTTCCAGGTTTTGTTTAATAGTATGTTTTCTTCTTTGTTTTGCCACACACTGAAAATTGTGAAATACGGTGTTGATTCTGCCAAACTAAGAGATACTACATGGTACATACTAGTCCACCCTTTCACCAATTTTCGATGGGAACTAGTACTACCTCTTAAGCACCTCTGGCATACACATCCTATCAGAGAAAACCCAGGTAGCTTCCTTGTGCACTGACGAAGACTATCAAATCTTCAGATAGCCAAATGGAGGGTGCTCCCTACAAGCTTAATAGAAGGCGCAAGTCAGAGACCCTTCGTGCCCAATATATCGACATTAAGGAACTCAGGCATGCATTTGTTCTCCCTTCAGATTATCTGGACTTGCCTAGTTGTTTGTTCACAGTATTTTCCGTAAGAATTTGCTTCAGATAAGCTAAATGACTTGGTTTGTTCCTCAATATATTTATCTTTCCTAGCACAAGAATAACCCCTTAAGATCAAGCCTAATTGCAGCTGAAACCTATAAAATCTACTGCCGTTCTGTCACTATTCCTTAAAATGTTGGTTTGATATGCAGGGTCTGCGTAGGAACATGGAATGTTGCAGGAAGACTTCCACCTGATGACTTGGATATTCAAGATTGGTTGGATATGGAGGAGCCAGCTGATATTTATGTTCTTGGGTAAATTGTTGCATCCCATCTTGTTACTTATTCATATTACACTATGACTGATATTTCTCCTTTTTATTTTTTTCACCTATTAAACAAATTGAACTTATTATCTTTTAGATTTCAAGAAATTGTTCCATTAAATGCTGGGAATATATTTGGTGCTGAAGACAACCGTCCTGTCGCAATGTGGGAACATATCATTCGTGAAACATTGAATAAGATTAGTCCTGATAAACCAAAATATAAATGTCACAGTGATCCTCCTTCTCCATCAAGGTTCAAGCCTTCTGACGATGTGGAAGATGAACTTGTTAGTGAATCTGACAGCGAAAGTGGCGGGGAAGTGCACCCATGGAATGAACAAGATTTTACCGTTGATGATGACAGTGTTCATAGTAATAAATATGAGCACTCTACTTCTGGTCCTACTGAAACTACCGTAAATGGAAACAACTTCAGCAGGGTGCCTTCAATGAAGATTTTCGATAGATCACACAACTTAAGTTTTAAAGACTATGTATCTAGTTTGGAAGAGCCAATCCATCAAAAAATGTTAACTAAAACACTCAGCTACTCAGAGAGGCTTGGAATGATTTGGCCTGAACAACCGTTGGATATATTGACCCAGCGTCTTCCAGACATCACGAAACCATTTATTTCAGAGAAGGCACTGAGGTCATGTTTGTCTTTCAAATCAGCACATGGAGATTCCAATGCTTTTCCAGATGATTGTTTAGTTCATGATTTTAACATCAAAAGTGCACTAGTCAAAACGAAAAGACCATACTTCGTAAGGATAATAAGCAAGCAGATGGTTGGAGTTTTTATTTCAATATGGGTACGAAGAAGCCTGCGGAAGCATATTCAAAATTTGAAAGTATCAACCGTAGGTGTCGGTGCTATGGGTTATATTGGTAATAAGGCAAGTTCCCGTGAAGCACATCATTCTCAATTCCTTTAGCAATTCCAAATATGTAGAAAACAATTAGCATTCCTTTTTTTGGATAATAGAAATGGTTTACATCTCCGGCCTCTACTGTTAGGCACAGCCAAAATTAGCATTCTTTTATACTATATTTGTTTTCTTAATGATCATATTACACTTTCGTTTTAGCACCTAGTTTTGTGCACTTTGGTCGTACCATCTCATGTACATTTACTATGCGCTGGTAAGTCAATGTGCTATTTAGAAAACAATGGGCTAATTTTTCTTACTTGACATGCTCCAGGGATCAATAGCAGTAAGCATGTCCATTTATCAAACACTCTTTTGCTTTATATGTTGCCACCTGACCTCTGGAGAAAAGGATGGAGATGAACTGAAAAGGAATGCTGATGTGCAAGAAATCCATCGAAGGACAATATTTAATCCGGTTTCCAGAGTTAGCATGCCTAAGACTATATATGACCATGAGTAAGTACGTAAACTTGCAACTCTAAAACACTAGAAGCTCAGTACGCAATTCCTAAAGCTCTAGCTAAACTAAGCATGTTTTTATCCATGCCATTTGATACTCTTTTGGAGATGATGGCTCAATTTCAGTTTAGATTGTGTTTGGCGTCACTGTTTACTTGTTTAAATATGATGGGATAACAAGGGATAAATGATTAAAGTGAATCTGTGCATATTATTGGCAAAAATCACATAATGAAGCAGATGATGGCTCAATTTCAGTTTAGATTGTGTTTGGCGTCACTGTTTACTTGTTTAAATATGATGGTATAACAAGGGATAAATGGTTGAAGTGAATCTGTGCATATTAGTGGCAAAAATCACATAATGAAGCATGTGTTCGAGGGTTGCACACATTTGAAATTTTTCTTATACTTCTTTTGTTCATTTTAGTTTTATTTGATCAAGAATTGCAGGAAACATTGCTTATTAGTTTATATAAATCTTATCAGTTTGTCTAATATTTTTATTTTCTTGAATATTTCAGAAGGATAATATGGTTAGGAGATCTCAATTATAGGATCAACTTATCATATGAAAAAACACATGAATTCATATCCATGAAGGACTGGAATGGTTTGTTCCAGAATGACCAGGTAAAGTTTTGGCAGCAGTGCAGCATCTTGTGACATACTCCTACTACTTTATAAATACATAGTACCTCACTGTTTTCTACTCTATGATAGCTAAAACGAGAATTTAAGAAAGGGCATTTATTTGATGGGTGGACTGAAGGAGTTATCAGCTTTCCCCCGACATACAAGTACAAGGTTAACTCAGAGAAATACACGAGTGATGAGCCAAAATCTGGAAGGAGAACACCTGCCTGGTATGCTAATCTGATCATTCGTAACTTGATCTGCATACGCTCTTCATTTTTTTTTTATCCTGTCCTTTCTTAATACTCCCTCCGTCATAAAATACTTGTCTTTCTAGCATTCAAAAGTTGTCCTAAAATAGTTATCACTTTGAAGTATTACTTGTCACATCAACCACTTACAATTCAAATTTCTCACCATTCTACCCCTCAACTATAATCTCAGATCCACCTATACATTACTACTATTTAATAAGAGGTATTGTAGTATTTTTTTTCTAACCCTAATACATGCTAAACAACCTAGAATGGGACGGAGGTAGTAACATTTTTCCTCGTTGTTTACACGATTAATCACCTCATAACTCATGAAGGTGTAAGAGGTATTGTAAGAGGTATTGTGTAAGAGGAAAGAATTGGTCCTCATAACTCACGATTAATCACCTCATTACTACTATTTAATAAGAGGTATTGTAAGAATTGAGGTTGTGTATGAGGAAATCTCTAAGTTGCGATGAGCGATGCGTGCTAACAAAAAAAATATTGTTTAACTTTGTAGGTGTGACCGAATTCTTTCCTTTGGCAAGGGAATGAGGCTGCAGGCCTACAGGACAGTTGATATCAGGCTATCCGATCACCGCCCTGTGACAGCTGTGTACACTTCCGATGTTGAGGTTTTCTGTCCCAAAAAGTTGCAGAGAGCTCTTACCTTCACCGATGCAGAGGTTGAGGACCAATTCTCATTTGAGGAAGAGAGCACTTCTGGAATCTTTAGCTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004335